| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962664
Identifier: 157962664
GI number: 157962664
Start: 3471752
End: 3472459
Strand: Reverse
Name: 157962664
Synonym: Spea_2845
Alternate gene names: NA
Gene position: 3472459-3471752 (Counterclockwise)
Preceding gene: 157962665
Following gene: 157962662
Centisome position: 67.11
GC content: 39.97
Gene sequence:
>708_bases ATGTTCGCGAAGCTAAAATCATGCAAATCAATATCCTCACTGGCAATAGTCTTTAGTCTTAATATTTCAGTCTCTTCAAA TGCCCACGCAGACGTTAAACAAATTTCAGACTTAACCCACTGTAAAAATGTGTCTAATGCATTTAAAAATGATCCTGCTG TGAAATGGTCTGATCACGTAAAGTCTTTGAATCACCCTACTCAGGCGAGAGAAGTTAAGGTTCTCTATCGTGAGGGAGCT GTGCTTGGTTGCCAAGCTATAATATGGAAAGGTGACAGCATAACTATGAGTCGTAGTCCTCTCTACACTCAGCTAGACTT TTCTACTGACAAGGTCAAAGTTAAAGTTTATCACGCTCCTATACCAGCACCGTCGTTGGTAGCTAAGCGTAAGGCTATTG CTGAGGCTAAACAAAAAGAAGCTAATCAACCTGTAAAGCCATTGTTTACCCAAGAAGAACTGGCGGCAATGAAAGAACAT GACGAACAGATGGAGCAAGACAAGGAGCGCTTTGGTCCAATTTGCAAATCTACAGCCCAGGACTTAGCATCAAAGCTCTT AGGTGACCTACATCATGTAATATTTACCTATAAACAAGGTGACTCTATAAATTGCAGTGCAGTGATTATCTCTGACGGGA ATATCCAAAATATAGGTATTAAGAAAGACCTAAATAGCAACAAGTACACTTATAGAAGTCAGCGATAA
Upstream 100 bases:
>100_bases CAGATTCGGGGCTTCATTCTGTTAAACTACGTTTTAATTGTCATCACAACCCTTACTCTTAGACTGTGGCTGAGTAATAA AAATAAGGTGTATTTAGGCT
Downstream 100 bases:
>100_bases CTATTATTGTGACTTCAAAAATGGCTTATAACAAAGCATTTAAGAGTGATTCGCAACGCTTGGCGCTTTCGCTTCGCTCA AGTATAGCCAAGCGCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MFAKLKSCKSISSLAIVFSLNISVSSNAHADVKQISDLTHCKNVSNAFKNDPAVKWSDHVKSLNHPTQAREVKVLYREGA VLGCQAIIWKGDSITMSRSPLYTQLDFSTDKVKVKVYHAPIPAPSLVAKRKAIAEAKQKEANQPVKPLFTQEELAAMKEH DEQMEQDKERFGPICKSTAQDLASKLLGDLHHVIFTYKQGDSINCSAVIISDGNIQNIGIKKDLNSNKYTYRSQR
Sequences:
>Translated_235_residues MFAKLKSCKSISSLAIVFSLNISVSSNAHADVKQISDLTHCKNVSNAFKNDPAVKWSDHVKSLNHPTQAREVKVLYREGA VLGCQAIIWKGDSITMSRSPLYTQLDFSTDKVKVKVYHAPIPAPSLVAKRKAIAEAKQKEANQPVKPLFTQEELAAMKEH DEQMEQDKERFGPICKSTAQDLASKLLGDLHHVIFTYKQGDSINCSAVIISDGNIQNIGIKKDLNSNKYTYRSQR >Mature_235_residues MFAKLKSCKSISSLAIVFSLNISVSSNAHADVKQISDLTHCKNVSNAFKNDPAVKWSDHVKSLNHPTQAREVKVLYREGA VLGCQAIIWKGDSITMSRSPLYTQLDFSTDKVKVKVYHAPIPAPSLVAKRKAIAEAKQKEANQPVKPLFTQEELAAMKEH DEQMEQDKERFGPICKSTAQDLASKLLGDLHHVIFTYKQGDSINCSAVIISDGNIQNIGIKKDLNSNKYTYRSQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26157; Mature: 26157
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAKLKSCKSISSLAIVFSLNISVSSNAHADVKQISDLTHCKNVSNAFKNDPAVKWSDHV CCCCHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH KSLNHPTQAREVKVLYREGAVLGCQAIIWKGDSITMSRSPLYTQLDFSTDKVKVKVYHAP HHCCCCCHHHHHHHHHHCCCEEEEEEEEEECCEEEECCCCCEEEECCCCCEEEEEEEECC IPAPSLVAKRKAIAEAKQKEANQPVKPLFTQEELAAMKEHDEQMEQDKERFGPICKSTAQ CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH DLASKLLGDLHHVIFTYKQGDSINCSAVIISDGNIQNIGIKKDLNSNKYTYRSQR HHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCEEECCEECCCCCCCCEECCCC >Mature Secondary Structure MFAKLKSCKSISSLAIVFSLNISVSSNAHADVKQISDLTHCKNVSNAFKNDPAVKWSDHV CCCCHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH KSLNHPTQAREVKVLYREGAVLGCQAIIWKGDSITMSRSPLYTQLDFSTDKVKVKVYHAP HHCCCCCHHHHHHHHHHCCCEEEEEEEEEECCEEEECCCCCEEEECCCCCEEEEEEEECC IPAPSLVAKRKAIAEAKQKEANQPVKPLFTQEELAAMKEHDEQMEQDKERFGPICKSTAQ CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH DLASKLLGDLHHVIFTYKQGDSINCSAVIISDGNIQNIGIKKDLNSNKYTYRSQR HHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCEEECCEECCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA