| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961926
Identifier: 157961926
GI number: 157961926
Start: 2547769
End: 2548602
Strand: Reverse
Name: 157961926
Synonym: Spea_2105
Alternate gene names: NA
Gene position: 2548602-2547769 (Counterclockwise)
Preceding gene: 157961928
Following gene: 157961925
Centisome position: 49.25
GC content: 40.89
Gene sequence:
>834_bases ATGTTTACATCATTTTTCGGAATTACGGTTTTTTTGGGCCTGTTTGGCTGTGAACAACCGACAAATACTCAGGCTATTTG TAACAAAAATCCCGAACTTTGTGCCGATCTACATGACGATAGCTGGTGCCGATTTGAGCGAGGAGACCTGATCCGCAATA GGTTCAAGTTAAAAAGTATACAAATGCCCTCTGGTGAGCAAATTTATCAGCAACTGTTGTACCTAGAAGATTACAATAAA TGTGTCGAACTCGCGGCAGGCGTACAACACATTTTACATCCTGAGCGAACTAACGAACGCGCTCGAGCATTCGGCCTCAG TTCGCAAACTCTAGCCCAGCTACAAGAAACGACGCGTGGAAGCTTAGACCCTCACCTTGCCTACTATCATTGGTCTCGTT TTAATGACAATGAAGCCGAAGCCGTGTTATTTGCAGCAGAGAAAGCGAATAAGATAAATGACATCGACTTACAGGCTCAG TTAGCGTCTTATTATTTACGAATTGATCCACTTAAATCTAAACAGCTCTATGCACAAGTATTTCAAGGAAGTAACCAAGA TAACTTCCAACCAGATTGGTTATTAGCCCTTGCTAGTCTCTACCGTTTTGAAGAAAGAGGTGATATTGAATACTGGCTTT CAAAAGCTAATATCGAAATAACTGGAGCTAAATTCTCCTCAGAGCAGATGCTTGCACTTATAAAGGGCAATAAGAAGTTG CAACTTAAATTGGACCATGACGCGATTTTGCTAGCAGAACAACTCGAGGCTGGAAAGTATCAACAAAGTAAGCTAAAAAT ATTGCTGGATAAAGATTTAACTAAGTCGCTATAA
Upstream 100 bases:
>100_bases ATGAAAAGTCGGCTATCAGGCTAGCAAGATATTTTTTATAACACTGTAATTTTATTAGATAAATATAGCCTCGGAGCTAG TTTTGAATAGAAAATTTGTA
Downstream 100 bases:
>100_bases GATGTATGGGCTGTATACACAATTCGGCAATAATTTTGCCAACTTACAGCTAACCTGTAAATTGAGACGATTTATATGCA AATTCGCGACACATGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MFTSFFGITVFLGLFGCEQPTNTQAICNKNPELCADLHDDSWCRFERGDLIRNRFKLKSIQMPSGEQIYQQLLYLEDYNK CVELAAGVQHILHPERTNERARAFGLSSQTLAQLQETTRGSLDPHLAYYHWSRFNDNEAEAVLFAAEKANKINDIDLQAQ LASYYLRIDPLKSKQLYAQVFQGSNQDNFQPDWLLALASLYRFEERGDIEYWLSKANIEITGAKFSSEQMLALIKGNKKL QLKLDHDAILLAEQLEAGKYQQSKLKILLDKDLTKSL
Sequences:
>Translated_277_residues MFTSFFGITVFLGLFGCEQPTNTQAICNKNPELCADLHDDSWCRFERGDLIRNRFKLKSIQMPSGEQIYQQLLYLEDYNK CVELAAGVQHILHPERTNERARAFGLSSQTLAQLQETTRGSLDPHLAYYHWSRFNDNEAEAVLFAAEKANKINDIDLQAQ LASYYLRIDPLKSKQLYAQVFQGSNQDNFQPDWLLALASLYRFEERGDIEYWLSKANIEITGAKFSSEQMLALIKGNKKL QLKLDHDAILLAEQLEAGKYQQSKLKILLDKDLTKSL >Mature_277_residues MFTSFFGITVFLGLFGCEQPTNTQAICNKNPELCADLHDDSWCRFERGDLIRNRFKLKSIQMPSGEQIYQQLLYLEDYNK CVELAAGVQHILHPERTNERARAFGLSSQTLAQLQETTRGSLDPHLAYYHWSRFNDNEAEAVLFAAEKANKINDIDLQAQ LASYYLRIDPLKSKQLYAQVFQGSNQDNFQPDWLLALASLYRFEERGDIEYWLSKANIEITGAKFSSEQMLALIKGNKKL QLKLDHDAILLAEQLEAGKYQQSKLKILLDKDLTKSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31824; Mature: 31824
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTSFFGITVFLGLFGCEQPTNTQAICNKNPELCADLHDDSWCRFERGDLIRNRFKLKSI CCCHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHEEECCCCCCEEECCCHHHHHHHHHHEE QMPSGEQIYQQLLYLEDYNKCVELAAGVQHILHPERTNERARAFGLSSQTLAQLQETTRG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHCC SLDPHLAYYHWSRFNDNEAEAVLFAAEKANKINDIDLQAQLASYYLRIDPLKSKQLYAQV CCCCCEEEEEECCCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHH FQGSNQDNFQPDWLLALASLYRFEERGDIEYWLSKANIEITGAKFSSEQMLALIKGNKKL HCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHEEEEEECCCEE QLKLDHDAILLAEQLEAGKYQQSKLKILLDKDLTKSL EEEECCCCEEHHHHHHCCCCCCCCEEEEECCCHHHCC >Mature Secondary Structure MFTSFFGITVFLGLFGCEQPTNTQAICNKNPELCADLHDDSWCRFERGDLIRNRFKLKSI CCCHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHEEECCCCCCEEECCCHHHHHHHHHHEE QMPSGEQIYQQLLYLEDYNKCVELAAGVQHILHPERTNERARAFGLSSQTLAQLQETTRG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHCC SLDPHLAYYHWSRFNDNEAEAVLFAAEKANKINDIDLQAQLASYYLRIDPLKSKQLYAQV CCCCCEEEEEECCCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHH FQGSNQDNFQPDWLLALASLYRFEERGDIEYWLSKANIEITGAKFSSEQMLALIKGNKKL HCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHEEEEEECCCEE QLKLDHDAILLAEQLEAGKYQQSKLKILLDKDLTKSL EEEECCCCEEHHHHHHCCCCCCCCEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA