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The map label for this gene is ynfI [C]

Identifier: 157962636

GI number: 157962636

Start: 3436753

End: 3437478

Strand: Reverse

Name: ynfI [C]

Synonym: Spea_2816

Alternate gene names: 157962636

Gene position: 3437478-3436753 (Counterclockwise)

Preceding gene: 157962637

Following gene: 157962634

Centisome position: 66.43

GC content: 44.9

Gene sequence:

>726_bases
ATGTCTTCAAACACGCAGCCGTTAACACAATCAGCGCTTACTCAATCATCTATAAGCAATATTGACTTTGTCGAGTACCA
AGGGCTAGCGCGAATACTGCATCATTGCCTTATTCGTTATCCAGAGGCCGATTTTATCGATGGGCTAAAAGAGTGTGATG
TGGCTGGCAGCTGGCCTGAATTTTCTCAGCGTCAGCAAAACAGCACTGGTCGCAAATTGCTGGGAGATTTTTTACAGCAA
TGGTCTTCTGATATTGATGCTGCGGATTCGGAGAAGGCATTAATCACCTTAAAGCTGGATTACGGCCAACTTTTCTTTGG
ACCAGGCGAACCGACAGCTGTGCCGCAAGGCTCAGTTTACCTGTGTGAAGAGCAGTTAATTAACGATAGAACTACCGTTG
AGTTGATGGATTACTATCGCGCTCATGGGGTTGAGTTACAACTCGATTACAAGCAGCCCATTGACCATATAGGTTTGTTT
TTCGCTGTACTCGACCAAACATTTGGTCGCTTGCAGAGCGAAATTGATAACCAAGCTTTGATCCGCTTTATTCAAGTGCT
ATTGCAGCAACACCTATTGCCGTGGGCATTGCGCTGCTGTGAGTTAGCCAATGAGCATGCCAAGACAGATTTTTATCGTG
GAATAGCGCTGTTAACTACAGACTTCTTGTTGCAGTTACAGCAAGACTTTCAAGTATTAGCACTGGATAAGCGACTGTTT
CGCTAA

Upstream 100 bases:

>100_bases
CCTAAACCCAACTGAAGTTTAATTTCAGTTGTTTGGATAACAAAAGTCTTTAAATAATACATCAGCGGGCTTAATGGCCC
GCTTAGCTTTAAGGTCAACT

Downstream 100 bases:

>100_bases
TTGCGCCAAATAAAGCACGACAAAAAGCCCGCAAATGAAAGTTTGCGGGCTTTTTATTTATAAAATCTAGTAAAAGCTAA
CCATGACTACCCATATTGCG

Product: cytoplasmic chaperone TorD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSSNTQPLTQSALTQSSISNIDFVEYQGLARILHHCLIRYPEADFIDGLKECDVAGSWPEFSQRQQNSTGRKLLGDFLQQ
WSSDIDAADSEKALITLKLDYGQLFFGPGEPTAVPQGSVYLCEEQLINDRTTVELMDYYRAHGVELQLDYKQPIDHIGLF
FAVLDQTFGRLQSEIDNQALIRFIQVLLQQHLLPWALRCCELANEHAKTDFYRGIALLTTDFLLQLQQDFQVLALDKRLF
R

Sequences:

>Translated_241_residues
MSSNTQPLTQSALTQSSISNIDFVEYQGLARILHHCLIRYPEADFIDGLKECDVAGSWPEFSQRQQNSTGRKLLGDFLQQ
WSSDIDAADSEKALITLKLDYGQLFFGPGEPTAVPQGSVYLCEEQLINDRTTVELMDYYRAHGVELQLDYKQPIDHIGLF
FAVLDQTFGRLQSEIDNQALIRFIQVLLQQHLLPWALRCCELANEHAKTDFYRGIALLTTDFLLQLQQDFQVLALDKRLF
R
>Mature_240_residues
SSNTQPLTQSALTQSSISNIDFVEYQGLARILHHCLIRYPEADFIDGLKECDVAGSWPEFSQRQQNSTGRKLLGDFLQQW
SSDIDAADSEKALITLKLDYGQLFFGPGEPTAVPQGSVYLCEEQLINDRTTVELMDYYRAHGVELQLDYKQPIDHIGLFF
AVLDQTFGRLQSEIDNQALIRFIQVLLQQHLLPWALRCCELANEHAKTDFYRGIALLTTDFLLQLQQDFQVLALDKRLFR

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. DmsD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 27579; Mature: 27447

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNTQPLTQSALTQSSISNIDFVEYQGLARILHHCLIRYPEADFIDGLKECDVAGSWPE
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCCCCHH
FSQRQQNSTGRKLLGDFLQQWSSDIDAADSEKALITLKLDYGQLFFGPGEPTAVPQGSVY
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCEE
LCEEQLINDRTTVELMDYYRAHGVELQLDYKQPIDHIGLFFAVLDQTFGRLQSEIDNQAL
EHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
IRFIQVLLQQHLLPWALRCCELANEHAKTDFYRGIALLTTDFLLQLQQDFQVLALDKRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure 
SSNTQPLTQSALTQSSISNIDFVEYQGLARILHHCLIRYPEADFIDGLKECDVAGSWPE
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCCCCHH
FSQRQQNSTGRKLLGDFLQQWSSDIDAADSEKALITLKLDYGQLFFGPGEPTAVPQGSVY
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCEE
LCEEQLINDRTTVELMDYYRAHGVELQLDYKQPIDHIGLFFAVLDQTFGRLQSEIDNQAL
EHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
IRFIQVLLQQHLLPWALRCCELANEHAKTDFYRGIALLTTDFLLQLQQDFQVLALDKRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]