| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is cmk [H]
Identifier: 157961893
GI number: 157961893
Start: 2512366
End: 2513058
Strand: Direct
Name: cmk [H]
Synonym: Spea_2072
Alternate gene names: 157961893
Gene position: 2512366-2513058 (Clockwise)
Preceding gene: 157961892
Following gene: 157961894
Centisome position: 48.55
GC content: 44.59
Gene sequence:
>693_bases ATGTCAGAAAGGGCGCCTGTTGTCACTGTTGACGGCCCAAGCGGTGCGGGAAAAGGTACTATTAGTCAGTTACTTGCTGA GCGATTAGGCTACAAGTTACTCGATAGTGGTGCAATTTACCGTGTATTAGCGTTAGCTGCTATTCATCACAATGTAGAAC TAGATAATGAAGAAGCGTTAACATTACTTGCTGCACATTTGGACGTGCAGTTTGTTACGGGTAATGAAAGTAAAGGTATA AAAGTTGTATTAGAGGGCGAAGATGTATCTATTACGATACGTAGCCAAGAATGCTCTAATGCGGCATCTAAAGTAGCGGC ATTCCCACGTGTTAGGGAAGCGTTACTACGTCGTCAGCGTGCATTTGCCGAAGCACCTGGTTTGATTGCTGACGGTCGTG ATATGGGAACTATTGTATTTCCAACGACGCCAGCGAAATTATATTTAACTGCGTCGGCGGAAGAAAGAGCGCAAAGACGC TATAATCAGTTGCAGGACAAGGGCTTCGATGTTAATATCGATCAACTTTTGTCTGAGATAAAAGAGCGTGACGACCGCGA TATGAATCGTAGTGTCGCTCCTTTGGTGCCAGCCGAAGACGCACTTATTATCGATACGACGAACATTAATATTGAAGATG TGTTGGACTTAGCGCTAACCCATATTCATCAAAAGCTCCAAGTGCCGGCGTAA
Upstream 100 bases:
>100_bases ATTTGAAGTTTTTGCCGCTTTCTTAAGTTACATGGTTTATAATGCGCGCGCTCATTTTTCGGTTATATCAAGGAAGATGG AATTTCTTGTGGAGGATTTT
Downstream 100 bases:
>100_bases GCCGGTACTTAACCATTTGCCCCAAGGATGAGGCAAATTATTATACTGACTCCACGTCCAGGATGGTCCGTGGTTTATTA AAGAAAGTAACTTAAACATG
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSERAPVVTVDGPSGAGKGTISQLLAERLGYKLLDSGAIYRVLALAAIHHNVELDNEEALTLLAAHLDVQFVTGNESKGI KVVLEGEDVSITIRSQECSNAASKVAAFPRVREALLRRQRAFAEAPGLIADGRDMGTIVFPTTPAKLYLTASAEERAQRR YNQLQDKGFDVNIDQLLSEIKERDDRDMNRSVAPLVPAEDALIIDTTNINIEDVLDLALTHIHQKLQVPA
Sequences:
>Translated_230_residues MSERAPVVTVDGPSGAGKGTISQLLAERLGYKLLDSGAIYRVLALAAIHHNVELDNEEALTLLAAHLDVQFVTGNESKGI KVVLEGEDVSITIRSQECSNAASKVAAFPRVREALLRRQRAFAEAPGLIADGRDMGTIVFPTTPAKLYLTASAEERAQRR YNQLQDKGFDVNIDQLLSEIKERDDRDMNRSVAPLVPAEDALIIDTTNINIEDVLDLALTHIHQKLQVPA >Mature_229_residues SERAPVVTVDGPSGAGKGTISQLLAERLGYKLLDSGAIYRVLALAAIHHNVELDNEEALTLLAAHLDVQFVTGNESKGIK VVLEGEDVSITIRSQECSNAASKVAAFPRVREALLRRQRAFAEAPGLIADGRDMGTIVFPTTPAKLYLTASAEERAQRRY NQLQDKGFDVNIDQLLSEIKERDDRDMNRSVAPLVPAEDALIIDTTNINIEDVLDLALTHIHQKLQVPA
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787139, Length=226, Percent_Identity=66.3716814159292, Blast_Score=306, Evalue=6e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003136 - InterPro: IPR011994 [H]
Pfam domain/function: PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 25103; Mature: 24972
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERAPVVTVDGPSGAGKGTISQLLAERLGYKLLDSGAIYRVLALAAIHHNVELDNEEAL CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHCCCCCCHHHH TLLAAHLDVQFVTGNESKGIKVVLEGEDVSITIRSQECSNAASKVAAFPRVREALLRRQR HHEEEHHEEEEEECCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH AFAEAPGLIADGRDMGTIVFPTTPAKLYLTASAEERAQRRYNQLQDKGFDVNIDQLLSEI HHHHCCCCEECCCCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHH KERDDRDMNRSVAPLVPAEDALIIDTTNINIEDVLDLALTHIHQKLQVPA HHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SERAPVVTVDGPSGAGKGTISQLLAERLGYKLLDSGAIYRVLALAAIHHNVELDNEEAL CCCCCEEEEECCCCCCCHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHCCCCCCHHHH TLLAAHLDVQFVTGNESKGIKVVLEGEDVSITIRSQECSNAASKVAAFPRVREALLRRQR HHEEEHHEEEEEECCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH AFAEAPGLIADGRDMGTIVFPTTPAKLYLTASAEERAQRRYNQLQDKGFDVNIDQLLSEI HHHHCCCCEECCCCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHH KERDDRDMNRSVAPLVPAEDALIIDTTNINIEDVLDLALTHIHQKLQVPA HHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA