| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961985
Identifier: 157961985
GI number: 157961985
Start: 2619714
End: 2620526
Strand: Direct
Name: 157961985
Synonym: Spea_2164
Alternate gene names: NA
Gene position: 2619714-2620526 (Clockwise)
Preceding gene: 157961984
Following gene: 157961986
Centisome position: 50.63
GC content: 38.62
Gene sequence:
>813_bases ATGCCTGAACCTATTACAACTGTAGGACTAGGTGCAATTGCTGCGTATTTAGGCAAAGATGGAATAGCAAAGATACTTGG TCCCACAGCCGAGTATCTTGGTGGTGAACTACAAGAGTTCACTAAAAAAAGAATGAATAATGTTGGACAAATCTTCAGTA ATGCAGAAAAAAAGCTAGGAGATAAAGTAGAGCAACCCGGCGCAATTCCACCTAAAGTTCTTAAAACAGTAATAAATGAG GGGTCTTATTCTGAAGATCAAATTGCCGTAGAATACTTCGGTGGTGTCTTAGCATCTTCAAGAACAGAATTATCAAGAGA TGATAGAGGAGCAAGGATAGCGAAAGCATTAGATATTTTGTCGTGCTATCAGCTAAGAGCCCACTATCTAATTTACTCCT CACTCTCGCACCTTTTTAAAAATAAAGGTCAAAGCCTTAGAATGAACGAGCAACGTGATAAATTGGAAATGTTTATACCA TTTGACGGTTTTGCTAATGCAATGGGCTTGACTCAAAAAGAGTGGGATAACCCTCAATTACTAACCCATATTTTTCAGGG GCTTAATTCAGATGGTCTTATCAGTGATCGCTGGGCATTTGGCCCAGTAGATACTTTAAAAACTATGAGTAGCAGCCCAT TAATAACATTACCTGGTATTGTATGCACGCCTACATCAAGTGGTGCAGAACTTTTTCTATGGGGTTTTGGTAGTGGAAAC CAAGATTTAGATTACATTTTCACAAATGATTTTTCTGCAAAGGTTGATGGGACTCCTGAATTAATTCAAGGCGCTCTAGC AACAAAAACATAG
Upstream 100 bases:
>100_bases GTTAGTCTTGAGTAATTAAAGTACTGGCGTTCTGTTCTTATGAAGACCGTTCTTATTCGGAATTCAGCCTAATATACTGT TATGTTTTCAAGGAGGGCGG
Downstream 100 bases:
>100_bases CAAGGTAATCAAACGGCCACGTAACCGTTTTCTCGGTTCCGCTTCGTTATACATTCTAGCCAACTATTACTTGCCGCTTA TTGCTGCGTTATGTTTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPEPITTVGLGAIAAYLGKDGIAKILGPTAEYLGGELQEFTKKRMNNVGQIFSNAEKKLGDKVEQPGAIPPKVLKTVINE GSYSEDQIAVEYFGGVLASSRTELSRDDRGARIAKALDILSCYQLRAHYLIYSSLSHLFKNKGQSLRMNEQRDKLEMFIP FDGFANAMGLTQKEWDNPQLLTHIFQGLNSDGLISDRWAFGPVDTLKTMSSSPLITLPGIVCTPTSSGAELFLWGFGSGN QDLDYIFTNDFSAKVDGTPELIQGALATKT
Sequences:
>Translated_270_residues MPEPITTVGLGAIAAYLGKDGIAKILGPTAEYLGGELQEFTKKRMNNVGQIFSNAEKKLGDKVEQPGAIPPKVLKTVINE GSYSEDQIAVEYFGGVLASSRTELSRDDRGARIAKALDILSCYQLRAHYLIYSSLSHLFKNKGQSLRMNEQRDKLEMFIP FDGFANAMGLTQKEWDNPQLLTHIFQGLNSDGLISDRWAFGPVDTLKTMSSSPLITLPGIVCTPTSSGAELFLWGFGSGN QDLDYIFTNDFSAKVDGTPELIQGALATKT >Mature_269_residues PEPITTVGLGAIAAYLGKDGIAKILGPTAEYLGGELQEFTKKRMNNVGQIFSNAEKKLGDKVEQPGAIPPKVLKTVINEG SYSEDQIAVEYFGGVLASSRTELSRDDRGARIAKALDILSCYQLRAHYLIYSSLSHLFKNKGQSLRMNEQRDKLEMFIPF DGFANAMGLTQKEWDNPQLLTHIFQGLNSDGLISDRWAFGPVDTLKTMSSSPLITLPGIVCTPTSSGAELFLWGFGSGNQ DLDYIFTNDFSAKVDGTPELIQGALATKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29464; Mature: 29333
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPITTVGLGAIAAYLGKDGIAKILGPTAEYLGGELQEFTKKRMNNVGQIFSNAEKKLG CCCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH DKVEQPGAIPPKVLKTVINEGSYSEDQIAVEYFGGVLASSRTELSRDDRGARIAKALDIL HHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH SCYQLRAHYLIYSSLSHLFKNKGQSLRMNEQRDKLEMFIPFDGFANAMGLTQKEWDNPQL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHHCCCCHHH LTHIFQGLNSDGLISDRWAFGPVDTLKTMSSSPLITLPGIVCTPTSSGAELFLWGFGSGN HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCEEECCCCCCCEEEEEECCCCC QDLDYIFTNDFSAKVDGTPELIQGALATKT CCCEEEEECCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure PEPITTVGLGAIAAYLGKDGIAKILGPTAEYLGGELQEFTKKRMNNVGQIFSNAEKKLG CCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH DKVEQPGAIPPKVLKTVINEGSYSEDQIAVEYFGGVLASSRTELSRDDRGARIAKALDIL HHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH SCYQLRAHYLIYSSLSHLFKNKGQSLRMNEQRDKLEMFIPFDGFANAMGLTQKEWDNPQL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHHCCCCHHH LTHIFQGLNSDGLISDRWAFGPVDTLKTMSSSPLITLPGIVCTPTSSGAELFLWGFGSGN HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCEEECCCCCCCEEEEEECCCCC QDLDYIFTNDFSAKVDGTPELIQGALATKT CCCEEEEECCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA