| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yqjI [H]
Identifier: 157962615
GI number: 157962615
Start: 3411130
End: 3412665
Strand: Reverse
Name: yqjI [H]
Synonym: Spea_2794
Alternate gene names: 157962615
Gene position: 3412665-3411130 (Counterclockwise)
Preceding gene: 157962616
Following gene: 157962613
Centisome position: 65.95
GC content: 47.98
Gene sequence:
>1536_bases ATGAATAACCAATCTAATCTTTTCGATATAGGTGTTATTGGCTTAGGCGTAATGGGCAAGAATCTAGCGCTTAATATCGC TGATAACCAATATCGCGTCGCTGCATTTGACCTTGATGAAATTAAAGTGCAAGACACTGTCAATCAAGAGAAACTTGAAC GTCAACAATACCTAAAACAGATAACAGAGCCACGCATCCTCGGCTGTAACAATCTTTCTGAAATGTTATCTAAATTAGAA AAACCTCGAGTGCTGTTGCTATCGGTTCCAGCGGGTGCGCCTGTAGGTGGTGCATGTCAGTCCCTGATTGATGCCGGAAT TGAGAGCGATGATATCGTTATCGATACAGGTAATAGTCTGTGGACAGATACTGTCGAGCGAGAACAGCGCTACGCCGATG ATTTCTTATTTTTTAGCTGCGCCGTTTCTGGCGGTGAAGTCGGCGCCCGTTTTGGCCCCTCATTGATGCCAAGCGGTAGC TTAAAGGCCTGGAATAGAATTGAACCGATTTGGCAAGCCATTGCCGCTAAGGTCGATGCAAAAACAGGTTTACCTATCGA ACGGTTTGAGCCGGGAAACCCTGTTAAAGAGGGCGAACCTTGCACTACTTATATCGGTCCTGCTGGGTCAGGTCATTATG TAAAAATGGTACATAACGGCATCGAATACGCCGATATGCAGCTGATCTGTGAGGCTTACCAGCTACTAAATCAAGGCTTA GGGTTAACCCCGAGTGAAGTGGCTGATGTGTTTGAGCGCTGGGATCAAGGTAGCTTAAATAGCTACTTGATGCAGATCAG CGCAAAGGTGCTTAAGCAAGCAGACCCATTAACGGGCGCGCCGCTGGTGGAGATGATCTTAGATAAGGCGGGGCAAAAAG GCACAGGCCTTTGGACTGCGGTAAGCAGCCTGCAAATAGGCTGCCCGGCGCCAACCATTGCCGAAGCCGTATATGCTCGT GCGCTGAGCACTCAAAAAACTCAGCGTCAGCAGTTAAGTCAGCAGTTATCGGGGCCGAGTAAAGCCCTAGGCAATATTGA TAAACAAGCGTTTATCGAACAGCTGGAAAGTGCACTCTATTGCGCTAAAGTATCCTGTTACGCTCAAGGTTTTCAGCTGA TGGCTATGCAAGCTAAAGAGCAGGGCTGGCAGTTAGATTTTGCCGAGATAGCTAAGATCTGGCGAGCAGGCTGTATTATT CGCGCCACATTCTTACAGTCGATTACTGAGGCTTATCAGCAAGATAGCTCGCTTGAGAACTTGTTGCTGGCGGAAGCTTT CTCAAAGGCCTTGTCTGTAAAGCAGCAAGATTGGCGAGTGGCGGTATCGACTGCGGTACTCAGTGGTATTCCGGCTCCTT GTATCAGCTCGGCGTTGGCTTATTACGATAGCTATCGCTGCGAAACTTTGCCCGCGAGCTTACTTCAGGGGCAGCGTGAC TTCTTTGGTGCCCATACTTTTGAACGTATCGATAAGCCTGCAGGTGAGAAGTTCCACTTAAACTGGAGTGGCGATCTCAG CTTAATTAAGGTGTAA
Upstream 100 bases:
>100_bases AATCCATAACAAATAACCCTATCAATCAAGCAAGCGCAATGACGTAAGCTGAACAAAAAATAGATAGGGAACTCTCTGTG ACCTGCGGAATATAATTTAA
Downstream 100 bases:
>100_bases CCATATTTCAGGACAAGACATAGATAATAAAAAAGCCTATCAAATTGATAGGCTTTTTTGTCATCGAGTCTCGTACAGAG TTTAGTTAATGCTAGAAGTT
Product: 6-phosphogluconate dehydrogenase
Products: NA
Alternate protein names: GNTZII [H]
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MNNQSNLFDIGVIGLGVMGKNLALNIADNQYRVAAFDLDEIKVQDTVNQEKLERQQYLKQITEPRILGCNNLSEMLSKLE KPRVLLLSVPAGAPVGGACQSLIDAGIESDDIVIDTGNSLWTDTVEREQRYADDFLFFSCAVSGGEVGARFGPSLMPSGS LKAWNRIEPIWQAIAAKVDAKTGLPIERFEPGNPVKEGEPCTTYIGPAGSGHYVKMVHNGIEYADMQLICEAYQLLNQGL GLTPSEVADVFERWDQGSLNSYLMQISAKVLKQADPLTGAPLVEMILDKAGQKGTGLWTAVSSLQIGCPAPTIAEAVYAR ALSTQKTQRQQLSQQLSGPSKALGNIDKQAFIEQLESALYCAKVSCYAQGFQLMAMQAKEQGWQLDFAEIAKIWRAGCII RATFLQSITEAYQQDSSLENLLLAEAFSKALSVKQQDWRVAVSTAVLSGIPAPCISSALAYYDSYRCETLPASLLQGQRD FFGAHTFERIDKPAGEKFHLNWSGDLSLIKV
Sequences:
>Translated_511_residues MNNQSNLFDIGVIGLGVMGKNLALNIADNQYRVAAFDLDEIKVQDTVNQEKLERQQYLKQITEPRILGCNNLSEMLSKLE KPRVLLLSVPAGAPVGGACQSLIDAGIESDDIVIDTGNSLWTDTVEREQRYADDFLFFSCAVSGGEVGARFGPSLMPSGS LKAWNRIEPIWQAIAAKVDAKTGLPIERFEPGNPVKEGEPCTTYIGPAGSGHYVKMVHNGIEYADMQLICEAYQLLNQGL GLTPSEVADVFERWDQGSLNSYLMQISAKVLKQADPLTGAPLVEMILDKAGQKGTGLWTAVSSLQIGCPAPTIAEAVYAR ALSTQKTQRQQLSQQLSGPSKALGNIDKQAFIEQLESALYCAKVSCYAQGFQLMAMQAKEQGWQLDFAEIAKIWRAGCII RATFLQSITEAYQQDSSLENLLLAEAFSKALSVKQQDWRVAVSTAVLSGIPAPCISSALAYYDSYRCETLPASLLQGQRD FFGAHTFERIDKPAGEKFHLNWSGDLSLIKV >Mature_511_residues MNNQSNLFDIGVIGLGVMGKNLALNIADNQYRVAAFDLDEIKVQDTVNQEKLERQQYLKQITEPRILGCNNLSEMLSKLE KPRVLLLSVPAGAPVGGACQSLIDAGIESDDIVIDTGNSLWTDTVEREQRYADDFLFFSCAVSGGEVGARFGPSLMPSGS LKAWNRIEPIWQAIAAKVDAKTGLPIERFEPGNPVKEGEPCTTYIGPAGSGHYVKMVHNGIEYADMQLICEAYQLLNQGL GLTPSEVADVFERWDQGSLNSYLMQISAKVLKQADPLTGAPLVEMILDKAGQKGTGLWTAVSSLQIGCPAPTIAEAVYAR ALSTQKTQRQQLSQQLSGPSKALGNIDKQAFIEQLESALYCAKVSCYAQGFQLMAMQAKEQGWQLDFAEIAKIWRAGCII RATFLQSITEAYQQDSSLENLLLAEAFSKALSVKQQDWRVAVSTAVLSGIPAPCISSALAYYDSYRCETLPASLLQGQRD FFGAHTFERIDKPAGEKFHLNWSGDLSLIKV
Specific function: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH [H]
COG id: COG0362
COG function: function code G; 6-phosphogluconate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 6-phosphogluconate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI40068518, Length=497, Percent_Identity=46.6800804828974, Blast_Score=430, Evalue=1e-120, Organism=Escherichia coli, GI1788341, Length=494, Percent_Identity=45.1417004048583, Blast_Score=409, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17542558, Length=502, Percent_Identity=46.4143426294821, Blast_Score=438, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6321695, Length=504, Percent_Identity=45.4365079365079, Blast_Score=445, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6321977, Length=504, Percent_Identity=44.8412698412698, Blast_Score=424, Evalue=1e-119, Organism=Drosophila melanogaster, GI24639279, Length=497, Percent_Identity=44.466800804829, Blast_Score=402, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR006114 - InterPro: IPR006113 - InterPro: IPR006115 - InterPro: IPR006184 - InterPro: IPR013328 - InterPro: IPR012284 - InterPro: IPR016040 - InterPro: IPR006183 [H]
Pfam domain/function: PF00393 6PGD; PF03446 NAD_binding_2 [H]
EC number: =1.1.1.44 [H]
Molecular weight: Translated: 55838; Mature: 55838
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00461 6PGD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQSNLFDIGVIGLGVMGKNLALNIADNQYRVAAFDLDEIKVQDTVNQEKLERQQYLKQ CCCCCCEEEEHHHHHCCCCCCEEEEECCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHHH ITEPRILGCNNLSEMLSKLEKPRVLLLSVPAGAPVGGACQSLIDAGIESDDIVIDTGNSL HCCCCEECCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEECCCCH WTDTVEREQRYADDFLFFSCAVSGGEVGARFGPSLMPSGSLKAWNRIEPIWQAIAAKVDA HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC KTGLPIERFEPGNPVKEGEPCTTYIGPAGSGHYVKMVHNGIEYADMQLICEAYQLLNQGL CCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHCCC GLTPSEVADVFERWDQGSLNSYLMQISAKVLKQADPLTGAPLVEMILDKAGQKGTGLWTA CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHH VSSLQIGCPAPTIAEAVYARALSTQKTQRQQLSQQLSGPSKALGNIDKQAFIEQLESALY HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHH CAKVSCYAQGFQLMAMQAKEQGWQLDFAEIAKIWRAGCIIRATFLQSITEAYQQDSSLEN HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LLLAEAFSKALSVKQQDWRVAVSTAVLSGIPAPCISSALAYYDSYRCETLPASLLQGQRD HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCHHHHCCCHH FFGAHTFERIDKPAGEKFHLNWSGDLSLIKV HHHHHHHHHHCCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure MNNQSNLFDIGVIGLGVMGKNLALNIADNQYRVAAFDLDEIKVQDTVNQEKLERQQYLKQ CCCCCCEEEEHHHHHCCCCCCEEEEECCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHHH ITEPRILGCNNLSEMLSKLEKPRVLLLSVPAGAPVGGACQSLIDAGIESDDIVIDTGNSL HCCCCEECCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEECCCCH WTDTVEREQRYADDFLFFSCAVSGGEVGARFGPSLMPSGSLKAWNRIEPIWQAIAAKVDA HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC KTGLPIERFEPGNPVKEGEPCTTYIGPAGSGHYVKMVHNGIEYADMQLICEAYQLLNQGL CCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHCCC GLTPSEVADVFERWDQGSLNSYLMQISAKVLKQADPLTGAPLVEMILDKAGQKGTGLWTA CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHH VSSLQIGCPAPTIAEAVYARALSTQKTQRQQLSQQLSGPSKALGNIDKQAFIEQLESALY HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHH CAKVSCYAQGFQLMAMQAKEQGWQLDFAEIAKIWRAGCIIRATFLQSITEAYQQDSSLEN HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LLLAEAFSKALSVKQQDWRVAVSTAVLSGIPAPCISSALAYYDSYRCETLPASLLQGQRD HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCHHHHCCCHH FFGAHTFERIDKPAGEKFHLNWSGDLSLIKV HHHHHHHHHHCCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10568751; 9298659 [H]