| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is nitA [H]
Identifier: 157962682
GI number: 157962682
Start: 3495733
End: 3496677
Strand: Reverse
Name: nitA [H]
Synonym: Spea_2863
Alternate gene names: 157962682
Gene position: 3496677-3495733 (Counterclockwise)
Preceding gene: 157962685
Following gene: 157962674
Centisome position: 67.57
GC content: 47.51
Gene sequence:
>945_bases ATGAAAAAAGTCGCAATTATTCAAGAGGCGCCCTGTGTGCTAGATAAGAAAGCAACGATTCAAAAAGCCGTAGAAATTGT TCATTCGGTATCAGAAAAAGGTGCTGAACTTATTGTTTTCCCTGAGGCATTTATTCCAGGATACCCAGCCTGGATATGGC GCTTAAGACCTGGGGCGGACTGGGGCGTGAGTGAAGCCTTACATACGCGTTTGCTACAAAACTCGGTGGATATGTCATCG GATGATCTTAAGCCGCTATTAGAGGCGGCCAAACAGAGAGCTGTGACTCTAGTTTGTGGGTTAAACGAGCGAGATAATGC TAATAGCCAGTCGACCATCTATAACACCGCCATCACTATCGATCCCCAAGGGAAAATCGTTAACCATCACCGTAAGCTTA TGCCGACGAATCCGGAGCGTATGGTTTGGGGCTTTGGTGATGGCCATGGGCTAAACGTGATTGCTACGCCAGTAGGAAAA ATAGCGAGCCTCATATGCTGGGAAAATTATATGCCACTGGCGAGGTACGCCCTATATTCACAGGGGGTAGAAATATATAT CGCACCAACCTATGACAGCGGTGAAGCTTGGATTGGCACTATGCAGCATATTGCTAGAGAGGGAAAGTGTTGGGTACTGT GCTGTGGTGTCGCGCTGCAAAGAAAAGATCTACCAGAAGACTTTCCCGATCTCGATAGACTCTACCCGGCAGATGAGGAT TGGATTAATCCCGGAGACTCGCTCATCGTCTCCCCAAATGGCGAAATCATGGCAGGCCCCATGTCTAAAGAGAAGGGCTA TTTACTGTTAGATATTGATGTGGCAAAGGCGGCTAGCTCAAAGCGGGCGCTGGATGTTGCAGGGCATTATTCTAGGCCGG ATGTGTTTAAATTAGAAGTCGATAAGTCTCGTCAGTCACCAGTCAGCTTTAAGAATCAGAGCTAA
Upstream 100 bases:
>100_bases ATATGCTGGCTAGCCTCGAGTTAAAACTTTCTGGCGCCATCCTTTTAATACGTCAATGAACACGCCATTAACTAAACCGT TCATTACAAGGGAGCAAATC
Downstream 100 bases:
>100_bases CTAAGCGAAACTTACTCAGCAGTGTTAACTTTTGCGTGAGAGCACCTTTTATACCAGTTTCCCATTAGTGAACTAGGTGT TAGATTAAGGCAGGATGTAG
Product: Nitrilase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKKVAIIQEAPCVLDKKATIQKAVEIVHSVSEKGAELIVFPEAFIPGYPAWIWRLRPGADWGVSEALHTRLLQNSVDMSS DDLKPLLEAAKQRAVTLVCGLNERDNANSQSTIYNTAITIDPQGKIVNHHRKLMPTNPERMVWGFGDGHGLNVIATPVGK IASLICWENYMPLARYALYSQGVEIYIAPTYDSGEAWIGTMQHIAREGKCWVLCCGVALQRKDLPEDFPDLDRLYPADED WINPGDSLIVSPNGEIMAGPMSKEKGYLLLDIDVAKAASSKRALDVAGHYSRPDVFKLEVDKSRQSPVSFKNQS
Sequences:
>Translated_314_residues MKKVAIIQEAPCVLDKKATIQKAVEIVHSVSEKGAELIVFPEAFIPGYPAWIWRLRPGADWGVSEALHTRLLQNSVDMSS DDLKPLLEAAKQRAVTLVCGLNERDNANSQSTIYNTAITIDPQGKIVNHHRKLMPTNPERMVWGFGDGHGLNVIATPVGK IASLICWENYMPLARYALYSQGVEIYIAPTYDSGEAWIGTMQHIAREGKCWVLCCGVALQRKDLPEDFPDLDRLYPADED WINPGDSLIVSPNGEIMAGPMSKEKGYLLLDIDVAKAASSKRALDVAGHYSRPDVFKLEVDKSRQSPVSFKNQS >Mature_314_residues MKKVAIIQEAPCVLDKKATIQKAVEIVHSVSEKGAELIVFPEAFIPGYPAWIWRLRPGADWGVSEALHTRLLQNSVDMSS DDLKPLLEAAKQRAVTLVCGLNERDNANSQSTIYNTAITIDPQGKIVNHHRKLMPTNPERMVWGFGDGHGLNVIATPVGK IASLICWENYMPLARYALYSQGVEIYIAPTYDSGEAWIGTMQHIAREGKCWVLCCGVALQRKDLPEDFPDLDRLYPADED WINPGDSLIVSPNGEIMAGPMSKEKGYLLLDIDVAKAASSKRALDVAGHYSRPDVFKLEVDKSRQSPVSFKNQS
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17557111, Length=316, Percent_Identity=39.2405063291139, Blast_Score=219, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6322027, Length=202, Percent_Identity=38.1188118811881, Blast_Score=135, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000132 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.5.7 [H]
Molecular weight: Translated: 34787; Mature: 34787
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00920 NITRIL_CHT_1 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAIIQEAPCVLDKKATIQKAVEIVHSVSEKGAELIVFPEAFIPGYPAWIWRLRPGAD CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCEEEEEECCCCC WGVSEALHTRLLQNSVDMSSDDLKPLLEAAKQRAVTLVCGLNERDNANSQSTIYNTAITI CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEEEEEE DPQGKIVNHHRKLMPTNPERMVWGFGDGHGLNVIATPVGKIASLICWENYMPLARYALYS CCCCCEECCCHHCCCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHH QGVEIYIAPTYDSGEAWIGTMQHIAREGKCWVLCCGVALQRKDLPEDFPDLDRLYPADED CCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCHHHCCCCCCC WINPGDSLIVSPNGEIMAGPMSKEKGYLLLDIDVAKAASSKRALDVAGHYSRPDVFKLEV CCCCCCEEEECCCCCEEECCCCCCCCEEEEEEHHHHCCCCCCEEEECCCCCCCCEEEEEE DKSRQSPVSFKNQS CCCCCCCCCCCCCC >Mature Secondary Structure MKKVAIIQEAPCVLDKKATIQKAVEIVHSVSEKGAELIVFPEAFIPGYPAWIWRLRPGAD CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCEEEEEECCCCC WGVSEALHTRLLQNSVDMSSDDLKPLLEAAKQRAVTLVCGLNERDNANSQSTIYNTAITI CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEEEEEE DPQGKIVNHHRKLMPTNPERMVWGFGDGHGLNVIATPVGKIASLICWENYMPLARYALYS CCCCCEECCCHHCCCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHH QGVEIYIAPTYDSGEAWIGTMQHIAREGKCWVLCCGVALQRKDLPEDFPDLDRLYPADED CCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCHHHCCCCCCC WINPGDSLIVSPNGEIMAGPMSKEKGYLLLDIDVAKAASSKRALDVAGHYSRPDVFKLEV CCCCCCEEEECCCCCEEECCCCCCCCEEEEEEHHHHCCCCCCEEEECCCCCCCCEEEEEE DKSRQSPVSFKNQS CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400390 [H]