| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is pcaD [H]
Identifier: 157961810
GI number: 157961810
Start: 2413711
End: 2414565
Strand: Reverse
Name: pcaD [H]
Synonym: Spea_1989
Alternate gene names: 157961810
Gene position: 2414565-2413711 (Counterclockwise)
Preceding gene: 157961811
Following gene: 157961809
Centisome position: 46.66
GC content: 43.74
Gene sequence:
>855_bases GTGAACATAACCGAAATAACAACGAATTTTGCAGCAACTCTTGCATCGAATAGAAAAGAGCTAATCATTGAAGGCAGCAC ACTCAGTTACCTAGACATTGGACAAGGTCCAGTCTTATTAATGGGTCATAGTTACCTCTGGGATAGTGAGATATGGGCGC CTCAGATCGAACACTTAAGCCAAAGTTACCGCTGTATTGTTCCAGAACTTTGGGGCCACGGTTTTTCCGGCTCATTACCC GCTAGCTGCCGTAACCTACGTGATATCGCCAATAATATGCTTGAGCTTATGGATGCACTGAACATAGAGAAATTCTCAGT AATTGGTCTATCAGTCGGCGCTATGTGGGGCGCAGAGCTTGCTCTTAAGGCACCAGAACGAGTGCAAAGCCTCGTCATGC TGGGAAGCTTTATCGGTTATGAGCCTGAGATCACCCGTGATAAATATTATGCCATGCTGGATGTGATAAAGGCAGAGCAA AGCGTCTCAGCTAAAATCATCGATACCATCACGCCACTCTTTTTTGCAACTCAGCCTAATCCAAACCTAGTTGAGCTATT CAAGAAAAAGCTCAATCATTTTGATAGCAGCAACGTCGACACCCTTTATCAAATGGGCAGAATGATTTTTGGTCGTCGAG ATACCATGGATGATGTCCATTTACTTACTCTTCCCTGCTTAATCATGACTGGGGTTGAAGACAAAGCGCGTACCGTACTC GAAGGATATCTAATGCACGACGCTATTGATGCGAGTCAATATGTGCATATTCCAGAATGTGGACACATATCGACATTAGA ACAAGCTGAGTTCGTCAATCAACAACTAGGTCAATTTTTAGCTGCACATCATTAA
Upstream 100 bases:
>100_bases CGCCCTCGTTAACGAATATGTTTTCCGAGTCGCTCCCATACCTGCGCCATAACGGCCACTCTACTACCAAATTTCTTCAC AAATATTTAGAGATAACACT
Downstream 100 bases:
>100_bases TTATTTAAAAATGAGCAAAGTTCGCTCCCACTCTGTGCTTAGTCTCATTTCGACATTTCTTAGTCAGCCTAAGCACAAAG ATTACTGCAGAGTTGACTCG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase I; Beta-ketoadipate enol-lactone hydrolase I; Enol-lactone hydrolase I [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNITEITTNFAATLASNRKELIIEGSTLSYLDIGQGPVLLMGHSYLWDSEIWAPQIEHLSQSYRCIVPELWGHGFSGSLP ASCRNLRDIANNMLELMDALNIEKFSVIGLSVGAMWGAELALKAPERVQSLVMLGSFIGYEPEITRDKYYAMLDVIKAEQ SVSAKIIDTITPLFFATQPNPNLVELFKKKLNHFDSSNVDTLYQMGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVL EGYLMHDAIDASQYVHIPECGHISTLEQAEFVNQQLGQFLAAHH
Sequences:
>Translated_284_residues MNITEITTNFAATLASNRKELIIEGSTLSYLDIGQGPVLLMGHSYLWDSEIWAPQIEHLSQSYRCIVPELWGHGFSGSLP ASCRNLRDIANNMLELMDALNIEKFSVIGLSVGAMWGAELALKAPERVQSLVMLGSFIGYEPEITRDKYYAMLDVIKAEQ SVSAKIIDTITPLFFATQPNPNLVELFKKKLNHFDSSNVDTLYQMGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVL EGYLMHDAIDASQYVHIPECGHISTLEQAEFVNQQLGQFLAAHH >Mature_284_residues MNITEITTNFAATLASNRKELIIEGSTLSYLDIGQGPVLLMGHSYLWDSEIWAPQIEHLSQSYRCIVPELWGHGFSGSLP ASCRNLRDIANNMLELMDALNIEKFSVIGLSVGAMWGAELALKAPERVQSLVMLGSFIGYEPEITRDKYYAMLDVIKAEQ SVSAKIIDTITPLFFATQPNPNLVELFKKKLNHFDSSNVDTLYQMGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVL EGYLMHDAIDASQYVHIPECGHISTLEQAEFVNQQLGQFLAAHH
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 31809; Mature: 31809
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITEITTNFAATLASNRKELIIEGSTLSYLDIGQGPVLLMGHSYLWDSEIWAPQIEHLS CCCHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEECCEECCCCCCCHHHHHHC QSYRCIVPELWGHGFSGSLPASCRNLRDIANNMLELMDALNIEKFSVIGLSVGAMWGAEL CHHEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCHHH ALKAPERVQSLVMLGSFIGYEPEITRDKYYAMLDVIKAEQSVSAKIIDTITPLFFATQPN HHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC PNLVELFKKKLNHFDSSNVDTLYQMGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH EGYLMHDAIDASQYVHIPECGHISTLEQAEFVNQQLGQFLAAHH HHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNITEITTNFAATLASNRKELIIEGSTLSYLDIGQGPVLLMGHSYLWDSEIWAPQIEHLS CCCHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEECCEECCCCCCCHHHHHHC QSYRCIVPELWGHGFSGSLPASCRNLRDIANNMLELMDALNIEKFSVIGLSVGAMWGAEL CHHEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCHHH ALKAPERVQSLVMLGSFIGYEPEITRDKYYAMLDVIKAEQSVSAKIIDTITPLFFATQPN HHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC PNLVELFKKKLNHFDSSNVDTLYQMGRMIFGRRDTMDDVHLLTLPCLIMTGVEDKARTVL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH EGYLMHDAIDASQYVHIPECGHISTLEQAEFVNQQLGQFLAAHH HHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8181753 [H]