| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yebT [H]
Identifier: 157961752
GI number: 157961752
Start: 2339909
End: 2342539
Strand: Reverse
Name: yebT [H]
Synonym: Spea_1929
Alternate gene names: 157961752
Gene position: 2342539-2339909 (Counterclockwise)
Preceding gene: 157961753
Following gene: 157961750
Centisome position: 45.27
GC content: 43.98
Gene sequence:
>2631_bases ATGACTCAAGTACAAACGCCTAAAATCGTAAAGAAAAAACTATTTTCACCGATTTGGTTACTCCCCATTATCGCGCTTGC ATTAGGCGCTTGGCTCGGTGTGAAAAGCATACGAGAATCAGGCGTTGAGGTAACGATTCATTTCCCTAGCGCAACTGGAA TGGACATAGGTAAGACACTGGTAAAATATCAGGGACTTACTGTAGGTAAAGTCGTCGATATGAGTATCGATAAAGACCTA AAAGGCGTAGACGTCAGTGTCATCATGGACTACCGCGCTGCGCCATTTGTTAATGAGGGTACTAAGTTTTGGTTAGTTAA ACCTAAAGCCACCATCACTGGTGTTGAAGGATTAGATACCCTGTTCTCTGGTAATTATATTAGTATCTTACCCGGTGAAG GTGACTCAAGCTCTTTTTTTGAAGCCGAAACGACTGCTCCAGTCATCACTCCCGGTGTCGAAGGACTAATTGTTCACATC ACGACAAAGAAGTTAGGCTCATTAGATGTAGGCTCTCCGGTATTTTATCGACAAATCCCAGTTGGGCAGATAGTAGGCTA CCATCTTGAAAGTTCTGATCAGATTTTAGTAACAGCCTTTATTCAGCAGCAATATGCTCAGCTCGTAAAAGTTAACTCTC AATTTTGGAATGTATCTGGGATCAGTATCGATGCGTCTCTTTCAGGCATAAAAGTCAGCAGTGAGAGCCTTGCATCCATT CTTGCTGGCGGGATAAGTTTCAGCTCAGATGATGATTCAGAGTCTGCGAAAAATAAACACGAGTTCACTCTTTATGATAA TCAAGATGACGCTTTAGGCGGAGTTATGTTTACCCTCAAAGCGAGCGGTAATGAAGCGGTTTCTCAAAACGCTCCTATTG TCTATAGAGGGATCAAGATTGGACAGGTAATCCAAAAGACTCTCTCTGAAGACGGTATTACATTAGCAGCGAAAATCGAT GGGGTTTATCAAGAGCTACTCACCGAAACCGCCGATTTCTGGCTCGAGGGTGCCGATATTTCACTTTCAGGGATCAAGCA CCCAGAGCGTTTAATCACTGGTAGCGTGATTAACTTTATACCAGGTAATGGTGCCGCTAAGCAGGAATATACATTACTGA CCCAGGCTCCTGAGCCTAAAAATCTTAACAAACTATTACTAACATTACATTCAGATTCGAACCCTGGCGTGAGTGCAGGT GCTGAAATTCGTTATAAACAGATAAAGATTGGACAGGTATTGTCGAGTGAACTCAATTCAGCCCTAACCCAAGTTGAATA CCAGATAGAGATCGAGCCTGACTTCATTGGCTTAGTAAGCACAAATAGTCACTTCGTTGCAGAGTCTGCATTAGCAATAG ATGCAAGTCTGGAGGGGGTACAGGTCAAGACCCGGGACTTGAACACCTTAACCAGCGGAGCATTAAGCCTAGTAAGAGGC TCAAGTAAAGCGTTAGCGACGAGCGAAAGTGCATTACGCGTGTTTGCAACTAGCGATGAAGCCAAGAGTTATTACGCTAG CTACAACCTCATTAAGAAGCGCCTTCTAAGTCAAGATGGAGCCGATTTAGCCGCGGGTTCGCCCATCTATTATAAGAAGA TGCAAATCGGTCAGGTGACTGGCGTTCAGTGGCAAGCGTCTGACAATAACTTTGCCATCGACATGGCCATCGAGCGTACA TTTAACAGCTTATTGAATGATAAAACCGTATTTTGGCGAAATAGCGCAGTATCGATAAATGCCAGTTTATCCGGTGTCGA GGTTGAAGTTGCTCCGTTGAAAGCAGCCTTGAAAGGTGGAATAAGCCTAGGCCTTATCGAGGGCAAGCAGACTGCTGAAA ACAGTTATCTTTATGACTCTCGCTTCCTAGCCTTGAGTCAGGCTAAACCCATCAGTCTCACCTTCCCTGCTAGCGTTAAG TTAGCAACGAAAGCCCCCATTCGTTATCTCGGCCACAAGGTGGGTGAAGTAGATTCCGTCACCTTAACTCAAGATCTAAA ACAGTTAAACGTTAGTGCTTACCTGTATGGTGAGTATGCCGCTAATTTTAACCAGCAAGATGCAAGCTACTCGATAATCG ACGCAGATATCTCTTTAGCAGGCATTAAGGCGCCCGAGACTTTACTTACAGGTCCTTATATAGAAGTATTCCCAGGGCAA AGTGCAAAAAAGGCATCGAGCTTTGTCGGTCAAATCGAAAAGCCGTTCCATAATCTAGATAACGCTCTGACTTTTAAGTT GAGTAAGAGCAATTTAGGCTCTATCAAAGCCGGGACGGCCATTTTCTTTAGAGGTGTTAGAATTGGTCAAGTCGACAATT ATCAACTATCTCAACAAGGTACAGGCATTATTATGCACGCCCATGTGGAGGGTAAGTACAAACACTTGATTAACCAATCT AGCGTGTTTTGGGATCTATCTGGTGTGAAGGTTGACCTTGGACTATTTTCGGGTGCTCAAATTGAAACAGGTTCTTTAGA AACCATCTTAGCAGGTGGCATAGGTGTCGCCACTGAAGAGGTGACCTTACCAACAAATGCTATAATGAAACAGCATACAT TTGCGCTAAAACCAGAAGTTGACAGCAAGTGGCTTAGTTGGACACCAGTGCAAAAGGCCCAGCCTGATTAA
Upstream 100 bases:
>100_bases GCCCCTGCTGCCACAGCATTCGCCTTAGTTATTTTACTCACGCAGTTAGCTGCAAAAGTCATAGATACCCGTTTACTCTG GGATAGATTGGAAGCCAAAG
Downstream 100 bases:
>100_bases CGATATCGATAGTACATAGCCAGCAACGCGTGGTAATTCTATAAATGTAAAAACGAGGCTTTGGCCTCGTTTTTAATTCC CTCTACACTCTCGACTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 876; Mature: 875
Protein sequence:
>876_residues MTQVQTPKIVKKKLFSPIWLLPIIALALGAWLGVKSIRESGVEVTIHFPSATGMDIGKTLVKYQGLTVGKVVDMSIDKDL KGVDVSVIMDYRAAPFVNEGTKFWLVKPKATITGVEGLDTLFSGNYISILPGEGDSSSFFEAETTAPVITPGVEGLIVHI TTKKLGSLDVGSPVFYRQIPVGQIVGYHLESSDQILVTAFIQQQYAQLVKVNSQFWNVSGISIDASLSGIKVSSESLASI LAGGISFSSDDDSESAKNKHEFTLYDNQDDALGGVMFTLKASGNEAVSQNAPIVYRGIKIGQVIQKTLSEDGITLAAKID GVYQELLTETADFWLEGADISLSGIKHPERLITGSVINFIPGNGAAKQEYTLLTQAPEPKNLNKLLLTLHSDSNPGVSAG AEIRYKQIKIGQVLSSELNSALTQVEYQIEIEPDFIGLVSTNSHFVAESALAIDASLEGVQVKTRDLNTLTSGALSLVRG SSKALATSESALRVFATSDEAKSYYASYNLIKKRLLSQDGADLAAGSPIYYKKMQIGQVTGVQWQASDNNFAIDMAIERT FNSLLNDKTVFWRNSAVSINASLSGVEVEVAPLKAALKGGISLGLIEGKQTAENSYLYDSRFLALSQAKPISLTFPASVK LATKAPIRYLGHKVGEVDSVTLTQDLKQLNVSAYLYGEYAANFNQQDASYSIIDADISLAGIKAPETLLTGPYIEVFPGQ SAKKASSFVGQIEKPFHNLDNALTFKLSKSNLGSIKAGTAIFFRGVRIGQVDNYQLSQQGTGIIMHAHVEGKYKHLINQS SVFWDLSGVKVDLGLFSGAQIETGSLETILAGGIGVATEEVTLPTNAIMKQHTFALKPEVDSKWLSWTPVQKAQPD
Sequences:
>Translated_876_residues MTQVQTPKIVKKKLFSPIWLLPIIALALGAWLGVKSIRESGVEVTIHFPSATGMDIGKTLVKYQGLTVGKVVDMSIDKDL KGVDVSVIMDYRAAPFVNEGTKFWLVKPKATITGVEGLDTLFSGNYISILPGEGDSSSFFEAETTAPVITPGVEGLIVHI TTKKLGSLDVGSPVFYRQIPVGQIVGYHLESSDQILVTAFIQQQYAQLVKVNSQFWNVSGISIDASLSGIKVSSESLASI LAGGISFSSDDDSESAKNKHEFTLYDNQDDALGGVMFTLKASGNEAVSQNAPIVYRGIKIGQVIQKTLSEDGITLAAKID GVYQELLTETADFWLEGADISLSGIKHPERLITGSVINFIPGNGAAKQEYTLLTQAPEPKNLNKLLLTLHSDSNPGVSAG AEIRYKQIKIGQVLSSELNSALTQVEYQIEIEPDFIGLVSTNSHFVAESALAIDASLEGVQVKTRDLNTLTSGALSLVRG SSKALATSESALRVFATSDEAKSYYASYNLIKKRLLSQDGADLAAGSPIYYKKMQIGQVTGVQWQASDNNFAIDMAIERT FNSLLNDKTVFWRNSAVSINASLSGVEVEVAPLKAALKGGISLGLIEGKQTAENSYLYDSRFLALSQAKPISLTFPASVK LATKAPIRYLGHKVGEVDSVTLTQDLKQLNVSAYLYGEYAANFNQQDASYSIIDADISLAGIKAPETLLTGPYIEVFPGQ SAKKASSFVGQIEKPFHNLDNALTFKLSKSNLGSIKAGTAIFFRGVRIGQVDNYQLSQQGTGIIMHAHVEGKYKHLINQS SVFWDLSGVKVDLGLFSGAQIETGSLETILAGGIGVATEEVTLPTNAIMKQHTFALKPEVDSKWLSWTPVQKAQPD >Mature_875_residues TQVQTPKIVKKKLFSPIWLLPIIALALGAWLGVKSIRESGVEVTIHFPSATGMDIGKTLVKYQGLTVGKVVDMSIDKDLK GVDVSVIMDYRAAPFVNEGTKFWLVKPKATITGVEGLDTLFSGNYISILPGEGDSSSFFEAETTAPVITPGVEGLIVHIT TKKLGSLDVGSPVFYRQIPVGQIVGYHLESSDQILVTAFIQQQYAQLVKVNSQFWNVSGISIDASLSGIKVSSESLASIL AGGISFSSDDDSESAKNKHEFTLYDNQDDALGGVMFTLKASGNEAVSQNAPIVYRGIKIGQVIQKTLSEDGITLAAKIDG VYQELLTETADFWLEGADISLSGIKHPERLITGSVINFIPGNGAAKQEYTLLTQAPEPKNLNKLLLTLHSDSNPGVSAGA EIRYKQIKIGQVLSSELNSALTQVEYQIEIEPDFIGLVSTNSHFVAESALAIDASLEGVQVKTRDLNTLTSGALSLVRGS SKALATSESALRVFATSDEAKSYYASYNLIKKRLLSQDGADLAAGSPIYYKKMQIGQVTGVQWQASDNNFAIDMAIERTF NSLLNDKTVFWRNSAVSINASLSGVEVEVAPLKAALKGGISLGLIEGKQTAENSYLYDSRFLALSQAKPISLTFPASVKL ATKAPIRYLGHKVGEVDSVTLTQDLKQLNVSAYLYGEYAANFNQQDASYSIIDADISLAGIKAPETLLTGPYIEVFPGQS AKKASSFVGQIEKPFHNLDNALTFKLSKSNLGSIKAGTAIFFRGVRIGQVDNYQLSQQGTGIIMHAHVEGKYKHLINQSS VFWDLSGVKVDLGLFSGAQIETGSLETILAGGIGVATEEVTLPTNAIMKQHTFALKPEVDSKWLSWTPVQKAQPD
Specific function: Unknown
COG id: COG3008
COG function: function code R; Paraquat-inducible protein B
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqiB family [H]
Homologues:
Organism=Escherichia coli, GI87081984, Length=872, Percent_Identity=31.4220183486239, Blast_Score=427, Evalue=1e-120, Organism=Escherichia coli, GI1787184, Length=309, Percent_Identity=32.0388349514563, Blast_Score=158, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 94279; Mature: 94148
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVQTPKIVKKKLFSPIWLLPIIALALGAWLGVKSIRESGVEVTIHFPSATGMDIGKTL CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH VKYQGLTVGKVVDMSIDKDLKGVDVSVIMDYRAAPFVNEGTKFWLVKPKATITGVEGLDT HHHCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEECCCCHHH LFSGNYISILPGEGDSSSFFEAETTAPVITPGVEGLIVHITTKKLGSLDVGSPVFYRQIP HHCCCEEEEECCCCCCCCEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCEEEEECC VGQIVGYHLESSDQILVTAFIQQQYAQLVKVNSQFWNVSGISIDASLSGIKVSSESLASI HHHEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCEEEEECEEEECCCCCEEECHHHHHHH LAGGISFSSDDDSESAKNKHEFTLYDNQDDALGGVMFTLKASGNEAVSQNAPIVYRGIKI HHCCCCCCCCCCCHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCHH GQVIQKTLSEDGITLAAKIDGVYQELLTETADFWLEGADISLSGIKHPERLITGSVINFI HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHEEECCCEEECCCCCCHHHHCCCCEEEC PGNGAAKQEYTLLTQAPEPKNLNKLLLTLHSDSNPGVSAGAEIRYKQIKIGQVLSSELNS CCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHH ALTQVEYQIEIEPDFIGLVSTNSHFVAESALAIDASLEGVQVKTRDLNTLTSGALSLVRG HHHEEEEEEEECCCEEEEEECCCCEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCC SSKALATSESALRVFATSDEAKSYYASYNLIKKRLLSQDGADLAAGSPIYYKKMQIGQVT CCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECEEE GVQWQASDNNFAIDMAIERTFNSLLNDKTVFWRNSAVSINASLSGVEVEVAPLKAALKGG CEEEEECCCCEEEEEEHHHHHHHHHCCCEEEEECCEEEEECCCCCEEEEEHHHHHHHHCC ISLGLIEGKQTAENSYLYDSRFLALSQAKPISLTFPASVKLATKAPIRYLGHKVGEVDSV CEEEEECCCCCCCCCEEECCEEEEECCCCCEEEECCCCEEEECCCCHHHHHHHCCCCCEE TLTQDLKQLNVSAYLYGEYAANFNQQDASYSIIDADISLAGIKAPETLLTGPYIEVFPGQ HHHHHHHHCCEEEEEEEEHHCCCCCCCCCEEEEECCEEEEECCCCHHHHCCCEEEECCCC SAKKASSFVGQIEKPFHNLDNALTFKLSKSNLGSIKAGTAIFFRGVRIGQVDNYQLSQQG CHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECEEECCCCCEEECCCC TGIIMHAHVEGKYKHLINQSSVFWDLSGVKVDLGLFSGAQIETGSLETILAGGIGVATEE CEEEEEEEECCHHHHHCCCCCEEEEECCCEEEEEECCCCEEECCCCEEEEECCCCEEECE VTLPTNAIMKQHTFALKPEVDSKWLSWTPVQKAQPD EECCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQVQTPKIVKKKLFSPIWLLPIIALALGAWLGVKSIRESGVEVTIHFPSATGMDIGKTL CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH VKYQGLTVGKVVDMSIDKDLKGVDVSVIMDYRAAPFVNEGTKFWLVKPKATITGVEGLDT HHHCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEECCCCHHH LFSGNYISILPGEGDSSSFFEAETTAPVITPGVEGLIVHITTKKLGSLDVGSPVFYRQIP HHCCCEEEEECCCCCCCCEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCEEEEECC VGQIVGYHLESSDQILVTAFIQQQYAQLVKVNSQFWNVSGISIDASLSGIKVSSESLASI HHHEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCEEEEECEEEECCCCCEEECHHHHHHH LAGGISFSSDDDSESAKNKHEFTLYDNQDDALGGVMFTLKASGNEAVSQNAPIVYRGIKI HHCCCCCCCCCCCHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCHH GQVIQKTLSEDGITLAAKIDGVYQELLTETADFWLEGADISLSGIKHPERLITGSVINFI HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHEEECCCEEECCCCCCHHHHCCCCEEEC PGNGAAKQEYTLLTQAPEPKNLNKLLLTLHSDSNPGVSAGAEIRYKQIKIGQVLSSELNS CCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHH ALTQVEYQIEIEPDFIGLVSTNSHFVAESALAIDASLEGVQVKTRDLNTLTSGALSLVRG HHHEEEEEEEECCCEEEEEECCCCEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCC SSKALATSESALRVFATSDEAKSYYASYNLIKKRLLSQDGADLAAGSPIYYKKMQIGQVT CCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECEEE GVQWQASDNNFAIDMAIERTFNSLLNDKTVFWRNSAVSINASLSGVEVEVAPLKAALKGG CEEEEECCCCEEEEEEHHHHHHHHHCCCEEEEECCEEEEECCCCCEEEEEHHHHHHHHCC ISLGLIEGKQTAENSYLYDSRFLALSQAKPISLTFPASVKLATKAPIRYLGHKVGEVDSV CEEEEECCCCCCCCCEEECCEEEEECCCCCEEEECCCCEEEECCCCHHHHHHHCCCCCEE TLTQDLKQLNVSAYLYGEYAANFNQQDASYSIIDADISLAGIKAPETLLTGPYIEVFPGQ HHHHHHHHCCEEEEEEEEHHCCCCCCCCCEEEEECCEEEEECCCCHHHHCCCEEEECCCC SAKKASSFVGQIEKPFHNLDNALTFKLSKSNLGSIKAGTAIFFRGVRIGQVDNYQLSQQG CHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECEEECCCCCEEECCCC TGIIMHAHVEGKYKHLINQSSVFWDLSGVKVDLGLFSGAQIETGSLETILAGGIGVATEE CEEEEEEEECCHHHHHCCCCCEEEEECCCEEEEEECCCCEEECCCCEEEEECCCCEEECE VTLPTNAIMKQHTFALKPEVDSKWLSWTPVQKAQPD EECCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]