Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is ytmA [H]

Identifier: 157962098

GI number: 157962098

Start: 2757455

End: 2758465

Strand: Reverse

Name: ytmA [H]

Synonym: Spea_2277

Alternate gene names: 157962098

Gene position: 2758465-2757455 (Counterclockwise)

Preceding gene: 157962099

Following gene: 157962096

Centisome position: 53.31

GC content: 36.99

Gene sequence:

>1011_bases
GTGACCAAAAATCTGTTAATCATCCTTTTAGTTATTTTTTCATTTAGTTCTCAAGCAACCAATTTGATCAATGATGAACG
CGTTACTGAGCAAAAAAACTGTTTTACTTGGATTTTCACTGATTATGATTCATGGCGTAATGGCATGGAGAAAAAATTTA
AAAGGAAAATAAACTCTGAGGAAAAGCTTAAACAAACTTTAGCTCGTTTTGATTCGCGCTTTGGTAAGGAAAAGTTTGAT
CTTTATAAGACTAATTTATCCTGCTCTACTTTTGAATACCTTGTAGATGGCAATGTCGTAAAGGGCTATATCATAAAGCC
AAAAGTATCTACAGAGAAGTTGCCAGTACTGATTTATAATCGTGGCGGTAACGGCAACTTTGGTGGTGTTGTTTTCGGCT
CAATGATGAATAACTTGTTTCCTATTGCTAACGAAGGATTTGTGATTATTGGTAGCCAATATCGTGGGACTTTTAATAGT
CAGTCAACTGCCCATGATGAATTTGGAGGAAGTGATATCAATGATGTCATCGCCTTAATGGATTTCATCCCTAGTATTGA
AGGAGCTGATGCGCAACGTATTGGCATGTACGGCGCAAGTCGTGGTGGAATGCAAACTCATTTAGCAGTGAAAAAAGTCA
ATAATATAAAAGCCATAGCAACTATTTCAAGTAATTCCGATCTGCAAAAAGGGCTAACTTACCGCCCTGAAATGGAAAAA
GTATATTTGCACCGAATTCCAAACTACGAGCAGAATAAAGTCGCAGAACTACAAAAACGGTCGGTATTAAACTGGGTCAG
TGAATTATCTCCCACCATGCCTATCTTACTTATACACGGTACTAATGATAAACGCGTCTCTGTTAAGCACTCAATGGACC
TCGCCGACGCGTTATCAACCAACAACATACCTCATAAGCTAGTGATATATCCTGAAGATAATCATTTCTTGGATAAGAAT
AAAGAAACAGCTGAAAAAGAACTGGTTAATTGGTTTAAAGACTATCTATAA

Upstream 100 bases:

>100_bases
GTCTGTGGCAAGTTTCTAAAACTCTTCGAAAAAATTTTTGCGGCTTTGTTTAAATAATATCGTATCAATACCAACCTTTA
ATCACCGACATGGAGTTCAT

Downstream 100 bases:

>100_bases
CAAGTCACTGAAATGCATATACTCAGAATGGAGTCGACATGAAAAAAAATGCTTTATCAAAATCCAGCCATTATTTTATT
GGATCGATGATTATGCTTTT

Product: peptidase S15

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSEEKLKQTLARFDSRFGKEKFD
LYKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYNRGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNS
QSTAHDEFGGSDINDVIALMDFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEK
VYLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALSTNNIPHKLVIYPEDNHFLDKN
KETAEKELVNWFKDYL

Sequences:

>Translated_336_residues
MTKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSEEKLKQTLARFDSRFGKEKFD
LYKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYNRGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNS
QSTAHDEFGGSDINDVIALMDFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEK
VYLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALSTNNIPHKLVIYPEDNHFLDKN
KETAEKELVNWFKDYL
>Mature_335_residues
TKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSEEKLKQTLARFDSRFGKEKFDL
YKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYNRGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNSQ
STAHDEFGGSDINDVIALMDFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEKV
YLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALSTNNIPHKLVIYPEDNHFLDKNK
ETAEKELVNWFKDYL

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002471
- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 38208; Mature: 38077

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSE
CCCHHHHHHHHHHHCCCHHHHHHCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCH
EKLKQTLARFDSRFGKEKFDLYKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYN
HHHHHHHHHHHHHHCCHHHHHEECCCCHHHHHHEECCCEEEEEEECCCCCCCCCCEEEEE
RGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNSQSTAHDEFGGSDINDVIALM
CCCCCCCCCEEHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEK
HHHCCCCCCCCHHEECCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHCCCCCCCHHH
VYLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALST
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHC
NNIPHKLVIYPEDNHFLDKNKETAEKELVNWFKDYL
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSE
CCHHHHHHHHHHHCCCHHHHHHCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCH
EKLKQTLARFDSRFGKEKFDLYKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYN
HHHHHHHHHHHHHHCCHHHHHEECCCCHHHHHHEECCCEEEEEEECCCCCCCCCCEEEEE
RGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNSQSTAHDEFGGSDINDVIALM
CCCCCCCCCEEHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEK
HHHCCCCCCCCHHEECCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHCCCCCCCHHH
VYLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALST
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHC
NNIPHKLVIYPEDNHFLDKNKETAEKELVNWFKDYL
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]