Click here to switch to the map view.

The map label for this gene is 157961563

Identifier: 157961563

GI number: 157961563

Start: 2114598

End: 2115584

Strand: Direct

Name: 157961563

Synonym: Spea_1739

Alternate gene names: NA

Gene position: 2114598-2115584 (Clockwise)

Preceding gene: 157961562

Following gene: 157961564

Centisome position: 40.87

GC content: 49.44

Gene sequence:

>987_bases
ATGTTAACGCTAACTTATCCTTGGCTCGCTATCTTGATCCTACTGCCTCTATTGGCCGTTTTACTTCCTAAGCACCGTAC
CGCTTTACCTGCTATACGCTTCTCAAAATTTAAACTGTTGGTGAGCTTAAGTCAGCGCAGGCCAAGTGAAGGGGCTGTGG
TGCTTCGCCGACTGTTTTGGCAGCGCCTATTGGCGACGCTGACCTACCTTGCATTAGTCTGCGCCGCTGTGCGTCCGGTT
TGGCTTGGGGAGCCGATTCAAATAGAGCAGGTTGGACGGGAGATGATGATTGCTGTCGATCTGTCAGGCTCAATGGAGGC
GAGGGATTTTGTCGATCCCCAAGGCGAAATACTGCGCCGGGTCGATGGAGTTAAAGCGTTACTGCAATCATTTCTACTCA
AGCGAGACTCAGATCGTATCGGCTTAATCGCTTTTGGTGAGAATGCTTATCTGCAGGCTCCATTTACGCAAGATAAACAG
ATATTAAGCCAATTACTGCAGCAGATGGACGTGCGTATGGCGGGGGCTGGCACGGCAATTGGTGATGCGATAGGTGTTGC
GGTTAATCACTTTGAGCAGTCAGAGGTTGAAAACAAGGTGTTACTGCTGCTCACCGATGGCAATGACACTAGTAGTGAGT
TTCCACCACTGGATGCGGCCCATTACGCTGGGGAGCAGGGTGTCGTTATCTATCCCATCGCGATTGGAGACCCCAAAAAT
GTGGGAGAGGATAGCCTTGATATCGCAACACTAGAGCGCATTGCCGATTTAACGCAGGGAAGAGTATTTGAGGCCGATGA
CGGTCAATCTCTTATTGAGGTTTATAAGGTGTTAGAGCAGCTGCAGCCGCAACTGTTTGACAGCTACACAATTCGTCCTG
AAAAAGATCTCTACTTCTGGCCGATCTTATTCATGTTGTGCATTAACCTGTCGATGTTGATGCTGGTTAGCTTTCGAAGA
AAGCCGCAGGGGACCAAGTATGAGTGA

Upstream 100 bases:

>100_bases
CTGAAGCGATGGCAGCGCTGCTAGTTTGTAACTATCAAGCTAAGGCGAGCCTAACCGATGAATATCGCCTCGCGCTTACG
TGCTGGGTTAAGGAGCATGT

Downstream 100 bases:

>100_bases
GTTTCATTTTATCAGACCATGGGCACTGCTTGCGCTTGCGCCTTATCTATATTGGCTATGGGGAAATTACCGTACTCAGC
AGAAACTTGACGCTAAGTTA

Product: von Willebrand factor type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MLTLTYPWLAILILLPLLAVLLPKHRTALPAIRFSKFKLLVSLSQRRPSEGAVVLRRLFWQRLLATLTYLALVCAAVRPV
WLGEPIQIEQVGREMMIAVDLSGSMEARDFVDPQGEILRRVDGVKALLQSFLLKRDSDRIGLIAFGENAYLQAPFTQDKQ
ILSQLLQQMDVRMAGAGTAIGDAIGVAVNHFEQSEVENKVLLLLTDGNDTSSEFPPLDAAHYAGEQGVVIYPIAIGDPKN
VGEDSLDIATLERIADLTQGRVFEADDGQSLIEVYKVLEQLQPQLFDSYTIRPEKDLYFWPILFMLCINLSMLMLVSFRR
KPQGTKYE

Sequences:

>Translated_328_residues
MLTLTYPWLAILILLPLLAVLLPKHRTALPAIRFSKFKLLVSLSQRRPSEGAVVLRRLFWQRLLATLTYLALVCAAVRPV
WLGEPIQIEQVGREMMIAVDLSGSMEARDFVDPQGEILRRVDGVKALLQSFLLKRDSDRIGLIAFGENAYLQAPFTQDKQ
ILSQLLQQMDVRMAGAGTAIGDAIGVAVNHFEQSEVENKVLLLLTDGNDTSSEFPPLDAAHYAGEQGVVIYPIAIGDPKN
VGEDSLDIATLERIADLTQGRVFEADDGQSLIEVYKVLEQLQPQLFDSYTIRPEKDLYFWPILFMLCINLSMLMLVSFRR
KPQGTKYE
>Mature_328_residues
MLTLTYPWLAILILLPLLAVLLPKHRTALPAIRFSKFKLLVSLSQRRPSEGAVVLRRLFWQRLLATLTYLALVCAAVRPV
WLGEPIQIEQVGREMMIAVDLSGSMEARDFVDPQGEILRRVDGVKALLQSFLLKRDSDRIGLIAFGENAYLQAPFTQDKQ
ILSQLLQQMDVRMAGAGTAIGDAIGVAVNHFEQSEVENKVLLLLTDGNDTSSEFPPLDAAHYAGEQGVVIYPIAIGDPKN
VGEDSLDIATLERIADLTQGRVFEADDGQSLIEVYKVLEQLQPQLFDSYTIRPEKDLYFWPILFMLCINLSMLMLVSFRR
KPQGTKYE

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 36787; Mature: 36787

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLTYPWLAILILLPLLAVLLPKHRTALPAIRFSKFKLLVSLSQRRPSEGAVVLRRLFW
CEEEEHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QRLLATLTYLALVCAAVRPVWLGEPIQIEQVGREMMIAVDLSGSMEARDFVDPQGEILRR
HHHHHHHHHHHHHHHHHCCHHCCCCEEHHHCCCEEEEEEECCCCCCHHHCCCCHHHHHHH
VDGVKALLQSFLLKRDSDRIGLIAFGENAYLQAPFTQDKQILSQLLQQMDVRMAGAGTAI
HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHH
GDAIGVAVNHFEQSEVENKVLLLLTDGNDTSSEFPPLDAAHYAGEQGVVIYPIAIGDPKN
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCC
VGEDSLDIATLERIADLTQGRVFEADDGQSLIEVYKVLEQLQPQLFDSYTIRPEKDLYFW
CCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHH
PILFMLCINLSMLMLVSFRRKPQGTKYE
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLTLTYPWLAILILLPLLAVLLPKHRTALPAIRFSKFKLLVSLSQRRPSEGAVVLRRLFW
CEEEEHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QRLLATLTYLALVCAAVRPVWLGEPIQIEQVGREMMIAVDLSGSMEARDFVDPQGEILRR
HHHHHHHHHHHHHHHHHCCHHCCCCEEHHHCCCEEEEEEECCCCCCHHHCCCCHHHHHHH
VDGVKALLQSFLLKRDSDRIGLIAFGENAYLQAPFTQDKQILSQLLQQMDVRMAGAGTAI
HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHH
GDAIGVAVNHFEQSEVENKVLLLLTDGNDTSSEFPPLDAAHYAGEQGVVIYPIAIGDPKN
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCC
VGEDSLDIATLERIADLTQGRVFEADDGQSLIEVYKVLEQLQPQLFDSYTIRPEKDLYFW
CCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHH
PILFMLCINLSMLMLVSFRRKPQGTKYE
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]