| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962058
Identifier: 157962058
GI number: 157962058
Start: 2710313
End: 2712085
Strand: Reverse
Name: 157962058
Synonym: Spea_2237
Alternate gene names: NA
Gene position: 2712085-2710313 (Counterclockwise)
Preceding gene: 157962059
Following gene: 157962057
Centisome position: 52.41
GC content: 44.22
Gene sequence:
>1773_bases ATGAAAAGAGCCGCGCTGCCATTGGCGATAGCGCTTTCTCTGCTAGGCCTTACGGCCTGTCAAAGTCAGCAAACAACAGA ACCCGTAGCGGTCGAGATTACTGATCAAAATTCAGCATTTGCTCAATTTAGCACTAGTTTTATCGATGCCTTGTGGGTTG AATCCCCAACATGGGCCCTATACAGCGGCTTTCACAAGTACGACGGCGTTCTAAAAGTGCCTAACGCCGAAACGAGGCAG GCGAGCCTCACCTTTGTACAGACTCAGCAGCAACAATTGGCAAAGTTCGATCCTAAGTTGATGACCCCTACCATGTTGAC CGATTATCGACTGATTGAGAACCTACTGGCTGAGATGAAGTGGAACATTGAGACCTTTAAGTCCTGGCAATGGGATCCTT CCCGTTACAATGTTTCAGGTGGTTTTGCACAGATAATTAATGAAGACTTTGCTCCTTTAGACGAACGCCTTCGTTCTGTG ATGTTTAGAATGGAAAATGTGCCCGCATATTATGCGGCTGCTCGTGCAAATATTAAAGATCCCACTCTTGAGCACACACA ACTTGCCATTATGCAAAATAAGGGCGCGTTTTCCGTGTTCTCAAATGAGTTACTCGATCAGGCGATTAAATCAGGATTAA CCAATCAAGAGAAGGCGCTATTTGCTAATCGATTTAATGAAGCGACTATCGCTATAAATGAGCACCTTGACTGGTTAAAG GCCTTAGAGTCGAAACTTGACAAGCAAGGGGCGAGAAGTTTCCGTATTGGAGCTGAGCTTTACGAGCAAAAGTTTGCCTA CGATATTCAAGCTGGGATGTCGGGCAAAGCCCTTTATGAAAAAGCCGTAAATGATAAAAACCGTGTCCAAGCTGAAATGG CAAAGATAACGACAAAAATCTGGGGTAAGTATTTTGATACACCAAAACCTAAAGATGACAAGCTAGCGATAAAGGCGCTT ATTGATAAGCTATCGGCTAAGCATGTTAAGCGGGACGATTTTGTTGATGAGGTACGAGCGCAGATCCCTGAACTTGTGGC TTTCGTAAATGAGAAAAACCTAGTGACGCTGGATCCGAATAAGCCTTTGGTTGTGCGTGAAACGCCTGCCTATATGAGAG GCTATGCGGGAGCATCGATCAGTGCGCCTGGACCATATGAAAAATCAGGAAACACCTATTATAACGTTACTCCACTCGAT GGGATGAGTAGTGATTCAGCAGAGAGTTACTTACGTGAATATAATCACTGGATCCTGCAAGTGCTTAATATCCACGAAGC TATTCCTGGTCACTACACTCAGCTAGTCTACTCCAACGAGTCCCCAAGTCTTATCAAGAGTCTGTTTGGTAATGGCGCCA TGGTTGAAGGCTGGGCTGTCTATACCGAACGTATGATGCTTGAAGAGGGTTATGGTGATTTTGAGCCTGAAATGTGGCTC ATGTACTACAAATGGAATTTACGCGTGATCTGTAACACTATTCTCGATTACAGTATCCAAGTAAAAGGCATGACTGAAGA GCAAGCGTTAGACTTGATGATGAATGAAGCCTTTCAGCAGCAAGCTGAAGCCGAAGGTAAATGGCGTAGAGCAACGCTGA GTCAGGTTCAGCTGACTAGCTATTATTCAGGTTATCGTGAGATCTATGACTTTAGAGAAGAGTATAAGGCGCTAAAGGGT GATGATTTCGATTTAAAAGCTTTCCATGAAGAGTTTTTGAGTTACGGCAGTGCTCCAGTTAAATATATCCGAGAGCTGAT GTTAAGTAAGTAA
Upstream 100 bases:
>100_bases AAAATAAGCATAGTTACTGAAAAAATCACCAGAACATGATTTACTGAGAGGGCATTAAAAGTGGCAAAGACCACGAACTA ACAAATTAAGGGATCACAAT
Downstream 100 bases:
>100_bases TCAAAATCTTTGTCTCCAATAGGCCAGTTTGCTACCGCAGCTGGCCTTTTTTGTTCTTGTAATGATTATTAGGCTCGTAG AGCTAAATCAATTTAATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MKRAALPLAIALSLLGLTACQSQQTTEPVAVEITDQNSAFAQFSTSFIDALWVESPTWALYSGFHKYDGVLKVPNAETRQ ASLTFVQTQQQQLAKFDPKLMTPTMLTDYRLIENLLAEMKWNIETFKSWQWDPSRYNVSGGFAQIINEDFAPLDERLRSV MFRMENVPAYYAAARANIKDPTLEHTQLAIMQNKGAFSVFSNELLDQAIKSGLTNQEKALFANRFNEATIAINEHLDWLK ALESKLDKQGARSFRIGAELYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITTKIWGKYFDTPKPKDDKLAIKAL IDKLSAKHVKRDDFVDEVRAQIPELVAFVNEKNLVTLDPNKPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLD GMSSDSAESYLREYNHWILQVLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGDFEPEMWL MYYKWNLRVICNTILDYSIQVKGMTEEQALDLMMNEAFQQQAEAEGKWRRATLSQVQLTSYYSGYREIYDFREEYKALKG DDFDLKAFHEEFLSYGSAPVKYIRELMLSK
Sequences:
>Translated_590_residues MKRAALPLAIALSLLGLTACQSQQTTEPVAVEITDQNSAFAQFSTSFIDALWVESPTWALYSGFHKYDGVLKVPNAETRQ ASLTFVQTQQQQLAKFDPKLMTPTMLTDYRLIENLLAEMKWNIETFKSWQWDPSRYNVSGGFAQIINEDFAPLDERLRSV MFRMENVPAYYAAARANIKDPTLEHTQLAIMQNKGAFSVFSNELLDQAIKSGLTNQEKALFANRFNEATIAINEHLDWLK ALESKLDKQGARSFRIGAELYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITTKIWGKYFDTPKPKDDKLAIKAL IDKLSAKHVKRDDFVDEVRAQIPELVAFVNEKNLVTLDPNKPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLD GMSSDSAESYLREYNHWILQVLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGDFEPEMWL MYYKWNLRVICNTILDYSIQVKGMTEEQALDLMMNEAFQQQAEAEGKWRRATLSQVQLTSYYSGYREIYDFREEYKALKG DDFDLKAFHEEFLSYGSAPVKYIRELMLSK >Mature_590_residues MKRAALPLAIALSLLGLTACQSQQTTEPVAVEITDQNSAFAQFSTSFIDALWVESPTWALYSGFHKYDGVLKVPNAETRQ ASLTFVQTQQQQLAKFDPKLMTPTMLTDYRLIENLLAEMKWNIETFKSWQWDPSRYNVSGGFAQIINEDFAPLDERLRSV MFRMENVPAYYAAARANIKDPTLEHTQLAIMQNKGAFSVFSNELLDQAIKSGLTNQEKALFANRFNEATIAINEHLDWLK ALESKLDKQGARSFRIGAELYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITTKIWGKYFDTPKPKDDKLAIKAL IDKLSAKHVKRDDFVDEVRAQIPELVAFVNEKNLVTLDPNKPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLD GMSSDSAESYLREYNHWILQVLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGDFEPEMWL MYYKWNLRVICNTILDYSIQVKGMTEEQALDLMMNEAFQQQAEAEGKWRRATLSQVQLTSYYSGYREIYDFREEYKALKG DDFDLKAFHEEFLSYGSAPVKYIRELMLSK
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67430; Mature: 67430
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAALPLAIALSLLGLTACQSQQTTEPVAVEITDQNSAFAQFSTSFIDALWVESPTWAL CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHH YSGFHKYDGVLKVPNAETRQASLTFVQTQQQQLAKFDPKLMTPTMLTDYRLIENLLAEMK HHCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC WNIETFKSWQWDPSRYNVSGGFAQIINEDFAPLDERLRSVMFRMENVPAYYAAARANIKD CCHHHHHCCCCCCCCEECCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCC PTLEHTQLAIMQNKGAFSVFSNELLDQAIKSGLTNQEKALFANRFNEATIAINEHLDWLK CCCCHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEHHHHHHHH ALESKLDKQGARSFRIGAELYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITTKI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH WGKYFDTPKPKDDKLAIKALIDKLSAKHVKRDDFVDEVRAQIPELVAFVNEKNLVTLDPN HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCC KPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLDGMSSDSAESYLREYNHWILQ CCEEEECCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH VLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGDFEPEMWL HHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEE MYYKWNLRVICNTILDYSIQVKGMTEEQALDLMMNEAFQQQAEAEGKWRRATLSQVQLTS EEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YYSGYREIYDFREEYKALKGDDFDLKAFHEEFLSYGSAPVKYIRELMLSK HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MKRAALPLAIALSLLGLTACQSQQTTEPVAVEITDQNSAFAQFSTSFIDALWVESPTWAL CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHH YSGFHKYDGVLKVPNAETRQASLTFVQTQQQQLAKFDPKLMTPTMLTDYRLIENLLAEMK HHCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC WNIETFKSWQWDPSRYNVSGGFAQIINEDFAPLDERLRSVMFRMENVPAYYAAARANIKD CCHHHHHCCCCCCCCEECCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCC PTLEHTQLAIMQNKGAFSVFSNELLDQAIKSGLTNQEKALFANRFNEATIAINEHLDWLK CCCCHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEHHHHHHHH ALESKLDKQGARSFRIGAELYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITTKI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH WGKYFDTPKPKDDKLAIKALIDKLSAKHVKRDDFVDEVRAQIPELVAFVNEKNLVTLDPN HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCC KPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLDGMSSDSAESYLREYNHWILQ CCEEEECCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH VLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGDFEPEMWL HHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEE MYYKWNLRVICNTILDYSIQVKGMTEEQALDLMMNEAFQQQAEAEGKWRRATLSQVQLTS EEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YYSGYREIYDFREEYKALKGDDFDLKAFHEEFLSYGSAPVKYIRELMLSK HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA