| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962669
Identifier: 157962669
GI number: 157962669
Start: 3478141
End: 3479472
Strand: Reverse
Name: 157962669
Synonym: Spea_2850
Alternate gene names: NA
Gene position: 3479472-3478141 (Counterclockwise)
Preceding gene: 157962670
Following gene: 157962668
Centisome position: 67.24
GC content: 43.62
Gene sequence:
>1332_bases ATGCAGCATAACCAAATAGTTGCCAAGCATATTGCCAAGTTACGCAGTGATGTAGATGCAGCTAGTTCACAAGATGATCT GCTCGATATCATCACTCAAGTTAAACATCATCCTGGGCCGTTAGATTACCGCGATAAGATCACCCACGGGATTAAGTGGT TACTGATCAGCGCTAGCGTCTTGTGTATCGTCTTCATCTTTATGCGCCTCTGGTATGAACAAGTTGAGCCATTAGCTAAG TTAGTGATTGATTACTCTTGTTATTGGCTTCCAGTAGCGCTGAGCACATTGTTAGTCAGTTTTTGCCACGAGCGCGGATG GCTACCAATACCCGTGCCGGTTAGCTTTGCTTTGCTGGTGGCGGCAATGGCTCTGGTGACAATATATGTACCTGAATGGC CAGAAGCCTATTGGACTGCGCTGCGTATTTTTGGCTATGTGATTAGTGTTGGAGAAATTGACAACCAGCAGTTTGCGTTG TGGTTTATTCTGATCATCACCAGTTCAATCACCTGGGTATGGTTAGATTATCGCGCTAATTGGCGTAAACATCTTTCCGA TAAAATATTCCTCTGTGACGCGTTATTTAATAATGGCTTAACACAGAGTAAGCCTGCACCCGAAGACAAACTAGATGCAC TTGTAAAGCAGTTTGCAGAGTTTCGTCGCGGTAGTGGCACGCGTGATATAGAGCAGATGTTTGAGGGGCAATATCAAGGT GAGCAGCACAGCTTTAACTATAAGCTTTATCACTTTCAATATACGGTAAAACGCACTCAAACTAGTTCTGATGGTAATGG CGGTTATAAAACCAAAACCGTGCATGAGCATCGGGACCGTTACGGTATGTTGCTCGATTTTCCATTCGCTAACGGTTTGT GCCTAGATGCTGAAGACGAGGTAAAGCTTAAAGGTTCGGTTTATCAAGAAAAGTATCAAACAGAGTCAAATGCATTTAAT GACATTTATCGAGTACAGGCCTGCGATAAACTCACCGCAGCACGCTTTTTAACGCCCGCAATGATAGAAACCTTACTCGA TCTCAACCGCAATTTTATCTCGCCTATGGTAGAGATCGCCCCCGATGGCCGTTTGTGTATAGCCTCTACCAGTAAGCTGA TTATTGAAAAACGTAAACATTCACTGGCAAAGCCAGATGAATTTTATAAGGAAATTGCCGGCCATACCGAGTTAAAGCGG GTGCAAAAACTGCTTGCAGCGATCCATGAGCTTATGCGTCTGTCGGATAACAATTTTGTAAGTGATGCGAATAAAACAAC TGACTCAACGCAATTAAATGATAGGGAGATCAACACTCATGCTGGCTTATAA
Upstream 100 bases:
>100_bases CGCCTTTCATTATAATCCCCGTTTATTATACGGCTCTAAATCTAACCTTGTGCATGTAGTAAAAGGATAGAAGTAAAAGG AAAGTGGTAAAGGACACACA
Downstream 100 bases:
>100_bases CGCTCAAGTGACTCGCAATATTGCGGCTATTCGCGGTGATGTTGAAGCAGCAAAAAGCCAAGATGACTTGATAGCATTAG TGCATCGAGTCGAGCACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MQHNQIVAKHIAKLRSDVDAASSQDDLLDIITQVKHHPGPLDYRDKITHGIKWLLISASVLCIVFIFMRLWYEQVEPLAK LVIDYSCYWLPVALSTLLVSFCHERGWLPIPVPVSFALLVAAMALVTIYVPEWPEAYWTALRIFGYVISVGEIDNQQFAL WFILIITSSITWVWLDYRANWRKHLSDKIFLCDALFNNGLTQSKPAPEDKLDALVKQFAEFRRGSGTRDIEQMFEGQYQG EQHSFNYKLYHFQYTVKRTQTSSDGNGGYKTKTVHEHRDRYGMLLDFPFANGLCLDAEDEVKLKGSVYQEKYQTESNAFN DIYRVQACDKLTAARFLTPAMIETLLDLNRNFISPMVEIAPDGRLCIASTSKLIIEKRKHSLAKPDEFYKEIAGHTELKR VQKLLAAIHELMRLSDNNFVSDANKTTDSTQLNDREINTHAGL
Sequences:
>Translated_443_residues MQHNQIVAKHIAKLRSDVDAASSQDDLLDIITQVKHHPGPLDYRDKITHGIKWLLISASVLCIVFIFMRLWYEQVEPLAK LVIDYSCYWLPVALSTLLVSFCHERGWLPIPVPVSFALLVAAMALVTIYVPEWPEAYWTALRIFGYVISVGEIDNQQFAL WFILIITSSITWVWLDYRANWRKHLSDKIFLCDALFNNGLTQSKPAPEDKLDALVKQFAEFRRGSGTRDIEQMFEGQYQG EQHSFNYKLYHFQYTVKRTQTSSDGNGGYKTKTVHEHRDRYGMLLDFPFANGLCLDAEDEVKLKGSVYQEKYQTESNAFN DIYRVQACDKLTAARFLTPAMIETLLDLNRNFISPMVEIAPDGRLCIASTSKLIIEKRKHSLAKPDEFYKEIAGHTELKR VQKLLAAIHELMRLSDNNFVSDANKTTDSTQLNDREINTHAGL >Mature_443_residues MQHNQIVAKHIAKLRSDVDAASSQDDLLDIITQVKHHPGPLDYRDKITHGIKWLLISASVLCIVFIFMRLWYEQVEPLAK LVIDYSCYWLPVALSTLLVSFCHERGWLPIPVPVSFALLVAAMALVTIYVPEWPEAYWTALRIFGYVISVGEIDNQQFAL WFILIITSSITWVWLDYRANWRKHLSDKIFLCDALFNNGLTQSKPAPEDKLDALVKQFAEFRRGSGTRDIEQMFEGQYQG EQHSFNYKLYHFQYTVKRTQTSSDGNGGYKTKTVHEHRDRYGMLLDFPFANGLCLDAEDEVKLKGSVYQEKYQTESNAFN DIYRVQACDKLTAARFLTPAMIETLLDLNRNFISPMVEIAPDGRLCIASTSKLIIEKRKHSLAKPDEFYKEIAGHTELKR VQKLLAAIHELMRLSDNNFVSDANKTTDSTQLNDREINTHAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50879; Mature: 50879
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHNQIVAKHIAKLRSDVDAASSQDDLLDIITQVKHHPGPLDYRDKITHGIKWLLISASV CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LCIVFIFMRLWYEQVEPLAKLVIDYSCYWLPVALSTLLVSFCHERGWLPIPVPVSFALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AAMALVTIYVPEWPEAYWTALRIFGYVISVGEIDNQQFALWFILIITSSITWVWLDYRAN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECHHH WRKHLSDKIFLCDALFNNGLTQSKPAPEDKLDALVKQFAEFRRGSGTRDIEQMFEGQYQG HHHHCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC EQHSFNYKLYHFQYTVKRTQTSSDGNGGYKTKTVHEHRDRYGMLLDFPFANGLCLDAEDE CCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEECCCCC VKLKGSVYQEKYQTESNAFNDIYRVQACDKLTAARFLTPAMIETLLDLNRNFISPMVEIA EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHCC PDGRLCIASTSKLIIEKRKHSLAKPDEFYKEIAGHTELKRVQKLLAAIHELMRLSDNNFV CCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC SDANKTTDSTQLNDREINTHAGL CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQHNQIVAKHIAKLRSDVDAASSQDDLLDIITQVKHHPGPLDYRDKITHGIKWLLISASV CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LCIVFIFMRLWYEQVEPLAKLVIDYSCYWLPVALSTLLVSFCHERGWLPIPVPVSFALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AAMALVTIYVPEWPEAYWTALRIFGYVISVGEIDNQQFALWFILIITSSITWVWLDYRAN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECHHH WRKHLSDKIFLCDALFNNGLTQSKPAPEDKLDALVKQFAEFRRGSGTRDIEQMFEGQYQG HHHHCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC EQHSFNYKLYHFQYTVKRTQTSSDGNGGYKTKTVHEHRDRYGMLLDFPFANGLCLDAEDE CCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEECCCCC VKLKGSVYQEKYQTESNAFNDIYRVQACDKLTAARFLTPAMIETLLDLNRNFISPMVEIA EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHCC PDGRLCIASTSKLIIEKRKHSLAKPDEFYKEIAGHTELKRVQKLLAAIHELMRLSDNNFV CCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC SDANKTTDSTQLNDREINTHAGL CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA