| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962078
Identifier: 157962078
GI number: 157962078
Start: 2736417
End: 2737544
Strand: Reverse
Name: 157962078
Synonym: Spea_2257
Alternate gene names: NA
Gene position: 2737544-2736417 (Counterclockwise)
Preceding gene: 157962080
Following gene: 157962077
Centisome position: 52.9
GC content: 44.77
Gene sequence:
>1128_bases ATGCGTATTACCGCGAATTTTGATAGTGGAAATATTGAAGTTATCAATCTAGATAATAAAGATGACGTACAGTTAGCGAT CCGCCCAGATGAAGGTGGTGAGTTTTTTCAGTGGTTTAACTTTAAACTCGAAGGTGTGGTGGGTAACCAATACACGCTCA ATATCGTTAATGCAGACAAAGCCTCTTACACTAAAGGTTGGGAAGATTACCAAGCGGTAGCGACTTACGATAGACAAAAT TGGTTTAGACTGCCGACTCAATATAAAGACGGTAAGCTTAGTATTGAAGTTGACTTGGATTGTGATGCGATTCAAATTGC TTACTTCGCGCCTTACAGTTACGAGCGTCACCAAGATCTTCTAGCCGCAGTACAAGTTCACCCACAAGTGAGTCTAGAGC ACTTAGGTTTAACACTAGATGGCCGTGACATGACCCTCGTTAAGATAGGCGACGGTGATGAAGACAAAGCCAACATCTGG ATAACCGCGCGTCAGCACCCTGGTGAGACCATGGCCGAGTGGTTAGTTGAAGGCCTGATGAACAATCTGCTTGATAGCGA TTGCCCGACGGCTAAAGCGCTACTTGATAAGGCAAACTTCTATATCGTACCGAACATGAACCCAGACGGTAGCGCCCGTG GTCATCTGCGTACTAACGCAGTCGGTACAAACCTTAACCGTGAATGGAAAACGCCTTCTCTTGAGAAGAGCCCTGAAGTT CTATATGTGGTTAATAAGATGAAAGAGACTGGCGTTGATCTTTTCTATGATGTGCACGGAGATGAAGGCTTACCGTATGT CTTCTTAGCGGGTTGCGAAGGTGTACCGGCTTTCACAGAGAAAGACGCCGCACGTCAACAAGCGTTTGTTGATGCATTAT TGATGGCAAGCCCTGATTTTCAGGATGATTTTGGTTACGATAAAGACGAGCCAGGCCAAGCAAATCTAACCGTAGCGTCT AACTGGGTTGCTCATACTTTTGGTTGTCTCTCAAACACCCTAGAAATGCCATTTAAAGATAATGCCAATATGCCTGACTT AATGGCAGGCTGGTCACCAGAGCGCTGTATCTATCTTGGTGAAGCGTCATTAATTGCGATGAACGCAGTAGTTGATAAAC TTAAGTAA
Upstream 100 bases:
>100_bases CATTTTGGTTTATTCTATAGCGCAAAGAACGAGAGTTGGCTTGTTTGCAGCGTCAAACAGTAACAGTCACGCCGTATTAG CAAAAGTAAAAGGAAGTGTT
Downstream 100 bases:
>100_bases GACCAAGTGGTCAACTTAAGACGTAACCTTAAGATGTAAACAAAGAGCTAAGAGGTAGCCAATGGCTTTAGTTGATTGTC CTAGCTGTAACAAACGCATT
Product: peptidase M14 carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MRITANFDSGNIEVINLDNKDDVQLAIRPDEGGEFFQWFNFKLEGVVGNQYTLNIVNADKASYTKGWEDYQAVATYDRQN WFRLPTQYKDGKLSIEVDLDCDAIQIAYFAPYSYERHQDLLAAVQVHPQVSLEHLGLTLDGRDMTLVKIGDGDEDKANIW ITARQHPGETMAEWLVEGLMNNLLDSDCPTAKALLDKANFYIVPNMNPDGSARGHLRTNAVGTNLNREWKTPSLEKSPEV LYVVNKMKETGVDLFYDVHGDEGLPYVFLAGCEGVPAFTEKDAARQQAFVDALLMASPDFQDDFGYDKDEPGQANLTVAS NWVAHTFGCLSNTLEMPFKDNANMPDLMAGWSPERCIYLGEASLIAMNAVVDKLK
Sequences:
>Translated_375_residues MRITANFDSGNIEVINLDNKDDVQLAIRPDEGGEFFQWFNFKLEGVVGNQYTLNIVNADKASYTKGWEDYQAVATYDRQN WFRLPTQYKDGKLSIEVDLDCDAIQIAYFAPYSYERHQDLLAAVQVHPQVSLEHLGLTLDGRDMTLVKIGDGDEDKANIW ITARQHPGETMAEWLVEGLMNNLLDSDCPTAKALLDKANFYIVPNMNPDGSARGHLRTNAVGTNLNREWKTPSLEKSPEV LYVVNKMKETGVDLFYDVHGDEGLPYVFLAGCEGVPAFTEKDAARQQAFVDALLMASPDFQDDFGYDKDEPGQANLTVAS NWVAHTFGCLSNTLEMPFKDNANMPDLMAGWSPERCIYLGEASLIAMNAVVDKLK >Mature_375_residues MRITANFDSGNIEVINLDNKDDVQLAIRPDEGGEFFQWFNFKLEGVVGNQYTLNIVNADKASYTKGWEDYQAVATYDRQN WFRLPTQYKDGKLSIEVDLDCDAIQIAYFAPYSYERHQDLLAAVQVHPQVSLEHLGLTLDGRDMTLVKIGDGDEDKANIW ITARQHPGETMAEWLVEGLMNNLLDSDCPTAKALLDKANFYIVPNMNPDGSARGHLRTNAVGTNLNREWKTPSLEKSPEV LYVVNKMKETGVDLFYDVHGDEGLPYVFLAGCEGVPAFTEKDAARQQAFVDALLMASPDFQDDFGYDKDEPGQANLTVAS NWVAHTFGCLSNTLEMPFKDNANMPDLMAGWSPERCIYLGEASLIAMNAVVDKLK
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190194403, Length=334, Percent_Identity=29.6407185628743, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI222352158, Length=340, Percent_Identity=29.1176470588235, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI31657119, Length=303, Percent_Identity=29.3729372937294, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI170763513, Length=322, Percent_Identity=27.3291925465839, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI120444924, Length=323, Percent_Identity=28.1733746130031, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI78482633, Length=288, Percent_Identity=26.3888888888889, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI118421091, Length=289, Percent_Identity=26.643598615917, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533904, Length=364, Percent_Identity=28.5714285714286, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI193202888, Length=281, Percent_Identity=25.2669039145907, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24641847, Length=317, Percent_Identity=28.0757097791798, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI28571179, Length=313, Percent_Identity=28.4345047923323, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI161077807, Length=317, Percent_Identity=28.0757097791798, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24641845, Length=313, Percent_Identity=28.4345047923323, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24651466, Length=274, Percent_Identity=27.7372262773723, Blast_Score=82, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 41973; Mature: 41973
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITANFDSGNIEVINLDNKDDVQLAIRPDEGGEFFQWFNFKLEGVVGNQYTLNIVNADK CEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCEEEEEEEECCC ASYTKGWEDYQAVATYDRQNWFRLPTQYKDGKLSIEVDLDCDAIQIAYFAPYSYERHQDL CCCCCCCHHHHHHEEECCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHH LAAVQVHPQVSLEHLGLTLDGRDMTLVKIGDGDEDKANIWITARQHPGETMAEWLVEGLM HHHEECCCCEEEEHEEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHH NNLLDSDCPTAKALLDKANFYIVPNMNPDGSARGHLRTNAVGTNLNREWKTPSLEKSPEV HHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE LYVVNKMKETGVDLFYDVHGDEGLPYVFLAGCEGVPAFTEKDAARQQAFVDALLMASPDF EEEEEHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC QDDFGYDKDEPGQANLTVASNWVAHTFGCLSNTLEMPFKDNANMPDLMAGWSPERCIYLG CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEC EASLIAMNAVVDKLK CCCEEEHHHHHHHCC >Mature Secondary Structure MRITANFDSGNIEVINLDNKDDVQLAIRPDEGGEFFQWFNFKLEGVVGNQYTLNIVNADK CEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCEEEEEEEECCC ASYTKGWEDYQAVATYDRQNWFRLPTQYKDGKLSIEVDLDCDAIQIAYFAPYSYERHQDL CCCCCCCHHHHHHEEECCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHH LAAVQVHPQVSLEHLGLTLDGRDMTLVKIGDGDEDKANIWITARQHPGETMAEWLVEGLM HHHEECCCCEEEEHEEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHH NNLLDSDCPTAKALLDKANFYIVPNMNPDGSARGHLRTNAVGTNLNREWKTPSLEKSPEV HHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE LYVVNKMKETGVDLFYDVHGDEGLPYVFLAGCEGVPAFTEKDAARQQAFVDALLMASPDF EEEEEHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC QDDFGYDKDEPGQANLTVASNWVAHTFGCLSNTLEMPFKDNANMPDLMAGWSPERCIYLG CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEC EASLIAMNAVVDKLK CCCEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]