| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yqgI [H]
Identifier: 157962565
GI number: 157962565
Start: 3352594
End: 3354246
Strand: Reverse
Name: yqgI [H]
Synonym: Spea_2744
Alternate gene names: 157962565
Gene position: 3354246-3352594 (Counterclockwise)
Preceding gene: 157962566
Following gene: 157962564
Centisome position: 64.82
GC content: 47.85
Gene sequence:
>1653_bases ATGGGTAAGTGGTTTAAGTCTGGTTCTCCTTGGATTTGGATGACCAGTGGCGCGGTAAGCGTGTGTTTGATCGCGGTGCT TGGATTGTTGCTACTAATAGCCTGGCGTGGTCTGAGTTACTTCTGGCCTGCAGATATTTATCAGTGGGAGATGAAGAACC AGCAAGGCGAGCGTTACACACTTATTGGTGAAATCTACGATAAAGAAGAAGTCCCAACAGAGCGTTTACTTGCCGCTGGA CATAAGTTCGACACAGAAGTCGGTGAGAACATCACACGTTATTTGATCAAGACGGGTAACCGTGAGTTTGTCGGTCTAGA TTTCCGCTGGATTTTGGCAACAGATATCATATCTCGCTCACAGCCTGAAAACATTGCGGTAATCGAGCGCAGTAAAAATG GTGATTTTTATGGTTTCCCTGTGGCGATTATCGAAGATGGCAAGCGTTTAGCCTCACAAGATATCGAGGCTGATTTTCAG TCCCATATAAATCGCGCCGTTGAGCTTAACGATGAAGCGCTCGATATACAAAAAGGAGTGATTGGCTCGATTAACTATGA GCTTGAGAATCTACGCCTAAAGTCACGTCGTTATGAGCTGGATAACGCGTTAACTGAGACTCGCAAAGCAGAGATTGAAG CGGCCAGCGCCAAGCTCAACGCCGAATACCTTGTTGTAGAGAAAGAGTTCTTCGCCCTTAAGACACAAGCGGGCAGAGAT TCAGTCGTTATTCGCGATATGCGCGGCGAAGAAGTGACACTTAAGCTAGATACCATCTTAGATGTGACCTACGCCAACCG ATTGGGCCTTATGGGGAGAATCGGCCACTGGTTTATTGGTGTGGGCAAATTTGTCAGTGATGACCCGCGAGAAGCAAACA CCGAGGGTGGTGTCTTCCCTGCGATTTTCGGCACCGTATTTATGGTGATGCTGATGGCGGTTATCGTGACGCCATTTGGT GTTATCGCCGCTATCTACTTACACGAATACGCTAAAAAAGGCCCTGTGACTAAGATGATCCGCATCGCGGTAATTAACTT AGCTGGTGTACCATCAATTGTGTACGGCGTATTTGGCTTAGGTTTCTTTGTCTATATGTTTGGTGGCACGCTAGATCAGT TGTTCTACCCTGAAGCGCTACCCGCTCCGACATTTGGCTCACCTGGGGTGATCTGGTCAGCACTGACCCTGGCTATTTTA ACTTTGCCGGTGGTGATTGTATCGACGGAAGAAGGTTTGAGCCGTATTCCAAGCTCAGTTCGCCAAGGTAGCTTGGCACT CGGCGCGACTAAGGCTGAAACGCTGTGGCGTATTATTATCCCTATGGCGAGCCCTGCTATTATGACGGGTTTGATTTTGG CTGTTGCCCGTGCAGCGGGTGAGGTTGCCCCCTTAATGTTGGTAGGTGTGGTTAAGCTTGCGCCGACACTGCCAATCGAC ATGAATTTCCCATTTGTGCATCTAGAACGTAAGTTTATGCACTTAGGTTTCCACATCTATGATGTTGGGTTCCAAAGCCC TAACGTAGAAGCAGCGCGTCCATTGGTATACGCTACTTCATTCCTTTTGGTCTCGGTAATTGTGGCACTTAATTTAACCG CCATCGGTGTACGAAACCACTTACGCGAAAAATATCGTTCGCTTGAGCACTAA
Upstream 100 bases:
>100_bases ACAGCTCACTTTAACCCCATTGTTATGGATGATAAGAAAATGATGTTTAATACAATTTCACTAAATGCTATTTCGGCAGT AGCCTTAAGAGGTTTAGCTA
Downstream 100 bases:
>100_bases TTGACGATTATCCTAAGCAGTAGGAAAGAACATGATTTCAATAGATCAATCGGTAATGAAGACAGATATGCTAGACCTAG AAAACTTAACACCAGAACAA
Product: phosphate ABC transporter inner membrane subunit PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MGKWFKSGSPWIWMTSGAVSVCLIAVLGLLLLIAWRGLSYFWPADIYQWEMKNQQGERYTLIGEIYDKEEVPTERLLAAG HKFDTEVGENITRYLIKTGNREFVGLDFRWILATDIISRSQPENIAVIERSKNGDFYGFPVAIIEDGKRLASQDIEADFQ SHINRAVELNDEALDIQKGVIGSINYELENLRLKSRRYELDNALTETRKAEIEAASAKLNAEYLVVEKEFFALKTQAGRD SVVIRDMRGEEVTLKLDTILDVTYANRLGLMGRIGHWFIGVGKFVSDDPREANTEGGVFPAIFGTVFMVMLMAVIVTPFG VIAAIYLHEYAKKGPVTKMIRIAVINLAGVPSIVYGVFGLGFFVYMFGGTLDQLFYPEALPAPTFGSPGVIWSALTLAIL TLPVVIVSTEEGLSRIPSSVRQGSLALGATKAETLWRIIIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPID MNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAIGVRNHLREKYRSLEH
Sequences:
>Translated_550_residues MGKWFKSGSPWIWMTSGAVSVCLIAVLGLLLLIAWRGLSYFWPADIYQWEMKNQQGERYTLIGEIYDKEEVPTERLLAAG HKFDTEVGENITRYLIKTGNREFVGLDFRWILATDIISRSQPENIAVIERSKNGDFYGFPVAIIEDGKRLASQDIEADFQ SHINRAVELNDEALDIQKGVIGSINYELENLRLKSRRYELDNALTETRKAEIEAASAKLNAEYLVVEKEFFALKTQAGRD SVVIRDMRGEEVTLKLDTILDVTYANRLGLMGRIGHWFIGVGKFVSDDPREANTEGGVFPAIFGTVFMVMLMAVIVTPFG VIAAIYLHEYAKKGPVTKMIRIAVINLAGVPSIVYGVFGLGFFVYMFGGTLDQLFYPEALPAPTFGSPGVIWSALTLAIL TLPVVIVSTEEGLSRIPSSVRQGSLALGATKAETLWRIIIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPID MNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAIGVRNHLREKYRSLEH >Mature_549_residues GKWFKSGSPWIWMTSGAVSVCLIAVLGLLLLIAWRGLSYFWPADIYQWEMKNQQGERYTLIGEIYDKEEVPTERLLAAGH KFDTEVGENITRYLIKTGNREFVGLDFRWILATDIISRSQPENIAVIERSKNGDFYGFPVAIIEDGKRLASQDIEADFQS HINRAVELNDEALDIQKGVIGSINYELENLRLKSRRYELDNALTETRKAEIEAASAKLNAEYLVVEKEFFALKTQAGRDS VVIRDMRGEEVTLKLDTILDVTYANRLGLMGRIGHWFIGVGKFVSDDPREANTEGGVFPAIFGTVFMVMLMAVIVTPFGV IAAIYLHEYAKKGPVTKMIRIAVINLAGVPSIVYGVFGLGFFVYMFGGTLDQLFYPEALPAPTFGSPGVIWSALTLAILT LPVVIVSTEEGLSRIPSSVRQGSLALGATKAETLWRIIIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPIDM NFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAIGVRNHLREKYRSLEH
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=179, Percent_Identity=36.3128491620112, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790164, Length=187, Percent_Identity=31.0160427807487, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 61026; Mature: 60895
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKWFKSGSPWIWMTSGAVSVCLIAVLGLLLLIAWRGLSYFWPADIYQWEMKNQQGERYT CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEHHCCCCCCEEE LIGEIYDKEEVPTERLLAAGHKFDTEVGENITRYLIKTGNREFVGLDFRWILATDIISRS EEEEHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCC QPENIAVIERSKNGDFYGFPVAIIEDGKRLASQDIEADFQSHINRAVELNDEALDIQKGV CCCCEEEEEECCCCCEEECEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCC IGSINYELENLRLKSRRYELDNALTETRKAEIEAASAKLNAEYLVVEKEFFALKTQAGRD CCEECEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHEECCCCCC SVVIRDMRGEEVTLKLDTILDVTYANRLGLMGRIGHWFIGVGKFVSDDPREANTEGGVFP CEEEEECCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH AIFGTVFMVMLMAVIVTPFGVIAAIYLHEYAKKGPVTKMIRIAVINLAGVPSIVYGVFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH GFFVYMFGGTLDQLFYPEALPAPTFGSPGVIWSALTLAILTLPVVIVSTEEGLSRIPSSV HHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECHHHHHHCHHHH RQGSLALGATKAETLWRIIIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPID HCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC MNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAIGVRNH CCCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREKYRSLEH HHHHHHHCCC >Mature Secondary Structure GKWFKSGSPWIWMTSGAVSVCLIAVLGLLLLIAWRGLSYFWPADIYQWEMKNQQGERYT CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEHHCCCCCCEEE LIGEIYDKEEVPTERLLAAGHKFDTEVGENITRYLIKTGNREFVGLDFRWILATDIISRS EEEEHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCC QPENIAVIERSKNGDFYGFPVAIIEDGKRLASQDIEADFQSHINRAVELNDEALDIQKGV CCCCEEEEEECCCCCEEECEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCC IGSINYELENLRLKSRRYELDNALTETRKAEIEAASAKLNAEYLVVEKEFFALKTQAGRD CCEECEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHEECCCCCC SVVIRDMRGEEVTLKLDTILDVTYANRLGLMGRIGHWFIGVGKFVSDDPREANTEGGVFP CEEEEECCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH AIFGTVFMVMLMAVIVTPFGVIAAIYLHEYAKKGPVTKMIRIAVINLAGVPSIVYGVFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH GFFVYMFGGTLDQLFYPEALPAPTFGSPGVIWSALTLAILTLPVVIVSTEEGLSRIPSSV HHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECHHHHHHCHHHH RQGSLALGATKAETLWRIIIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPID HCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC MNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAIGVRNH CCCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREKYRSLEH HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]