Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962032

Identifier: 157962032

GI number: 157962032

Start: 2684377

End: 2685669

Strand: Reverse

Name: 157962032

Synonym: Spea_2211

Alternate gene names: NA

Gene position: 2685669-2684377 (Counterclockwise)

Preceding gene: 157962033

Following gene: 157962031

Centisome position: 51.9

GC content: 46.09

Gene sequence:

>1293_bases
ATGCAATTACCTCCAGTTATCCCGCTTTTTGATTCAATCGACTACATTCAAATTGGCAATCCGCTGGTCAATCAACATAT
CACTCAACTTAGCTTGGGGGATCTCGATGAAGCCGGTTTAGTGTTTGAACACGCTACAGATTGGCTATTCGAGCAAAAAT
ACAATGAAAACAACTATAAAGCCTATCGAAGCGAACTAACCACCTTCCTGCACTGGTGTTTTGATGTAATAAAACTCAAC
GTTAGTGCAATAGGGCGCCGAGAAGTCGGCCTATATATAGAGTATTGTAAAAATCCGCCAACCGAACTTATTGGCTATTT
TAACGTGGCCCAATTCAAGCAGGACAAGACGAGCGACGAACGAACGCCAAACCCGGCTTGGCTGCCATTTAGAGGTAAGA
AAGTCGACGGGCAAATTCAGCCGTATGCTCTCAGCGACAGTGCTCTCAAGACCAAAGTTGCGATTCTATCTAGCTTCTAT
AGCTACCTAATGGGCGAGGATTACTGCGAGAAAAATCCAGCGCAGATGTGGCTTAATAAGAGTCGATTCTCATCAAGGCA
GAAGTACCGACTCAACACAGATGATGATAACCAGTTGGCGTTTACCGAGCTGCAATGGTCCTACATCATGTCAACGGTTG
AGAAGTTAGCCAAAGCACAGCCAGAACTTCATCAACGCAGTCTGTTTCTAATCAAGCTTATCTACTCCTGCTATCTGCGG
GTATCAGAAGTTTCAGCAAGGGCTGGTTTCTCACCGGTGATGAGTCAGTTTAAACAAAACCGCCAGACCGGAATTTGGAG
CTTTTATATTCCAAAGAGTAAAGGCGGCAAGAGCAGAAGCGTTGCCGTATCTAAGGCATTAATCGATGCGTTAACGCAAT
ATCGTAGCTACTTAAAACTGTCGCCACTACCAACAAGCAACGAGCAACATCCGCTAATCGTGCGCCAAAAAGCGGCGGGG
CGAGGGCGCGAAGTCGGCAACTTAAATGCCAACCTGGGGATCCGACAAATTCGAGAAGAAGTGGATAAGATCATCGTAAT
TGCGGCGAATAGCATCGAAACTGACGGCTTTTGTGAGGATGCACTACAAATGCGCGGCTTAAGTATTCACAATATTCGCC
ACACAGGGATCACCCACGACATCAATATTAACGGTCGACCATTGTCACACGTACAGGCCGATGCGGGTCATGAGAGTATC
GACACCACATCGCAATATCTGCACACTACACAGATAGAGCGTCATGAGAGTGCGCAGAATAAACCGTTAGATTATCTGCA
GGGAATTGAGTAA

Upstream 100 bases:

>100_bases
AATAAGTAGTCATATAAGGTTAATTAAGGATATCGCTTTTTAACCTTACTGATTAATATAGAGATATCGGCTTTTATACT
TTCTATATCCATCTATACCT

Downstream 100 bases:

>100_bases
GAGCGGACGTAGCCACCTAAAACAAATTCCGCAGGAGGCTATGTTTAATGGCGTATAAGCACGCCGTTTCCTTCCATGGA
GGCTCGCTTATCGCATCCCT

Product: integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Integrase/Recombinase Protein; Site Specific Recombinase Phage Integrase Family; Integrase/Recombinase; Integrase / Recombinase Protein; Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase; Site-Specific Tyrosine Integrase/Recombinase; Site-Specific Recombinase XerC; Phage Integrase Family; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MQLPPVIPLFDSIDYIQIGNPLVNQHITQLSLGDLDEAGLVFEHATDWLFEQKYNENNYKAYRSELTTFLHWCFDVIKLN
VSAIGRREVGLYIEYCKNPPTELIGYFNVAQFKQDKTSDERTPNPAWLPFRGKKVDGQIQPYALSDSALKTKVAILSSFY
SYLMGEDYCEKNPAQMWLNKSRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKAQPELHQRSLFLIKLIYSCYLR
VSEVSARAGFSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALIDALTQYRSYLKLSPLPTSNEQHPLIVRQKAAG
RGREVGNLNANLGIRQIREEVDKIIVIAANSIETDGFCEDALQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESI
DTTSQYLHTTQIERHESAQNKPLDYLQGIE

Sequences:

>Translated_430_residues
MQLPPVIPLFDSIDYIQIGNPLVNQHITQLSLGDLDEAGLVFEHATDWLFEQKYNENNYKAYRSELTTFLHWCFDVIKLN
VSAIGRREVGLYIEYCKNPPTELIGYFNVAQFKQDKTSDERTPNPAWLPFRGKKVDGQIQPYALSDSALKTKVAILSSFY
SYLMGEDYCEKNPAQMWLNKSRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKAQPELHQRSLFLIKLIYSCYLR
VSEVSARAGFSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALIDALTQYRSYLKLSPLPTSNEQHPLIVRQKAAG
RGREVGNLNANLGIRQIREEVDKIIVIAANSIETDGFCEDALQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESI
DTTSQYLHTTQIERHESAQNKPLDYLQGIE
>Mature_430_residues
MQLPPVIPLFDSIDYIQIGNPLVNQHITQLSLGDLDEAGLVFEHATDWLFEQKYNENNYKAYRSELTTFLHWCFDVIKLN
VSAIGRREVGLYIEYCKNPPTELIGYFNVAQFKQDKTSDERTPNPAWLPFRGKKVDGQIQPYALSDSALKTKVAILSSFY
SYLMGEDYCEKNPAQMWLNKSRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKAQPELHQRSLFLIKLIYSCYLR
VSEVSARAGFSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALIDALTQYRSYLKLSPLPTSNEQHPLIVRQKAAG
RGREVGNLNANLGIRQIREEVDKIIVIAANSIETDGFCEDALQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESI
DTTSQYLHTTQIERHESAQNKPLDYLQGIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49075; Mature: 49075

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPPVIPLFDSIDYIQIGNPLVNQHITQLSLGDLDEAGLVFEHATDWLFEQKYNENNYK
CCCCCCCHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCHHH
AYRSELTTFLHWCFDVIKLNVSAIGRREVGLYIEYCKNPPTELIGYFNVAQFKQDKTSDE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
RTPNPAWLPFRGKKVDGQIQPYALSDSALKTKVAILSSFYSYLMGEDYCEKNPAQMWLNK
CCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHH
SRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKAQPELHQRSLFLIKLIYSCYLR
HHHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VSEVSARAGFSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALIDALTQYRSYLKL
HHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEE
SPLPTSNEQHPLIVRQKAAGRGREVGNLNANLGIRQIREEVDKIIVIAANSIETDGFCED
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCHHHH
ALQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESIDTTSQYLHTTQIERHESAQN
HHHHCCCEEECEEECCCEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
KPLDYLQGIE
CCHHHHCCCC
>Mature Secondary Structure
MQLPPVIPLFDSIDYIQIGNPLVNQHITQLSLGDLDEAGLVFEHATDWLFEQKYNENNYK
CCCCCCCHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCHHH
AYRSELTTFLHWCFDVIKLNVSAIGRREVGLYIEYCKNPPTELIGYFNVAQFKQDKTSDE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
RTPNPAWLPFRGKKVDGQIQPYALSDSALKTKVAILSSFYSYLMGEDYCEKNPAQMWLNK
CCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHH
SRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKAQPELHQRSLFLIKLIYSCYLR
HHHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VSEVSARAGFSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALIDALTQYRSYLKL
HHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEE
SPLPTSNEQHPLIVRQKAAGRGREVGNLNANLGIRQIREEVDKIIVIAANSIETDGFCED
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCHHHH
ALQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESIDTTSQYLHTTQIERHESAQN
HHHHCCCEEECEEECCCEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
KPLDYLQGIE
CCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA