| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is iaaA [H]
Identifier: 157962256
GI number: 157962256
Start: 2975127
End: 2976212
Strand: Reverse
Name: iaaA [H]
Synonym: Spea_2435
Alternate gene names: 157962256
Gene position: 2976212-2975127 (Counterclockwise)
Preceding gene: 157962259
Following gene: 157962255
Centisome position: 57.52
GC content: 47.05
Gene sequence:
>1086_bases ATGCTCCGTAGTACAGTCTTGCTTGTTTTATCGTCACTCATTTCGACAGGTACCATGGCCAGTGATAAGCCGTTTTCAAT TGCGATTCATGGTGGCGCAGGCACCATCTCTAAGGCTAATTTGACACCCGAGCAGCAAAAATCTTATCGCGACAAACTCC AACAAGCCGTCGACGCGGGTTACGATATTCTCGCAAAAGGGGGGGACAGCTTATCAGCCGTTCGTGCATCGATTAATATC CTAGAAAATAGTCCGCTATTTAATGCGGGGCTCGGCGCTGTGTATACCTATGATGGCAGCCACGAGATGGACGCGTCGAT TATGGATGGAAAAACCATGAATGCCGGAGCGGTGGCCGGAGTGAAACATATTAAAAATCCAATTGATTTAGCAATGACTG TAATGGAAAAATCTCCTCATGTGATGCTATCTGGCCAAGGTGCAGAGGAATTTGCACTGACTCAGGGTTTTCAATTAGTG CCAGTTAATTCATTTGATACTGAAAGCCGTTATCAGCAGTTAAAGAGTGCTAAAGAGAAAATTCAAAAAGCGGAGTCGAG CCCTGAATATCAAGCAAGCACAGGATTGAGTACAGGCTCTAGTACTGGCCCTAATTCTCACCATAATTATAAACAAAGTG CCCTCGATTATAGCGAGTTTGACTATAAGTTCGGTACTGTGGGCGCAGTAGCCCTAGATCAAAATGGTAATTTAGCGGCA GGAACCTCAACTGGGGGCATGACGGCAAAGCGATTTGGCCGCATTGGAGACTCGCCCATTATAGGTGCTGGCACCTATGC CGAGAACGGTGTTTGCGCCGTGTCGGCAACTGGCCACGGAGAGTACTTTATTCGCTACCATGTGGCGGGGGATATTTGCG CTAAGGTGAAATATCAGAAGAAATCGATTATTCAAGCAGCCGATGAAGTGATTAATCAACGGCTTATTACGGCTGGTGGC ACTGGCGGTGTGATCGCCATCGATCAACGCGGCAATATCGCCACGCCCTTTAACACTGAGGGCATGTACCGAGCTACACG AAAAAATAATGAACCTGCGCAAGTGATGATCTGGTCAGATTTATAA
Upstream 100 bases:
>100_bases AGAATCGTTAACTCAAGCAAGTTGCTGATTGTAATTATGGCCGAAAATGGTTACAAAGAGAGCAAATAAATACAATAGGA TACAGTTTGTGAAGTATACG
Downstream 100 bases:
>100_bases CCAACTTGTGAACATTCATTTTACTCACTTTATCTATGACGACGCGCACTTAAGTTCACTATTCTGAGCTTGGTGCGCTT TTACACGCTTTAGTATTTTG
Product: asparaginase
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MLRSTVLLVLSSLISTGTMASDKPFSIAIHGGAGTISKANLTPEQQKSYRDKLQQAVDAGYDILAKGGDSLSAVRASINI LENSPLFNAGLGAVYTYDGSHEMDASIMDGKTMNAGAVAGVKHIKNPIDLAMTVMEKSPHVMLSGQGAEEFALTQGFQLV PVNSFDTESRYQQLKSAKEKIQKAESSPEYQASTGLSTGSSTGPNSHHNYKQSALDYSEFDYKFGTVGAVALDQNGNLAA GTSTGGMTAKRFGRIGDSPIIGAGTYAENGVCAVSATGHGEYFIRYHVAGDICAKVKYQKKSIIQAADEVINQRLITAGG TGGVIAIDQRGNIATPFNTEGMYRATRKNNEPAQVMIWSDL
Sequences:
>Translated_361_residues MLRSTVLLVLSSLISTGTMASDKPFSIAIHGGAGTISKANLTPEQQKSYRDKLQQAVDAGYDILAKGGDSLSAVRASINI LENSPLFNAGLGAVYTYDGSHEMDASIMDGKTMNAGAVAGVKHIKNPIDLAMTVMEKSPHVMLSGQGAEEFALTQGFQLV PVNSFDTESRYQQLKSAKEKIQKAESSPEYQASTGLSTGSSTGPNSHHNYKQSALDYSEFDYKFGTVGAVALDQNGNLAA GTSTGGMTAKRFGRIGDSPIIGAGTYAENGVCAVSATGHGEYFIRYHVAGDICAKVKYQKKSIIQAADEVINQRLITAGG TGGVIAIDQRGNIATPFNTEGMYRATRKNNEPAQVMIWSDL >Mature_361_residues MLRSTVLLVLSSLISTGTMASDKPFSIAIHGGAGTISKANLTPEQQKSYRDKLQQAVDAGYDILAKGGDSLSAVRASINI LENSPLFNAGLGAVYTYDGSHEMDASIMDGKTMNAGAVAGVKHIKNPIDLAMTVMEKSPHVMLSGQGAEEFALTQGFQLV PVNSFDTESRYQQLKSAKEKIQKAESSPEYQASTGLSTGSSTGPNSHHNYKQSALDYSEFDYKFGTVGAVALDQNGNLAA GTSTGGMTAKRFGRIGDSPIIGAGTYAENGVCAVSATGHGEYFIRYHVAGDICAKVKYQKKSIIQAADEVINQRLITAGG TGGVIAIDQRGNIATPFNTEGMYRATRKNNEPAQVMIWSDL
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=328, Percent_Identity=37.1951219512195, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI145275200, Length=328, Percent_Identity=37.1951219512195, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI98991769, Length=333, Percent_Identity=30.6306306306306, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI285002251, Length=243, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI285002253, Length=243, Percent_Identity=31.6872427983539, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI1787050, Length=319, Percent_Identity=48.2758620689655, Blast_Score=290, Evalue=9e-80, Organism=Caenorhabditis elegans, GI17569239, Length=247, Percent_Identity=29.1497975708502, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI18921183, Length=321, Percent_Identity=34.2679127725857, Blast_Score=171, Evalue=6e-43, Organism=Drosophila melanogaster, GI21357893, Length=279, Percent_Identity=33.6917562724014, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI221330102, Length=245, Percent_Identity=34.2857142857143, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24652135, Length=245, Percent_Identity=34.2857142857143, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24655553, Length=226, Percent_Identity=31.858407079646, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24657358, Length=240, Percent_Identity=27.0833333333333, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 38238; Mature: 38238
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSTVLLVLSSLISTGTMASDKPFSIAIHGGAGTISKANLTPEQQKSYRDKLQQAVDAG CCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCC YDILAKGGDSLSAVRASINILENSPLFNAGLGAVYTYDGSHEMDASIMDGKTMNAGAVAG CEEEECCCCHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCHHHH VKHIKNPIDLAMTVMEKSPHVMLSGQGAEEFALTQGFQLVPVNSFDTESRYQQLKSAKEK HHHHCCHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH IQKAESSPEYQASTGLSTGSSTGPNSHHNYKQSALDYSEFDYKFGTVGAVALDQNGNLAA HHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCHHHCCEECCCEEEEEECCCCCEEE GTSTGGMTAKRFGRIGDSPIIGAGTYAENGVCAVSATGHGEYFIRYHVAGDICAKVKYQK CCCCCCCHHHHHCCCCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHH KSIIQAADEVINQRLITAGGTGGVIAIDQRGNIATPFNTEGMYRATRKNNEPAQVMIWSD HHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCCCCCCEEHHCCCCCCCEEEEEEC L C >Mature Secondary Structure MLRSTVLLVLSSLISTGTMASDKPFSIAIHGGAGTISKANLTPEQQKSYRDKLQQAVDAG CCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCC YDILAKGGDSLSAVRASINILENSPLFNAGLGAVYTYDGSHEMDASIMDGKTMNAGAVAG CEEEECCCCHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCHHHH VKHIKNPIDLAMTVMEKSPHVMLSGQGAEEFALTQGFQLVPVNSFDTESRYQQLKSAKEK HHHHCCHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH IQKAESSPEYQASTGLSTGSSTGPNSHHNYKQSALDYSEFDYKFGTVGAVALDQNGNLAA HHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCHHHCCEECCCEEEEEECCCCCEEE GTSTGGMTAKRFGRIGDSPIIGAGTYAENGVCAVSATGHGEYFIRYHVAGDICAKVKYQK CCCCCCCHHHHHCCCCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHH KSIIQAADEVINQRLITAGGTGGVIAIDQRGNIATPFNTEGMYRATRKNNEPAQVMIWSD HHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCCCCCCEEHHCCCCCCCEEEEEEC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]