| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962117
Identifier: 157962117
GI number: 157962117
Start: 2784744
End: 2787185
Strand: Reverse
Name: 157962117
Synonym: Spea_2296
Alternate gene names: NA
Gene position: 2787185-2784744 (Counterclockwise)
Preceding gene: 157962118
Following gene: 157962113
Centisome position: 53.86
GC content: 45.78
Gene sequence:
>2442_bases ATGAAATTATCTAAATCTACACTGGCAATCGCCATGTTTTTAAGCTCTGGCAGTGTCATGGCTGCAGGCCCATTGATTAC TACTGATGGCGCAAATCCTCAGCCCTATAAATGGGACACGTCAGCCGGTTCTATTCCTGTCTATGTTGATGGCGGCGAAG CTTTTACTTTTGATTACGATGGCAGTGTTTTCTTGTCGATTGAACGTGCAAATGAGATCACTCAATTTGCCTTCGATCAG TGGAACAGTGTTGAAACGTCGACGTTTGAGGCTAATATTGCTGGCACCATCGAAGAGCAGGTGGGCATTGCAGATGTGAC CGGGGCAAATGCAGCGCAAATTTATACCGTTGAAAACGGCTATGGTTTCTATGTCTTATATGACACCGACGGCAGTATTT TAGAAGACTTTTTTGGTGTGCCTAAATCTGCGGTACTCGGAATCGCCTTTCCTGAGTGGGCGGACGAAAACGGTAATATT ACAGAAGCGACAGCCGTGCTCAATGGTTGGAATGTTTATGTGCAAGATACAGAAGGTAATCAAGTTGCGGGTGTCTTTAC CCATGAGTTTGGTCACGCCCTTAACTTGTCGCACTCCCAGACGAACGGACAGTTGGCTTACTTAAGCTGGCCCGGTGCGC CGTTATATCCAGGCGTTGCGGGTTGTGATGTTGAATCTATTCATGATTTTGAATATCCCGCTGATTGGGGAGGCAACCCT GCCGATCCTGATATTATCGAAACTATGTTTCCTTATATCCGTCATGATGGCGCGGGTGGCGTGAGTCAAAGCACAGTCAA TGTACTCGATGACCGCGTTTCGATTTCAAACCTATACCCAACTGCCGAATATAAGAGTCAGTTTGGCTCCATTGAAGGGA CATTACGCTTAAAAGATGGTCAAACAGAATACAGCGGTATCAATATCATTGCGCGCAATGTTAATGATCCACTGTTTGAT GCCGTATCTGCTCAATCTGGTAATTTAACTCAGGGTAAGGTGGGACCTGATGGATCATTTAAGATCAATGGTCTAACTCC TGGGCAAAATTATGTTTTATATACCGAAGAGATCTTCCAAGGAGGCTATCCAACTCGCCAAACACCTTTAGTGTCAGTTG CTGAGTATTGGAATGAGGCAGAAGGGAGCAACCCCGCAGTCGATAATGCCTGTGACTTCACTCCTATCCTTGCTGAAGCT GGTAAGGCTAAGCAAGCCGACTTAACCTTTAATGGTTACCATGATGGTATCGAGTTTAGGCCCATAGTTAATGCGTATCT AACGGATCTTGCAAAAAATGGACGCTCTTCCATGGGAGTGATTAACGGTATTGGGTTTACATGGGATGAAAATAAAGGCT TTAACATCCTACCTGATTACATCTCGGCAAGCAGTGGCAAGATGAACCGTAATGGTAAGAAGTTGTTGGTTAATTCTGAC TTAGACGGTAATGGTATTAGCGCTCCAGCGATTTGGACTAGTGCCAATGGGGCGATGTCTTTAGGAGATTTTACCGGTAA CACCTGTGGTGGCTCTGGTATGGAGGGCACGCAAGCGGCTTCTGCTTGGGATATCGATGATGCGGGTAATACCGTTGTAG GATTGGCCTACAAAGATGTTAATAACAACGGTTATTGCACTGAGTATGGCGAAGGTGAGCTGGTGCCATTTATTTGGACC CCAAAAGCCGGTATGCATGAATTAGACACCCGAGATGTTAACTGGGATAAATATAGCTGGGTACGAGCACATTCTATCTC TGGTAATGGTGACGTAGTGCTGGGTTCTGCTGACGGTTGGGAAGCGGTAGCCTGGGTTAATGAAGGTCGAATGATCAATC TTTATGATGAGGTTGGCGCGACTGAATCTCATGCTTCTTCTTACGATGGTAAAATGGTTGCCCTAGCGACCGAGCAAGGC AATACCTTACTTTGGGATCATACTAAAAAAGGTGATGCGGCATTTACCGATATCGGTGGCCTAACTTGGTGTGAAGACAT TCCATTCTTATGGTGGGGCCAAGACTTGTGTGAACTCGAAAGTCCTGAATGGGTACAAAGCACATTTGGTGCAGTTCCTG CCTCTCCGTTTGATATGACTGATGATGGCAGTGTCATCATTGCACGAGCGGGCGATTTTTGGGCTGGATTTGTGGGTGCA ATCTACATCGACACCATTGGCTGGATGCCTTTAACCGAATTTTTTGGCAAGCAGGGAGTCATGGAAGCTGAAAATGCTTA TATGAACAACCCATTGTCAATCAGTGGTTCAGGCTCTGAAATGGTAGGCGGAATTGCTGGCGTGCACATGTCTTACCATG TCAACATGGATCAGGTCTATGTGTGCGAAAATGGGCAATCGGTAAAAACAGGTTTCCCTAAAGGCTTAATTAATAAGGTT AAGTCCGGCGCTGAGTTTGGCCGATGCGAACATATTGATTAA
Upstream 100 bases:
>100_bases ATATGATGACCAACCCTAAGGCTATCAGTGCAACTTTCTTTATGAGTGTTGTTGGGCGCGCCGTTTCACAGCAATGGATT GACAATGGGAAGATGAAATA
Downstream 100 bases:
>100_bases TGAGCTAATCTAGTAAGCCACTCAAGTTTGTTTGAGTGGCTTAATTAGCTGGTACGGCTAATTTAAAGATCTTCCTCGCA ATATAATGTAGTCAATTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 813; Mature: 813
Protein sequence:
>813_residues MKLSKSTLAIAMFLSSGSVMAAGPLITTDGANPQPYKWDTSAGSIPVYVDGGEAFTFDYDGSVFLSIERANEITQFAFDQ WNSVETSTFEANIAGTIEEQVGIADVTGANAAQIYTVENGYGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNI TEATAVLNGWNVYVQDTEGNQVAGVFTHEFGHALNLSHSQTNGQLAYLSWPGAPLYPGVAGCDVESIHDFEYPADWGGNP ADPDIIETMFPYIRHDGAGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDGQTEYSGINIIARNVNDPLFD AVSAQSGNLTQGKVGPDGSFKINGLTPGQNYVLYTEEIFQGGYPTRQTPLVSVAEYWNEAEGSNPAVDNACDFTPILAEA GKAKQADLTFNGYHDGIEFRPIVNAYLTDLAKNGRSSMGVINGIGFTWDENKGFNILPDYISASSGKMNRNGKKLLVNSD LDGNGISAPAIWTSANGAMSLGDFTGNTCGGSGMEGTQAASAWDIDDAGNTVVGLAYKDVNNNGYCTEYGEGELVPFIWT PKAGMHELDTRDVNWDKYSWVRAHSISGNGDVVLGSADGWEAVAWVNEGRMINLYDEVGATESHASSYDGKMVALATEQG NTLLWDHTKKGDAAFTDIGGLTWCEDIPFLWWGQDLCELESPEWVQSTFGAVPASPFDMTDDGSVIIARAGDFWAGFVGA IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVHMSYHVNMDQVYVCENGQSVKTGFPKGLINKV KSGAEFGRCEHID
Sequences:
>Translated_813_residues MKLSKSTLAIAMFLSSGSVMAAGPLITTDGANPQPYKWDTSAGSIPVYVDGGEAFTFDYDGSVFLSIERANEITQFAFDQ WNSVETSTFEANIAGTIEEQVGIADVTGANAAQIYTVENGYGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNI TEATAVLNGWNVYVQDTEGNQVAGVFTHEFGHALNLSHSQTNGQLAYLSWPGAPLYPGVAGCDVESIHDFEYPADWGGNP ADPDIIETMFPYIRHDGAGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDGQTEYSGINIIARNVNDPLFD AVSAQSGNLTQGKVGPDGSFKINGLTPGQNYVLYTEEIFQGGYPTRQTPLVSVAEYWNEAEGSNPAVDNACDFTPILAEA GKAKQADLTFNGYHDGIEFRPIVNAYLTDLAKNGRSSMGVINGIGFTWDENKGFNILPDYISASSGKMNRNGKKLLVNSD LDGNGISAPAIWTSANGAMSLGDFTGNTCGGSGMEGTQAASAWDIDDAGNTVVGLAYKDVNNNGYCTEYGEGELVPFIWT PKAGMHELDTRDVNWDKYSWVRAHSISGNGDVVLGSADGWEAVAWVNEGRMINLYDEVGATESHASSYDGKMVALATEQG NTLLWDHTKKGDAAFTDIGGLTWCEDIPFLWWGQDLCELESPEWVQSTFGAVPASPFDMTDDGSVIIARAGDFWAGFVGA IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVHMSYHVNMDQVYVCENGQSVKTGFPKGLINKV KSGAEFGRCEHID >Mature_813_residues MKLSKSTLAIAMFLSSGSVMAAGPLITTDGANPQPYKWDTSAGSIPVYVDGGEAFTFDYDGSVFLSIERANEITQFAFDQ WNSVETSTFEANIAGTIEEQVGIADVTGANAAQIYTVENGYGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNI TEATAVLNGWNVYVQDTEGNQVAGVFTHEFGHALNLSHSQTNGQLAYLSWPGAPLYPGVAGCDVESIHDFEYPADWGGNP ADPDIIETMFPYIRHDGAGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDGQTEYSGINIIARNVNDPLFD AVSAQSGNLTQGKVGPDGSFKINGLTPGQNYVLYTEEIFQGGYPTRQTPLVSVAEYWNEAEGSNPAVDNACDFTPILAEA GKAKQADLTFNGYHDGIEFRPIVNAYLTDLAKNGRSSMGVINGIGFTWDENKGFNILPDYISASSGKMNRNGKKLLVNSD LDGNGISAPAIWTSANGAMSLGDFTGNTCGGSGMEGTQAASAWDIDDAGNTVVGLAYKDVNNNGYCTEYGEGELVPFIWT PKAGMHELDTRDVNWDKYSWVRAHSISGNGDVVLGSADGWEAVAWVNEGRMINLYDEVGATESHASSYDGKMVALATEQG NTLLWDHTKKGDAAFTDIGGLTWCEDIPFLWWGQDLCELESPEWVQSTFGAVPASPFDMTDDGSVIIARAGDFWAGFVGA IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVHMSYHVNMDQVYVCENGQSVKTGFPKGLINKV KSGAEFGRCEHID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87369; Mature: 87369
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSKSTLAIAMFLSSGSVMAAGPLITTDGANPQPYKWDTSAGSIPVYVDGGEAFTFDYD CCCCCCEEEEEEEECCCCEEEECCEEECCCCCCCCEEECCCCCCEEEEEECCEEEEEECC GSVFLSIERANEITQFAFDQWNSVETSTFEANIAGTIEEQVGIADVTGANAAQIYTVENG CEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEEEEEHHHHCCEEEECCCCCEEEEEEECC YGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNITEATAVLNGWNVYVQDTEGN EEEEEEECCCCHHHHHHHCCCCHHEEEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCC QVAGVFTHEFGHALNLSHSQTNGQLAYLSWPGAPLYPGVAGCDVESIHDFEYPADWGGNP EEEEEEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC ADPDIIETMFPYIRHDGAGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDG CCHHHHHHHHHHHEECCCCCCCHHHHHHHHCCEEHHHCCCCHHHHHHCCCCEEEEEEECC QTEYSGINIIARNVNDPLFDAVSAQSGNLTQGKVGPDGSFKINGLTPGQNYVLYTEEIFQ CCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHC GGYPTRQTPLVSVAEYWNEAEGSNPAVDNACDFTPILAEAGKAKQADLTFNGYHDGIEFR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCEEEC PIVNAYLTDLAKNGRSSMGVINGIGFTWDENKGFNILPDYISASSGKMNRNGKKLLVNSD HHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCEECCHHHCCCCCCCCCCCCEEEEECC LDGNGISAPAIWTSANGAMSLGDFTGNTCGGSGMEGTQAASAWDIDDAGNTVVGLAYKDV CCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC NNNGYCTEYGEGELVPFIWTPKAGMHELDTRDVNWDKYSWVRAHSISGNGDVVLGSADGW CCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCC EAVAWVNEGRMINLYDEVGATESHASSYDGKMVALATEQGNTLLWDHTKKGDAAFTDIGG EEEEEECCCCEEEEHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEECCC LTWCEDIPFLWWGQDLCELESPEWVQSTFGAVPASPFDMTDDGSVIIARAGDFWAGFVGA CCHHHCCCEEECCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVHMSYHVNMDQVY HEEHHCCCCHHHHHHCCCCCCCCCHHHCCCCEEECCCCCHHHCEEEEEEEEEEECCCEEE VCENGQSVKTGFPKGLINKVKSGAEFGRCEHID EECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKLSKSTLAIAMFLSSGSVMAAGPLITTDGANPQPYKWDTSAGSIPVYVDGGEAFTFDYD CCCCCCEEEEEEEECCCCEEEECCEEECCCCCCCCEEECCCCCCEEEEEECCEEEEEECC GSVFLSIERANEITQFAFDQWNSVETSTFEANIAGTIEEQVGIADVTGANAAQIYTVENG CEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEEEEEHHHHCCEEEECCCCCEEEEEEECC YGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNITEATAVLNGWNVYVQDTEGN EEEEEEECCCCHHHHHHHCCCCHHEEEEECCCCCCCCCCEEEEEEEEECCEEEEEECCCC QVAGVFTHEFGHALNLSHSQTNGQLAYLSWPGAPLYPGVAGCDVESIHDFEYPADWGGNP EEEEEEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC ADPDIIETMFPYIRHDGAGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDG CCHHHHHHHHHHHEECCCCCCCHHHHHHHHCCEEHHHCCCCHHHHHHCCCCEEEEEEECC QTEYSGINIIARNVNDPLFDAVSAQSGNLTQGKVGPDGSFKINGLTPGQNYVLYTEEIFQ CCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHC GGYPTRQTPLVSVAEYWNEAEGSNPAVDNACDFTPILAEAGKAKQADLTFNGYHDGIEFR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCEEEC PIVNAYLTDLAKNGRSSMGVINGIGFTWDENKGFNILPDYISASSGKMNRNGKKLLVNSD HHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCEECCHHHCCCCCCCCCCCCEEEEECC LDGNGISAPAIWTSANGAMSLGDFTGNTCGGSGMEGTQAASAWDIDDAGNTVVGLAYKDV CCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC NNNGYCTEYGEGELVPFIWTPKAGMHELDTRDVNWDKYSWVRAHSISGNGDVVLGSADGW CCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCC EAVAWVNEGRMINLYDEVGATESHASSYDGKMVALATEQGNTLLWDHTKKGDAAFTDIGG EEEEEECCCCEEEEHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEECCC LTWCEDIPFLWWGQDLCELESPEWVQSTFGAVPASPFDMTDDGSVIIARAGDFWAGFVGA CCHHHCCCEEECCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVHMSYHVNMDQVY HEEHHCCCCHHHHHHCCCCCCCCCHHHCCCCEEECCCCCHHHCEEEEEEEEEEECCCEEE VCENGQSVKTGFPKGLINKVKSGAEFGRCEHID EECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA