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The map label for this gene is yfcH [H]

Identifier: 157961488

GI number: 157961488

Start: 2015581

End: 2016486

Strand: Reverse

Name: yfcH [H]

Synonym: Spea_1663

Alternate gene names: 157961488

Gene position: 2016486-2015581 (Counterclockwise)

Preceding gene: 157961489

Following gene: 157961485

Centisome position: 38.97

GC content: 47.57

Gene sequence:

>906_bases
ATGAATATATTAATGACTGGCGCCAGTGGATTTATCGGTACACAACTGGTCAGCGCCCTAGCACCTCTACATCAATTAAC
CATTCTCAGCCGTGATCCGTTGCATGCGTCCATTAAACTGGGCGCTAAGCATCGTTATTTAAATTCATTGGATGAACTCA
ACGACTTAGATACCTTCGATTCGGTTATTAATTTGGCCGGAGAGCCCATCGCCTCAAAACGCTGGACCGGAAAGCAACGG
CTTGCTATCTGCGAAAGTCGTTGGTCGATCACCGAGCAACTCTCTTCACTGATCCTAAAAAGCGCCACACCACCTCATAC
CCTGATAAGCGCCTCTGCCGTAGGTTATTATGGTAATCAAGAGCAAAACAGTGTCGATGAGAGCTATCAGCCCAGTCGTA
CTAATAGATCTGAATTTACCCATCAAGTTTGTCATCGCTGGGAAGATGGCGCACTAAAGGCAAAGAGTGAGCAGACCCGA
GTATGTATTATTCGTATTGGACTGGTACTTGGCACTCATGGTGGCGCTTTGGCTAAGATGCTCCCGGCATTTAAATTAGG
TCTTGGCGGCCCAATTGCCGATGGGATGCAAGGCATGAGTTGGATCCATCAAACCGATCTGGTTAACCTGTTCATCCACC
TACTCAATCACCCTGATTGTGAGGGCGTATATAACGGCTGCGCCCCCAATCCAATTAGCAACAGTCTGTTTACCCAAGCC
CTTGGCCAGGCACTCAATCGACCGGCTTTTATTCCGGTGCCGGCATTTGCCTTAAAACTCATTCTAGGTGAGATGTCGAG
CCTATTAATTGAAGGGCAATATGTCTTGCCTAAACGCACCTTGGCATCGGGATTCGAGTTTAAGTACCCAGAGCTTGAGG
CCGCATTCAAACAGTTATTCAGTTAA

Upstream 100 bases:

>100_bases
GTCTCACTAGAGCTGTGCTATCAAAAAGCACCGCTTTAACAGTCACAATCTAGCGTGCTGACAGCAAGACCTTTAACTTA
CATTGTATCTATTTGAGCCT

Downstream 100 bases:

>100_bases
TATTACCCTGCTAAATAAACGGCTGACAGATTAAAAATCAAAAAGGGATAGCTAAGCTATCCCTTTTTGATGACAAGTTA
ACATTATATTAGTGCGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNILMTGASGFIGTQLVSALAPLHQLTILSRDPLHASIKLGAKHRYLNSLDELNDLDTFDSVINLAGEPIASKRWTGKQR
LAICESRWSITEQLSSLILKSATPPHTLISASAVGYYGNQEQNSVDESYQPSRTNRSEFTHQVCHRWEDGALKAKSEQTR
VCIIRIGLVLGTHGGALAKMLPAFKLGLGGPIADGMQGMSWIHQTDLVNLFIHLLNHPDCEGVYNGCAPNPISNSLFTQA
LGQALNRPAFIPVPAFALKLILGEMSSLLIEGQYVLPKRTLASGFEFKYPELEAAFKQLFS

Sequences:

>Translated_301_residues
MNILMTGASGFIGTQLVSALAPLHQLTILSRDPLHASIKLGAKHRYLNSLDELNDLDTFDSVINLAGEPIASKRWTGKQR
LAICESRWSITEQLSSLILKSATPPHTLISASAVGYYGNQEQNSVDESYQPSRTNRSEFTHQVCHRWEDGALKAKSEQTR
VCIIRIGLVLGTHGGALAKMLPAFKLGLGGPIADGMQGMSWIHQTDLVNLFIHLLNHPDCEGVYNGCAPNPISNSLFTQA
LGQALNRPAFIPVPAFALKLILGEMSSLLIEGQYVLPKRTLASGFEFKYPELEAAFKQLFS
>Mature_301_residues
MNILMTGASGFIGTQLVSALAPLHQLTILSRDPLHASIKLGAKHRYLNSLDELNDLDTFDSVINLAGEPIASKRWTGKQR
LAICESRWSITEQLSSLILKSATPPHTLISASAVGYYGNQEQNSVDESYQPSRTNRSEFTHQVCHRWEDGALKAKSEQTR
VCIIRIGLVLGTHGGALAKMLPAFKLGLGGPIADGMQGMSWIHQTDLVNLFIHLLNHPDCEGVYNGCAPNPISNSLFTQA
LGQALNRPAFIPVPAFALKLILGEMSSLLIEGQYVLPKRTLASGFEFKYPELEAAFKQLFS

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=308, Percent_Identity=37.3376623376623, Blast_Score=191, Evalue=6e-49,
Organism=Escherichia coli, GI1788642, Length=301, Percent_Identity=47.1760797342193, Blast_Score=281, Evalue=4e-77,
Organism=Drosophila melanogaster, GI28573846, Length=300, Percent_Identity=31.6666666666667, Blast_Score=150, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32924; Mature: 32924

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILMTGASGFIGTQLVSALAPLHQLTILSRDPLHASIKLGAKHRYLNSLDELNDLDTFD
CCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
SVINLAGEPIASKRWTGKQRLAICESRWSITEQLSSLILKSATPPHTLISASAVGYYGNQ
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
EQNSVDESYQPSRTNRSEFTHQVCHRWEDGALKAKSEQTRVCIIRIGLVLGTHGGALAKM
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHCCCCHHHHHH
LPAFKLGLGGPIADGMQGMSWIHQTDLVNLFIHLLNHPDCEGVYNGCAPNPISNSLFTQA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
LGQALNRPAFIPVPAFALKLILGEMSSLLIEGQYVLPKRTLASGFEFKYPELEAAFKQLF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCCCHHHHHHHHHC
S
C
>Mature Secondary Structure
MNILMTGASGFIGTQLVSALAPLHQLTILSRDPLHASIKLGAKHRYLNSLDELNDLDTFD
CCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
SVINLAGEPIASKRWTGKQRLAICESRWSITEQLSSLILKSATPPHTLISASAVGYYGNQ
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
EQNSVDESYQPSRTNRSEFTHQVCHRWEDGALKAKSEQTRVCIIRIGLVLGTHGGALAKM
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHCCCCHHHHHH
LPAFKLGLGGPIADGMQGMSWIHQTDLVNLFIHLLNHPDCEGVYNGCAPNPISNSLFTQA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
LGQALNRPAFIPVPAFALKLILGEMSSLLIEGQYVLPKRTLASGFEFKYPELEAAFKQLF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCCCHHHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]