The gene/protein map for NC_003997 is currently unavailable.
Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is ybbK [H]

Identifier: 157961966

GI number: 157961966

Start: 2597670

End: 2598146

Strand: Direct

Name: ybbK [H]

Synonym: Spea_2145

Alternate gene names: 157961966

Gene position: 2597670-2598146 (Clockwise)

Preceding gene: 157961965

Following gene: 157961969

Centisome position: 50.2

GC content: 42.56

Gene sequence:

>477_bases
GTGGCGAAGGTATTAGTGAGTTCATGTTTGTTGGGTTGTAATGTTCGCTATAACGCGAGTCAGATTGAGGTTAATAGCGC
AGACTTTGATGACGTCGTTAAATCGCATAGCATCATCTCTTTTTGTCCAGAAGTTGCAGCCGGGTTAGTGATACCTAGAG
CTCCGGCTGAAATCTGTCAAGGTTCAGGTGTGGATGTATTAGCAGGCTCAGCCAAAATAATGTGCCAAGACCAAACCGAT
GTCACTGAGGCTTTTATATTGGGAGCAGAGCTGGCTTTGCAAGTCTGCATTAAGCAAGGGGTAACCCATGCTATTTTAAC
GGAGTCTAGTCCATCTTGTGGTAGCTCAAATATTTATAATGGTAAATTTGAAGGCGTTAAAATACCAGGACAAGGGGTCA
CTTGTGCTTTATTAGAAAAACACGGCATTAAGGTAACAAACCAGTATGAATTAGCAGAATTAACCAGCCACAGCTAA

Upstream 100 bases:

>100_bases
GTGACTAATCAACAGTGACTTAACCTTAAAAATCTAGATTGAAATCGTAACTAAGTTGGTGTTATACAAGCAAGTTAACG
AATTGAGGTAAGGATCTAAA

Downstream 100 bases:

>100_bases
TTGAAAGCAAAGAGTCGTGTTTAAGAGTCTACATTGTTCGCAATAATCGCGGATTATCCAGATGTGAATAATCCGCGCTG
GCATAGATTGCGGCCTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAKVLVSSCLLGCNVRYNASQIEVNSADFDDVVKSHSIISFCPEVAAGLVIPRAPAEICQGSGVDVLAGSAKIMCQDQTD
VTEAFILGAELALQVCIKQGVTHAILTESSPSCGSSNIYNGKFEGVKIPGQGVTCALLEKHGIKVTNQYELAELTSHS

Sequences:

>Translated_158_residues
MAKVLVSSCLLGCNVRYNASQIEVNSADFDDVVKSHSIISFCPEVAAGLVIPRAPAEICQGSGVDVLAGSAKIMCQDQTD
VTEAFILGAELALQVCIKQGVTHAILTESSPSCGSSNIYNGKFEGVKIPGQGVTCALLEKHGIKVTNQYELAELTSHS
>Mature_157_residues
AKVLVSSCLLGCNVRYNASQIEVNSADFDDVVKSHSIISFCPEVAAGLVIPRAPAEICQGSGVDVLAGSAKIMCQDQTDV
TEAFILGAELALQVCIKQGVTHAILTESSPSCGSSNIYNGKFEGVKIPGQGVTCALLEKHGIKVTNQYELAELTSHS

Specific function: Unknown

COG id: COG1683

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007553 [H]

Pfam domain/function: PF04463 DUF523 [H]

EC number: NA

Molecular weight: Translated: 16571; Mature: 16440

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVLVSSCLLGCNVRYNASQIEVNSADFDDVVKSHSIISFCPEVAAGLVIPRAPAEICQ
CHHHHHHHHHHCCCCEECCCEEEECCCCHHHHHHHCCHHHHHHHHHHCEECCCCCHHHHC
GSGVDVLAGSAKIMCQDQTDVTEAFILGAELALQVCIKQGVTHAILTESSPSCGSSNIYN
CCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
GKFEGVKIPGQGVTCALLEKHGIKVTNQYELAELTSHS
CEECCEEECCCCCEEEEECCCCCEEECCCHHHHHCCCC
>Mature Secondary Structure 
AKVLVSSCLLGCNVRYNASQIEVNSADFDDVVKSHSIISFCPEVAAGLVIPRAPAEICQ
HHHHHHHHHHCCCCEECCCEEEECCCCHHHHHHHCCHHHHHHHHHHCEECCCCCHHHHC
GSGVDVLAGSAKIMCQDQTDVTEAFILGAELALQVCIKQGVTHAILTESSPSCGSSNIYN
CCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
GKFEGVKIPGQGVTCALLEKHGIKVTNQYELAELTSHS
CEECCEEECCCCCEEEEECCCCCEEECCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]