Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961370

Identifier: 157961370

GI number: 157961370

Start: 1880594

End: 1881178

Strand: Reverse

Name: 157961370

Synonym: Spea_1544

Alternate gene names: NA

Gene position: 1881178-1880594 (Counterclockwise)

Preceding gene: 157961374

Following gene: 157961369

Centisome position: 36.35

GC content: 46.84

Gene sequence:

>585_bases
TTGTTAACTGACTCTAGCGCCTATTTTAGTATTAATCACCCATTTGATGTCTATTTGTGTCCTTGGGACGAAGCCAAGCC
GCTGCCATCAGCTGAGCAGTTGAGCTTTATGTTTCCGACTAGCTTACAGCTGATTAGTGACGTGAAGGCTCTCGAATCAG
ACTGTCTATTACAGCTGCGTCATCTCGATGACGATGCAAAAACCGTCGTGGAATTTTTAAAGCTGCAATCGCGTAAAATC
GACATGGTGCTACAACACATCATGGCGAAAGAGGAATACCAAGGCACCCATTACATCGGCAAGCAATTTGGTGGCAGCGG
CATCACGCTGATTAGCCCATCGCCTTTAGTACTCGGGCAAGAGTACCAGGTGACGCTACACATCAAAGAAGAGCTAGTCG
CCCTGCTCTGCTTAGCTAAAGTCAATGGCTGCTCACCGATCGAAAACGCTGATGATCCTAACACGGCGCAATATGCAGTG
GAGCTAAGCTTTAGTGTGATCCAAGATAGCGACGTTGAACAGTTGGTTAAAGCCAGCCTAAGTTTGCAGCAAAAACAACT
CAAGCTACGACAGTTATCACGCTAA

Upstream 100 bases:

>100_bases
CGCTTAAACAGTCAGACATTTGAATGTCTAACCTTGCTAAATCATAAAGATGCGCACGATAATAGGGGTATTAGCCCCCT
AAAAACAAGAGGCAACCCCA

Downstream 100 bases:

>100_bases
CCTAAAAAGAATTTTCACTGGCATGCGCTGAGACAAGCCTCTACAATACTTAGCAAGTTTACTGCTATCTGGACTTGTTT
CCTCGCCTTAATGAATTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLRHLDDDAKTVVEFLKLQSRKI
DMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQEYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAV
ELSFSVIQDSDVEQLVKASLSLQQKQLKLRQLSR

Sequences:

>Translated_194_residues
MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLRHLDDDAKTVVEFLKLQSRKI
DMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQEYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAV
ELSFSVIQDSDVEQLVKASLSLQQKQLKLRQLSR
>Mature_194_residues
MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLRHLDDDAKTVVEFLKLQSRKI
DMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQEYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAV
ELSFSVIQDSDVEQLVKASLSLQQKQLKLRQLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21742; Mature: 21742

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLR
CCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHH
HLDDDAKTVVEFLKLQSRKIDMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQ
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCEEECC
EYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAVELSFSVIQDSDVEQLVKASL
CEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHH
SLQQKQLKLRQLSR
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLR
CCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHH
HLDDDAKTVVEFLKLQSRKIDMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQ
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCEEECC
EYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAVELSFSVIQDSDVEQLVKASL
CEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHH
SLQQKQLKLRQLSR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA