| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962030
Identifier: 157962030
GI number: 157962030
Start: 2681333
End: 2681905
Strand: Reverse
Name: 157962030
Synonym: Spea_2209
Alternate gene names: NA
Gene position: 2681905-2681333 (Counterclockwise)
Preceding gene: 157962031
Following gene: 157962029
Centisome position: 51.83
GC content: 40.49
Gene sequence:
>573_bases ATGCCTGAACCTGACTTATTGAGCATCAAGACATTTGAAACACCGAAAGAACTCGGTCTCTGGCTTAATACTAATCACGC CTCTGAAAGTGAATTATGGGTAAAGATCTACAAAAAAAACACAGGGATTAAAAGTGTAACTTGGGATGATGTCGTGATTG AAGCTCTATGTTGGGGGTGGATCGACGGTATTAAAAAGTCAATTGATGAGCAAGCCTATCTTCAGCGCATTACTCCCAGA ACAGCGCGAAGCAACTGGTCTAAAAGAAACACAAAGCATGCGGAACGTTTAATTAGTGAGAATAGAATGATGGAACCCGG GCTTATGCATATTCGTGCGGCAAAAGCAGATGGGCGCTGGCAAAAAGCCTATGTGGTAAGTGAAATGGAAGTGCCTACTG ATTTCCTAAGTGTTCTCGATAGTATGCCAAGTGCTAAAGAGTTTTATGAAACTCTTAACAAATCGAGTCGTTATGCTATC GCATATGGACTAATCAGTGCCAAGAAACCTGAAACAAGACTAAGGCGGTTTACAAAATTCATGAATATGCTTGTTAACAA AGAAAAACCATAA
Upstream 100 bases:
>100_bases GTAAGACCACTATGGCGATCATGCCATTTGCTGAGAAAATCGCCCGCCAGCAAATGGTTCACTTATTAGAGGGGCGTTAG GCCAAAGAGAGAGCAACTGA
Downstream 100 bases:
>100_bases TAAGTTGAGTTGGCATAACAAGCGTTTGAGACGGAGCCCCTGCGCCCGACTTTTCGGCTTAGTTCGGTTTTATTGTTTAT GTCACAATGGTAATACGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPEPDLLSIKTFETPKELGLWLNTNHASESELWVKIYKKNTGIKSVTWDDVVIEALCWGWIDGIKKSIDEQAYLQRITPR TARSNWSKRNTKHAERLISENRMMEPGLMHIRAAKADGRWQKAYVVSEMEVPTDFLSVLDSMPSAKEFYETLNKSSRYAI AYGLISAKKPETRLRRFTKFMNMLVNKEKP
Sequences:
>Translated_190_residues MPEPDLLSIKTFETPKELGLWLNTNHASESELWVKIYKKNTGIKSVTWDDVVIEALCWGWIDGIKKSIDEQAYLQRITPR TARSNWSKRNTKHAERLISENRMMEPGLMHIRAAKADGRWQKAYVVSEMEVPTDFLSVLDSMPSAKEFYETLNKSSRYAI AYGLISAKKPETRLRRFTKFMNMLVNKEKP >Mature_189_residues PEPDLLSIKTFETPKELGLWLNTNHASESELWVKIYKKNTGIKSVTWDDVVIEALCWGWIDGIKKSIDEQAYLQRITPRT ARSNWSKRNTKHAERLISENRMMEPGLMHIRAAKADGRWQKAYVVSEMEVPTDFLSVLDSMPSAKEFYETLNKSSRYAIA YGLISAKKPETRLRRFTKFMNMLVNKEKP
Specific function: Unknown
COG id: COG4430
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22086; Mature: 21955
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPDLLSIKTFETPKELGLWLNTNHASESELWVKIYKKNTGIKSVTWDDVVIEALCWGW CCCCCEEEEECCCCHHHHCCEEECCCCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHHHH IDGIKKSIDEQAYLQRITPRTARSNWSKRNTKHAERLISENRMMEPGLMHIRAAKADGRW HHHHHHHHHHHHHHHHHCCHHHHCCCHHCHHHHHHHHHHHCCCCCCCHHEEEECCCCCCC QKAYVVSEMEVPTDFLSVLDSMPSAKEFYETLNKSSRYAIAYGLISAKKPETRLRRFTKF HHHHEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHH MNMLVNKEKP HHHHHCCCCC >Mature Secondary Structure PEPDLLSIKTFETPKELGLWLNTNHASESELWVKIYKKNTGIKSVTWDDVVIEALCWGW CCCCEEEEECCCCHHHHCCEEECCCCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHHHH IDGIKKSIDEQAYLQRITPRTARSNWSKRNTKHAERLISENRMMEPGLMHIRAAKADGRW HHHHHHHHHHHHHHHHHCCHHHHCCCHHCHHHHHHHHHHHCCCCCCCHHEEEECCCCCCC QKAYVVSEMEVPTDFLSVLDSMPSAKEFYETLNKSSRYAIAYGLISAKKPETRLRRFTKF HHHHEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHH MNMLVNKEKP HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA