| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961843
Identifier: 157961843
GI number: 157961843
Start: 2447811
End: 2448866
Strand: Direct
Name: 157961843
Synonym: Spea_2022
Alternate gene names: NA
Gene position: 2447811-2448866 (Clockwise)
Preceding gene: 157961842
Following gene: 157961856
Centisome position: 47.3
GC content: 41.76
Gene sequence:
>1056_bases ATGACAATAAAATGGATACTCGAATATGGCGGGAGGAAAGCATCCTTTATCTCTTTAGTAAGAGCATGTTTGATGGTCGG TATATTGTCAGTTCTGTCTGCTTGTAGTTCTACGCCAGAAGAGACACTAACACCAGTAAAAGCGCCTGAGCGCCAAGATT TACTTGATGTTGGCGCTTTATCATCCGTAAGTGCGGACTTCTCTGCACCAGCTACTGAAGAAGAAGCGTTACTAAAAGCT CATAACGAAGAAAAGTCAGGCAATATTGAAAAAGCACTATATGCTTACATTCAAGCACTGGATTTCAACGCTAGAAATGC ACAAACCTTCTATCAAATAGGCCGTATACATACCATGAGGGGAAATCCTGAAATAGCTCTTAAGGCCTATAATGAAGCGC TCGCTATTGACCCTAATTTGATGATGGTTCATGCAGATCTTGGGGTTATTAGCATGGATAAGCGCCAATATAGAGACGCA CGTTTACACTTAGAAAAGGCAATTGAGTTAGATCAACAAAGGTTAGCAGAGCTGGAAGTACAGCAGGTCATGGGGTCTTT CTTAGTACCGAATAGAGAGTCACCGGCGAGAGTGTATAACGCCATTGCGATTCTGGAAGATGTAGAAAATAATCATCGAC AGGCTAGAGAATATTTCAAATTGATTCTAGAGCTTCAGCCTCACTCGGCGGTATTGATTACCAATCTTGGTTATTCTTAC TATTTAACGGGTGAATTAACCATGGCAGAAAAATATTTAAGGCAAGCTCTTAGAGAAGACTCTCGCTTTGACAGAGCTTG GACAAACTTAGGTCTTGTCTATGTCCGTAAAGGTATTTACAAGCGTGCGCTTTCCGCTTTTGAACAGACTATGTCTCCTG CTGATGCGTTAAATGATTTGGGTTACTTTTTGATGCTTGAGGGCAAGTATGAACGAGCGATTGCTTTATTTGAACGAGCA ATTGACATGTCTCCTAGTTATTTTGATCAGGCTCAGAAAAACTTAAGAAGGGCTAGGGCCGAGATCTCGGATGAGTTTCA GCATGCGGGCTATTGA
Upstream 100 bases:
>100_bases TTGGCCGTCATTTTTTATCGTTGCTGTAGGACCTGCGGTATTAAAAGTGATGAAAGTATGGGGTCAGGCTTTTTAGTAAA ATGATAAAAAGGAGATGATT
Downstream 100 bases:
>100_bases CTGGTTAGATTGCATACTTAACTATTAAATAGGTAAATAAATTGAGATATTAATATGCCCTACCCTTAAGAGTAGGGCTA ATCATTTCGAGCCAACTAAG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Peptidase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Repeat Protein; TPR Domain Containing Protein; TPR-Repeat-Containing Protein; Sulfotransferase; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Flp Pilus Assembly Protein TadD; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; O-Linked GlcNAc Transferase
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGALSSVSADFSAPATEEEALLKA HNEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMRGNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDA RLHLEKAIELDQQRLAELEVQQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSY YLTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDLGYFLMLEGKYERAIALFERA IDMSPSYFDQAQKNLRRARAEISDEFQHAGY
Sequences:
>Translated_351_residues MTIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGALSSVSADFSAPATEEEALLKA HNEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMRGNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDA RLHLEKAIELDQQRLAELEVQQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSY YLTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDLGYFLMLEGKYERAIALFERA IDMSPSYFDQAQKNLRRARAEISDEFQHAGY >Mature_350_residues TIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGALSSVSADFSAPATEEEALLKAH NEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMRGNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDAR LHLEKAIELDQQRLAELEVQQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSYY LTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDLGYFLMLEGKYERAIALFERAI DMSPSYFDQAQKNLRRARAEISDEFQHAGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307150, Length=255, Percent_Identity=26.2745098039216, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI32307148, Length=255, Percent_Identity=26.2745098039216, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39820; Mature: 39689
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGAL CCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHCCH SSVSADFSAPATEEEALLKAHNEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMR HHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEC GNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDARLHLEKAIELDQQRLAELEV CCCCEEEEECCCEEEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSY HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE YLTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDL EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GYFLMLEGKYERAIALFERAIDMSPSYFDQAQKNLRRARAEISDEFQHAGY CEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGAL CEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHCCH SSVSADFSAPATEEEALLKAHNEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMR HHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEC GNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDARLHLEKAIELDQQRLAELEV CCCCEEEEECCCEEEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSY HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE YLTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDL EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GYFLMLEGKYERAIALFERAIDMSPSYFDQAQKNLRRARAEISDEFQHAGY CEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA