| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962749
Identifier: 157962749
GI number: 157962749
Start: 3589524
End: 3590465
Strand: Reverse
Name: 157962749
Synonym: Spea_2931
Alternate gene names: NA
Gene position: 3590465-3589524 (Counterclockwise)
Preceding gene: 157962750
Following gene: 157962748
Centisome position: 69.39
GC content: 47.24
Gene sequence:
>942_bases ATGAACACAAACCAAACTCATACAACTCACATAACGAATACAAGTGAGCAAAAGTGGACCTTGGCGCAATTAGCGCGAGT TGCACTATTAATGCTGCCTATGACGCTAGTGCAGTCTGCCAGTGCCAGTTCGGATATGAGTATGCTTTCGCAGCCGCAAA GCACCTCGGTTGCACAAACTGTTTCCAGTGACGACCAAAGTTCTCAAGCCGCTCAAGACGGCAATACCTTATCTGAGCTG CAAATCAGCAAGCTCGAACTGCAGCGAGTTAAGCAAACGCAGTTACAGGCGATGCAGACAACAGGCACTACTAGCCCAGA GCCACTTACTCGAGAAAAACTGACCCGTGAGCAAATAGTCCAGTCCCATATCGACAAGGCGATGCAGGCGAATTTTGAGT TAGCCAAGAGCGGTTCGGTTAAGCAGTTTGCTAATGGCATTTATCGTGATTTTTATATCTACGATGCTTATAGCCGTTTA TTTGTCGATAACGATTACGACGGCTTCTATCAGACCTTTAGCGTGACCTTCGACGCCGATGTAGAGGGTTATTATGCTAA TGAGCGTGCAGACGTGTTTGCCGAGCTATACCTGAGTCGCAACGGTGGGCCCTGGGAGCATTACTACACCACAGATATCT TCAGGATTGTTGGTAATGCTACCGATGATGACTTTGAAGTGTTAACGACGCTGGAGTCTGGTTACCGAACCGATCATTAC GATGTGCTCATCGATCTCTATGAGGTGGGCTATGGCGATATTGTGGCTACGGTAAGCTCAAATGATTTCGACAGCTTATA TGCGCTGCCGCTGGAGAGCCGTGATAGAGACGATTACTACATTGAAGAGGATTACCATGGCGGTAGCGTGTCAATAGCTA TGTTGTTAATGCTCCTTACGCTGCTATGTTACCGACACTCTAGTGCGTTGAAAAACAGGTAA
Upstream 100 bases:
>100_bases CTCAGATATGGATGAAGCGCATCCGCTTCATAACGTTCAGCTTGTGTTCACACTCAGTGGACTCTAATGGCCTCATTAAG CATGAATTTTCGAGGTGAAG
Downstream 100 bases:
>100_bases TTGCGATAAGTGTTTCACAGTCTAGCCTTTGCAAACTGAATGTCAGCGTAATATTTGAGTATCGATTGCCGTTCCCGTTA AGTTATTGGCTCGCTGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MNTNQTHTTHITNTSEQKWTLAQLARVALLMLPMTLVQSASASSDMSMLSQPQSTSVAQTVSSDDQSSQAAQDGNTLSEL QISKLELQRVKQTQLQAMQTTGTTSPEPLTREKLTREQIVQSHIDKAMQANFELAKSGSVKQFANGIYRDFYIYDAYSRL FVDNDYDGFYQTFSVTFDADVEGYYANERADVFAELYLSRNGGPWEHYYTTDIFRIVGNATDDDFEVLTTLESGYRTDHY DVLIDLYEVGYGDIVATVSSNDFDSLYALPLESRDRDDYYIEEDYHGGSVSIAMLLMLLTLLCYRHSSALKNR
Sequences:
>Translated_313_residues MNTNQTHTTHITNTSEQKWTLAQLARVALLMLPMTLVQSASASSDMSMLSQPQSTSVAQTVSSDDQSSQAAQDGNTLSEL QISKLELQRVKQTQLQAMQTTGTTSPEPLTREKLTREQIVQSHIDKAMQANFELAKSGSVKQFANGIYRDFYIYDAYSRL FVDNDYDGFYQTFSVTFDADVEGYYANERADVFAELYLSRNGGPWEHYYTTDIFRIVGNATDDDFEVLTTLESGYRTDHY DVLIDLYEVGYGDIVATVSSNDFDSLYALPLESRDRDDYYIEEDYHGGSVSIAMLLMLLTLLCYRHSSALKNR >Mature_313_residues MNTNQTHTTHITNTSEQKWTLAQLARVALLMLPMTLVQSASASSDMSMLSQPQSTSVAQTVSSDDQSSQAAQDGNTLSEL QISKLELQRVKQTQLQAMQTTGTTSPEPLTREKLTREQIVQSHIDKAMQANFELAKSGSVKQFANGIYRDFYIYDAYSRL FVDNDYDGFYQTFSVTFDADVEGYYANERADVFAELYLSRNGGPWEHYYTTDIFRIVGNATDDDFEVLTTLESGYRTDHY DVLIDLYEVGYGDIVATVSSNDFDSLYALPLESRDRDDYYIEEDYHGGSVSIAMLLMLLTLLCYRHSSALKNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35401; Mature: 35401
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNQTHTTHITNTSEQKWTLAQLARVALLMLPMTLVQSASASSDMSMLSQPQSTSVAQT CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHH VSSDDQSSQAAQDGNTLSELQISKLELQRVKQTQLQAMQTTGTTSPEPLTREKLTREQIV HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH QSHIDKAMQANFELAKSGSVKQFANGIYRDFYIYDAYSRLFVDNDYDGFYQTFSVTFDAD HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHEEEEHHHHHEECCCCCCCEEEEEEEEECC VEGYYANERADVFAELYLSRNGGPWEHYYTTDIFRIVGNATDDDFEVLTTLESGYRTDHY CCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH DVLIDLYEVGYGDIVATVSSNDFDSLYALPLESRDRDDYYIEEDYHGGSVSIAMLLMLLT HHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH LLCYRHSSALKNR HHHHHHHHHHCCC >Mature Secondary Structure MNTNQTHTTHITNTSEQKWTLAQLARVALLMLPMTLVQSASASSDMSMLSQPQSTSVAQT CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHH VSSDDQSSQAAQDGNTLSELQISKLELQRVKQTQLQAMQTTGTTSPEPLTREKLTREQIV HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH QSHIDKAMQANFELAKSGSVKQFANGIYRDFYIYDAYSRLFVDNDYDGFYQTFSVTFDAD HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHEEEEHHHHHEECCCCCCCEEEEEEEEECC VEGYYANERADVFAELYLSRNGGPWEHYYTTDIFRIVGNATDDDFEVLTTLESGYRTDHY CCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH DVLIDLYEVGYGDIVATVSSNDFDSLYALPLESRDRDDYYIEEDYHGGSVSIAMLLMLLT HHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH LLCYRHSSALKNR HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA