| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fur [H]
Identifier: 157961620
GI number: 157961620
Start: 2193048
End: 2193479
Strand: Reverse
Name: fur [H]
Synonym: Spea_1796
Alternate gene names: 157961620
Gene position: 2193479-2193048 (Counterclockwise)
Preceding gene: 157961623
Following gene: 157961618
Centisome position: 42.39
GC content: 42.13
Gene sequence:
>432_bases ATGACAGATGGAAATCAAGCACTAAAGAAAGCGGGTTTGAAAGTGACCTTACCACGAGTCAAAATTTTAGAATTGATGCA AGCGCCGGAAAATCAACACATCAGTGCTGAGGATCTCTATAAGAAATTACTCGACTTGGGGGAAGAGATAGGTCTTGCTA CTGTATATCGTGTTCTTAACCAATTCGATGATGCGGGCATTGTGACTCGTCATCACTTCGAAAGCGGAAAAGCCGTTTTC GAACTTGCATCACAGCATCACCACGATCACTTAGTTTGTTTGTCATGTGGCAAAGTCATCGAATTCTCAGATGAAATGAT TGAACGCCGTCAAGATGAAATCGCGATGAAGCACAACATTAAACTGACAAACCACAGTTTATACCTTTATGGTGTTTGCA CTAACGATGAGTGTGACCACGGCGTAGCTTAA
Upstream 100 bases:
>100_bases AAAGGTTTAAGTTTTCAACTGGTACACATATAATGGATTGAATACCCACAAATGAACGGATTAACTTATAGCTAATCGTT CTGCAATCAAGAGACCAATA
Downstream 100 bases:
>100_bases CTGCAGCGTCCGCCATAAAAGACCAGCTAAGGCTGGTTTTTTTGTATCTATTTATTAGCCTTTATCTGGCTAAAGCACTT TATGGAATACATTCACTTTA
Product: ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTDGNQALKKAGLKVTLPRVKILELMQAPENQHISAEDLYKKLLDLGEEIGLATVYRVLNQFDDAGIVTRHHFESGKAVF ELASQHHHDHLVCLSCGKVIEFSDEMIERRQDEIAMKHNIKLTNHSLYLYGVCTNDECDHGVA
Sequences:
>Translated_143_residues MTDGNQALKKAGLKVTLPRVKILELMQAPENQHISAEDLYKKLLDLGEEIGLATVYRVLNQFDDAGIVTRHHFESGKAVF ELASQHHHDHLVCLSCGKVIEFSDEMIERRQDEIAMKHNIKLTNHSLYLYGVCTNDECDHGVA >Mature_142_residues TDGNQALKKAGLKVTLPRVKILELMQAPENQHISAEDLYKKLLDLGEEIGLATVYRVLNQFDDAGIVTRHHFESGKAVFE LASQHHHDHLVCLSCGKVIEFSDEMIERRQDEIAMKHNIKLTNHSLYLYGVCTNDECDHGVA
Specific function: Fur acts as a repressor, employing Fe(2+) as a cofactor to bind the operator of the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=138, Percent_Identity=77.536231884058, Blast_Score=229, Evalue=5e-62,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16153; Mature: 16021
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGNQALKKAGLKVTLPRVKILELMQAPENQHISAEDLYKKLLDLGEEIGLATVYRVLN CCCHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHH QFDDAGIVTRHHFESGKAVFELASQHHHDHLVCLSCGKVIEFSDEMIERRQDEIAMKHNI HCCCCCCEEEHHCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCE KLTNHSLYLYGVCTNDECDHGVA EEECCEEEEEEEECCCCCCCCCC >Mature Secondary Structure TDGNQALKKAGLKVTLPRVKILELMQAPENQHISAEDLYKKLLDLGEEIGLATVYRVLN CCHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHH QFDDAGIVTRHHFESGKAVFELASQHHHDHLVCLSCGKVIEFSDEMIERRQDEIAMKHNI HCCCCCCEEEHHCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCE KLTNHSLYLYGVCTNDECDHGVA EEECCEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1372314 [H]