| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962626
Identifier: 157962626
GI number: 157962626
Start: 3425714
End: 3426127
Strand: Reverse
Name: 157962626
Synonym: Spea_2806
Alternate gene names: NA
Gene position: 3426127-3425714 (Counterclockwise)
Preceding gene: 157962627
Following gene: 157962616
Centisome position: 66.21
GC content: 45.17
Gene sequence:
>414_bases ATGAAATTTGTAAAACTGGCTGCCATCGCTCTGATGTGCTCAAGCCTTAGCGCTTGTATAACCTTTCCCACAGATGAATC CAACACTGTTAAAGTCCTCTGGGATGATACCGATTCACTGGTTGGCTGCGAACATAAAGGCACTGTCATTGGCTCACAAG GCCACTTTTATGATTATTGGCTGCATGCCGATAAGGATATGGTGTGGGGCACACTTAATGAAATGCGTATTAAGGCTGCC AAGCTTGGGGCTGACACCATCTACTTGTACAAGCCGTTGGGGTTTACAGGTTCGGTGACCATGATAGCCAATGCATATGA TTGTGAGACTGCGCCTCTTGAAACAAATAGCTCAAGTCAGTTGAAAATCAACGAGGCTGCAGATGTTATTATGTCTGCTA ACGAAGCTCAGTAA
Upstream 100 bases:
>100_bases TTGTGGAGTTGACGGCGGCATTACAAATATTTTATAGCAGGATTCACAAAACGGCTTAAAGACTATATTATCGCCTCCCT TTTAATTTTGACTGTAAACC
Downstream 100 bases:
>100_bases TCGCTATATTAAGTATGAACTTGTCGGTTGTGCAAGTTCATACCGGGCAATTTAACTCTGTTATTCGCAGAGTGGGAAAA GATACCTTTCCGCTTGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Ubiquinone Biosynthesis Protein AarF; Lipoprotein
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKFVKLAAIALMCSSLSACITFPTDESNTVKVLWDDTDSLVGCEHKGTVIGSQGHFYDYWLHADKDMVWGTLNEMRIKAA KLGADTIYLYKPLGFTGSVTMIANAYDCETAPLETNSSSQLKINEAADVIMSANEAQ
Sequences:
>Translated_137_residues MKFVKLAAIALMCSSLSACITFPTDESNTVKVLWDDTDSLVGCEHKGTVIGSQGHFYDYWLHADKDMVWGTLNEMRIKAA KLGADTIYLYKPLGFTGSVTMIANAYDCETAPLETNSSSQLKINEAADVIMSANEAQ >Mature_137_residues MKFVKLAAIALMCSSLSACITFPTDESNTVKVLWDDTDSLVGCEHKGTVIGSQGHFYDYWLHADKDMVWGTLNEMRIKAA KLGADTIYLYKPLGFTGSVTMIANAYDCETAPLETNSSSQLKINEAADVIMSANEAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14966; Mature: 14966
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVKLAAIALMCSSLSACITFPTDESNTVKVLWDDTDSLVGCEHKGTVIGSQGHFYDYW CCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCEECCCCCCCEEECCCCEEEEE LHADKDMVWGTLNEMRIKAAKLGADTIYLYKPLGFTGSVTMIANAYDCETAPLETNSSSQ EECCCCCEEECHHHHEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCE LKINEAADVIMSANEAQ EEECCHHEEEEECCCCC >Mature Secondary Structure MKFVKLAAIALMCSSLSACITFPTDESNTVKVLWDDTDSLVGCEHKGTVIGSQGHFYDYW CCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCEECCCCCCCEEECCCCEEEEE LHADKDMVWGTLNEMRIKAAKLGADTIYLYKPLGFTGSVTMIANAYDCETAPLETNSSSQ EECCCCCEEECHHHHEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCE LKINEAADVIMSANEAQ EEECCHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA