| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is pgcA [H]
Identifier: 157962548
GI number: 157962548
Start: 3332821
End: 3334554
Strand: Reverse
Name: pgcA [H]
Synonym: Spea_2727
Alternate gene names: 157962548
Gene position: 3334554-3332821 (Counterclockwise)
Preceding gene: 157962550
Following gene: 157962541
Centisome position: 64.44
GC content: 49.6
Gene sequence:
>1734_bases ATGGATACCCAATTAGCATTGAGAGTCAAACATTGGATGGCTAGCGACCCAGACCCTTTAATGCGACAGCAGCTACAAAC TCTGCTGAATTCCGGTGATAGCGCTGAACTTGAAGGGCGTTTTGCGGGGCGACTCGCATTTGGTACCGCAGGGTTACGTG GTGTGGTTGGCGCTGGTCCGACTCGAATGAATCGATTAGTTGTGCAGCAAACATCTGCAGGCTTAGGTGCGTATCTAAAA GCACAAATTAGCGATGTGGCTACCCGCGGCGTGGTGATTGGTTATGATGGTCGCCATGACTCGAAACAGTTTGCCCATGA CGCAGCCAGTGTATTAACGGCAATGGGAATAAAGGTTTACCTTACAGCAAATGTTGCTGCAACGCCGCTGGTGGCTTTTG GTGTGCTGCATTTAGGTACCGCAGCAGGGATTGTTGTCACCGCAAGTCACAACCCGCCACAATATAACGGCTATAAAGTC TATTGGGGCAATGGCGCGCAGATCATTCCTCCCCACGACAGTGGTATTGCCGCCTGTATCGATAAAGCTGCTACCCAAGT GATCCCATTACTGGAGATGCCACAAGCAAAAGCCTCGGGTCAGTTAGTGATGCTGGAAGAGGATTTTTATGATGCATATC GTCAAGGTGTGAAGCTGGCTCCAGTGCTGCAGAATCATACTCAACCAGAAGCTGTGAGCTTAGCCTATACCGCCATGCAT GGTGTGGGAAATCAGATGGCACTTGATGTATTAAAGGATGCGGGGTTTACAAAAGTGTATTCGGTTGCCGAGCAGGCGCA GCCTGATGGTGACTTTCCAACGGTCAATTTCCCCAACCCGGAAGAGAAGGGCGCTATGGATATGGTCATGGCTGAGGCGA AAAAACATGGCGCCATGCTGGCTTGTGCAAATGATCCCGATGCCGACCGTTTTGCCGTTGCCGTTCGTACTGACAGCGGA GATTATCAGATGCTCACCGGCGATCAGGTCGGGGTGTTATTTGGCCACTATCTGCTGACTCATGCCAGTGAAAATCAGCG GTTAACCTGCACCACCATAGTGTCATCAAGCTTATTATCTAAGGTTGCTCAAAGCTTAAATGCGACATGCAGAACCACGC TGACCGGCTTTAAATGGTTAACCAACGTGGGTATGAGTGAAGAGACTGATAGTAATCGTTTCCTGTTCGCCTATGAGGAG GCGTTGGGTTACACCGTTGGCTCTATGGTGTGGGATAAAGATGGCTTATCGGCCTTGGTGGCGTTTGCTCAGTTAACCGC AGAACTTGCCAGTCAAGGTCAAACCATTTGGGATCGTCTCGAAGCTATCTATCGTGAACATGGTTTTCACATCAATGCTC AAGTGAGTATTGCATTAAAGCCAACAACACCGAATATCGGTGCTTATCTGCGTGCGAATCCACCGACGGAAATCGCAGGG CATAAAGTGCTATCGACCGATGATATCAGTTTAGGTAAACGCTTCTTTTTTGAGGGCAGTGCCGATGGCACACAAGAGGA TATCGCGCTCCCTGCCAGTGACGTGCTGATCTATCGTCTTAAAAACGGTGCTCGAGTGATAGTAAGACCATCGGGTACGG AACCGAAAATTAAGTGTTACTACGAAGTGGTCGAATCGATGAGCAAGGATGACAGCTTAGCAAGTGCACAACAAAGAGCT GAGGTTGAAATGGCGCGCTTTATCGAGGCGCATCAGGCGGCGCTACCTAAATAG
Upstream 100 bases:
>100_bases TAATTTAAGTGTTTAGTCAGGTTCAATCTTAGTAATGTGCTGCGATCGGTTGTTTATTCTTTAGCGGGCATTACCTCATC GACAGTAAATGGAGCGAGTT
Downstream 100 bases:
>100_bases TATCTATTTGGTATGAATATCTCTTAGATGATTTTTGGGACTAGCTAAACTGAGATCATTCGAGCATATAACTGAGGGAA AACTGTAAATTGGACCTTTA
Product: phosphoglucomutase/phosphomannomutase subunit alpha/beta
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MDTQLALRVKHWMASDPDPLMRQQLQTLLNSGDSAELEGRFAGRLAFGTAGLRGVVGAGPTRMNRLVVQQTSAGLGAYLK AQISDVATRGVVIGYDGRHDSKQFAHDAASVLTAMGIKVYLTANVAATPLVAFGVLHLGTAAGIVVTASHNPPQYNGYKV YWGNGAQIIPPHDSGIAACIDKAATQVIPLLEMPQAKASGQLVMLEEDFYDAYRQGVKLAPVLQNHTQPEAVSLAYTAMH GVGNQMALDVLKDAGFTKVYSVAEQAQPDGDFPTVNFPNPEEKGAMDMVMAEAKKHGAMLACANDPDADRFAVAVRTDSG DYQMLTGDQVGVLFGHYLLTHASENQRLTCTTIVSSSLLSKVAQSLNATCRTTLTGFKWLTNVGMSEETDSNRFLFAYEE ALGYTVGSMVWDKDGLSALVAFAQLTAELASQGQTIWDRLEAIYREHGFHINAQVSIALKPTTPNIGAYLRANPPTEIAG HKVLSTDDISLGKRFFFEGSADGTQEDIALPASDVLIYRLKNGARVIVRPSGTEPKIKCYYEVVESMSKDDSLASAQQRA EVEMARFIEAHQAALPK
Sequences:
>Translated_577_residues MDTQLALRVKHWMASDPDPLMRQQLQTLLNSGDSAELEGRFAGRLAFGTAGLRGVVGAGPTRMNRLVVQQTSAGLGAYLK AQISDVATRGVVIGYDGRHDSKQFAHDAASVLTAMGIKVYLTANVAATPLVAFGVLHLGTAAGIVVTASHNPPQYNGYKV YWGNGAQIIPPHDSGIAACIDKAATQVIPLLEMPQAKASGQLVMLEEDFYDAYRQGVKLAPVLQNHTQPEAVSLAYTAMH GVGNQMALDVLKDAGFTKVYSVAEQAQPDGDFPTVNFPNPEEKGAMDMVMAEAKKHGAMLACANDPDADRFAVAVRTDSG DYQMLTGDQVGVLFGHYLLTHASENQRLTCTTIVSSSLLSKVAQSLNATCRTTLTGFKWLTNVGMSEETDSNRFLFAYEE ALGYTVGSMVWDKDGLSALVAFAQLTAELASQGQTIWDRLEAIYREHGFHINAQVSIALKPTTPNIGAYLRANPPTEIAG HKVLSTDDISLGKRFFFEGSADGTQEDIALPASDVLIYRLKNGARVIVRPSGTEPKIKCYYEVVESMSKDDSLASAQQRA EVEMARFIEAHQAALPK >Mature_577_residues MDTQLALRVKHWMASDPDPLMRQQLQTLLNSGDSAELEGRFAGRLAFGTAGLRGVVGAGPTRMNRLVVQQTSAGLGAYLK AQISDVATRGVVIGYDGRHDSKQFAHDAASVLTAMGIKVYLTANVAATPLVAFGVLHLGTAAGIVVTASHNPPQYNGYKV YWGNGAQIIPPHDSGIAACIDKAATQVIPLLEMPQAKASGQLVMLEEDFYDAYRQGVKLAPVLQNHTQPEAVSLAYTAMH GVGNQMALDVLKDAGFTKVYSVAEQAQPDGDFPTVNFPNPEEKGAMDMVMAEAKKHGAMLACANDPDADRFAVAVRTDSG DYQMLTGDQVGVLFGHYLLTHASENQRLTCTTIVSSSLLSKVAQSLNATCRTTLTGFKWLTNVGMSEETDSNRFLFAYEE ALGYTVGSMVWDKDGLSALVAFAQLTAELASQGQTIWDRLEAIYREHGFHINAQVSIALKPTTPNIGAYLRANPPTEIAG HKVLSTDDISLGKRFFFEGSADGTQEDIALPASDVLIYRLKNGARVIVRPSGTEPKIKCYYEVVESMSKDDSLASAQQRA EVEMARFIEAHQAALPK
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=609, Percent_Identity=34.9753694581281, Blast_Score=339, Evalue=5e-93, Organism=Homo sapiens, GI31377548, Length=602, Percent_Identity=32.2259136212625, Blast_Score=300, Evalue=3e-81, Organism=Caenorhabditis elegans, GI71993870, Length=561, Percent_Identity=33.5115864527629, Blast_Score=310, Evalue=2e-84, Organism=Caenorhabditis elegans, GI71993878, Length=314, Percent_Identity=35.9872611464968, Blast_Score=202, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6323934, Length=593, Percent_Identity=35.2445193929174, Blast_Score=286, Evalue=6e-78, Organism=Drosophila melanogaster, GI20129809, Length=578, Percent_Identity=35.4671280276817, Blast_Score=318, Evalue=8e-87, Organism=Drosophila melanogaster, GI24651977, Length=562, Percent_Identity=34.8754448398576, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI24653722, Length=574, Percent_Identity=31.3588850174216, Blast_Score=253, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 62163; Mature: 62163
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTQLALRVKHWMASDPDPLMRQQLQTLLNSGDSAELEGRFAGRLAFGTAGLRGVVGAGP CCCCEEEHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCEEECEEEECCCCCCCCCCCCH TRMNRLVVQQTSAGLGAYLKAQISDVATRGVVIGYDGRHDSKQFAHDAASVLTAMGIKVY HHHHHEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEE LTANVAATPLVAFGVLHLGTAAGIVVTASHNPPQYNGYKVYWGNGAQIIPPHDSGIAACI EEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCEEECCCCCCHHHHH DKAATQVIPLLEMPQAKASGQLVMLEEDFYDAYRQGVKLAPVLQNHTQPEAVSLAYTAMH HHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHCCCEEEHHHHCCCCCHHHHHHHHHHH GVGNQMALDVLKDAGFTKVYSVAEQAQPDGDFPTVNFPNPEEKGAMDMVMAEAKKHGAML CCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE ACANDPDADRFAVAVRTDSGDYQMLTGDQVGVLFGHYLLTHASENQRLTCTTIVSSSLLS EECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH KVAQSLNATCRTTLTGFKWLTNVGMSEETDSNRFLFAYEEALGYTVGSMVWDKDGLSALV HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHCCHHHHHEECCCCHHHHH AFAQLTAELASQGQTIWDRLEAIYREHGFHINAQVSIALKPTTPNIGAYLRANPPTEIAG HHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCEEEECCCCCHHCC HKVLSTDDISLGKRFFFEGSADGTQEDIALPASDVLIYRLKNGARVIVRPSGTEPKIKCY CEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHH YEVVESMSKDDSLASAQQRAEVEMARFIEAHQAALPK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDTQLALRVKHWMASDPDPLMRQQLQTLLNSGDSAELEGRFAGRLAFGTAGLRGVVGAGP CCCCEEEHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCEEECEEEECCCCCCCCCCCCH TRMNRLVVQQTSAGLGAYLKAQISDVATRGVVIGYDGRHDSKQFAHDAASVLTAMGIKVY HHHHHEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEE LTANVAATPLVAFGVLHLGTAAGIVVTASHNPPQYNGYKVYWGNGAQIIPPHDSGIAACI EEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCEEECCCCCCHHHHH DKAATQVIPLLEMPQAKASGQLVMLEEDFYDAYRQGVKLAPVLQNHTQPEAVSLAYTAMH HHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHCCCEEEHHHHCCCCCHHHHHHHHHHH GVGNQMALDVLKDAGFTKVYSVAEQAQPDGDFPTVNFPNPEEKGAMDMVMAEAKKHGAML CCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE ACANDPDADRFAVAVRTDSGDYQMLTGDQVGVLFGHYLLTHASENQRLTCTTIVSSSLLS EECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH KVAQSLNATCRTTLTGFKWLTNVGMSEETDSNRFLFAYEEALGYTVGSMVWDKDGLSALV HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHCCHHHHHEECCCCHHHHH AFAQLTAELASQGQTIWDRLEAIYREHGFHINAQVSIALKPTTPNIGAYLRANPPTEIAG HHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCEEEECCCCCHHCC HKVLSTDDISLGKRFFFEGSADGTQEDIALPASDVLIYRLKNGARVIVRPSGTEPKIKCY CEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHH YEVVESMSKDDSLASAQQRAEVEMARFIEAHQAALPK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]