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The map label for this gene is yebS [H]

Identifier: 157961753

GI number: 157961753

Start: 2342517

End: 2343158

Strand: Reverse

Name: yebS [H]

Synonym: Spea_1930

Alternate gene names: 157961753

Gene position: 2343158-2342517 (Counterclockwise)

Preceding gene: 157961754

Following gene: 157961752

Centisome position: 45.28

GC content: 42.83

Gene sequence:

>642_bases
ATGAACGATAATCAGCCCGCGACGTTAGGCCAAGATATCGGTCTCACATCTTGCACAACATGCCATAAAGTCACCTGTGC
AAAATCGACTCTTTGTAGTCGCTGTAATGCGCCTCTAACCGTCAGAGACTACTCAAGCGTACAAAAGAGCTGGGCTTTGC
TAATTACTGCAATGATTTTGCTGATACCCGCCAACGTTTATCCAATTTCGACACTAACAAACCAGGGAAGAGTCACTCAA
GATACTATCTTTTCTGGCATCGCCCACCTAGTCAAAACTGACATGATCCCCATCGCGATTATTCTGTTTGTTGCCAGTAT
TTTAGTCCCCATCCTTAAGATTGTGGGGTTAACAATTTATTTATCGGCCATTAGTTTTAAATTACCTATCTCTAAAAAGA
AGCTTATGACAGGCTTTCATATTATTGAATGGATAGGACGCTGGTCAATGCTTGACCTTTTCGTTATCTCACTAACCGTT
GCTGTCGTTAATATGGGCCAGTTATTAGACGCCAAACCAGCCCCTGCTGCCACAGCATTCGCCTTAGTTATTTTACTCAC
GCAGTTAGCTGCAAAAGTCATAGATACCCGTTTACTCTGGGATAGATTGGAAGCCAAAGATGACTCAAGTACAAACGCCT
AA

Upstream 100 bases:

>100_bases
GTCTCTTTTGGTTTCGGCACCTTCTGCTTTACTATGCTATTTATAATGACGCTATTTTTAATGCGTGAGTATGACTTAGA
ACACATGTGGAGCTTTCTAG

Downstream 100 bases:

>100_bases
AATCGTAAAGAAAAAACTATTTTCACCGATTTGGTTACTCCCCATTATCGCGCTTGCATTAGGCGCTTGGCTCGGTGTGA
AAAGCATACGAGAATCAGGC

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNDNQPATLGQDIGLTSCTTCHKVTCAKSTLCSRCNAPLTVRDYSSVQKSWALLITAMILLIPANVYPISTLTNQGRVTQ
DTIFSGIAHLVKTDMIPIAIILFVASILVPILKIVGLTIYLSAISFKLPISKKKLMTGFHIIEWIGRWSMLDLFVISLTV
AVVNMGQLLDAKPAPAATAFALVILLTQLAAKVIDTRLLWDRLEAKDDSSTNA

Sequences:

>Translated_213_residues
MNDNQPATLGQDIGLTSCTTCHKVTCAKSTLCSRCNAPLTVRDYSSVQKSWALLITAMILLIPANVYPISTLTNQGRVTQ
DTIFSGIAHLVKTDMIPIAIILFVASILVPILKIVGLTIYLSAISFKLPISKKKLMTGFHIIEWIGRWSMLDLFVISLTV
AVVNMGQLLDAKPAPAATAFALVILLTQLAAKVIDTRLLWDRLEAKDDSSTNA
>Mature_213_residues
MNDNQPATLGQDIGLTSCTTCHKVTCAKSTLCSRCNAPLTVRDYSSVQKSWALLITAMILLIPANVYPISTLTNQGRVTQ
DTIFSGIAHLVKTDMIPIAIILFVASILVPILKIVGLTIYLSAISFKLPISKKKLMTGFHIIEWIGRWSMLDLFVISLTV
AVVNMGQLLDAKPAPAATAFALVILLTQLAAKVIDTRLLWDRLEAKDDSSTNA

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=205, Percent_Identity=41.4634146341463, Blast_Score=150, Evalue=5e-38,
Organism=Escherichia coli, GI1787183, Length=207, Percent_Identity=34.7826086956522, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 23155; Mature: 23155

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDNQPATLGQDIGLTSCTTCHKVTCAKSTLCSRCNAPLTVRDYSSVQKSWALLITAMIL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
LIPANVYPISTLTNQGRVTQDTIFSGIAHLVKTDMIPIAIILFVASILVPILKIVGLTIY
HHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAISFKLPISKKKLMTGFHIIEWIGRWSMLDLFVISLTVAVVNMGQLLDAKPAPAATAF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALVILLTQLAAKVIDTRLLWDRLEAKDDSSTNA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNDNQPATLGQDIGLTSCTTCHKVTCAKSTLCSRCNAPLTVRDYSSVQKSWALLITAMIL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
LIPANVYPISTLTNQGRVTQDTIFSGIAHLVKTDMIPIAIILFVASILVPILKIVGLTIY
HHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAISFKLPISKKKLMTGFHIIEWIGRWSMLDLFVISLTVAVVNMGQLLDAKPAPAATAF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALVILLTQLAAKVIDTRLLWDRLEAKDDSSTNA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]