| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961370
Identifier: 157961370
GI number: 157961370
Start: 1880594
End: 1881178
Strand: Reverse
Name: 157961370
Synonym: Spea_1544
Alternate gene names: NA
Gene position: 1881178-1880594 (Counterclockwise)
Preceding gene: 157961374
Following gene: 157961369
Centisome position: 36.35
GC content: 46.84
Gene sequence:
>585_bases TTGTTAACTGACTCTAGCGCCTATTTTAGTATTAATCACCCATTTGATGTCTATTTGTGTCCTTGGGACGAAGCCAAGCC GCTGCCATCAGCTGAGCAGTTGAGCTTTATGTTTCCGACTAGCTTACAGCTGATTAGTGACGTGAAGGCTCTCGAATCAG ACTGTCTATTACAGCTGCGTCATCTCGATGACGATGCAAAAACCGTCGTGGAATTTTTAAAGCTGCAATCGCGTAAAATC GACATGGTGCTACAACACATCATGGCGAAAGAGGAATACCAAGGCACCCATTACATCGGCAAGCAATTTGGTGGCAGCGG CATCACGCTGATTAGCCCATCGCCTTTAGTACTCGGGCAAGAGTACCAGGTGACGCTACACATCAAAGAAGAGCTAGTCG CCCTGCTCTGCTTAGCTAAAGTCAATGGCTGCTCACCGATCGAAAACGCTGATGATCCTAACACGGCGCAATATGCAGTG GAGCTAAGCTTTAGTGTGATCCAAGATAGCGACGTTGAACAGTTGGTTAAAGCCAGCCTAAGTTTGCAGCAAAAACAACT CAAGCTACGACAGTTATCACGCTAA
Upstream 100 bases:
>100_bases CGCTTAAACAGTCAGACATTTGAATGTCTAACCTTGCTAAATCATAAAGATGCGCACGATAATAGGGGTATTAGCCCCCT AAAAACAAGAGGCAACCCCA
Downstream 100 bases:
>100_bases CCTAAAAAGAATTTTCACTGGCATGCGCTGAGACAAGCCTCTACAATACTTAGCAAGTTTACTGCTATCTGGACTTGTTT CCTCGCCTTAATGAATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLRHLDDDAKTVVEFLKLQSRKI DMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQEYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAV ELSFSVIQDSDVEQLVKASLSLQQKQLKLRQLSR
Sequences:
>Translated_194_residues MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLRHLDDDAKTVVEFLKLQSRKI DMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQEYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAV ELSFSVIQDSDVEQLVKASLSLQQKQLKLRQLSR >Mature_194_residues MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLRHLDDDAKTVVEFLKLQSRKI DMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQEYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAV ELSFSVIQDSDVEQLVKASLSLQQKQLKLRQLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21742; Mature: 21742
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLR CCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHH HLDDDAKTVVEFLKLQSRKIDMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQ HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCEEECC EYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAVELSFSVIQDSDVEQLVKASL CEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHH SLQQKQLKLRQLSR HHHHHHHHHHHHCC >Mature Secondary Structure MLTDSSAYFSINHPFDVYLCPWDEAKPLPSAEQLSFMFPTSLQLISDVKALESDCLLQLR CCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHH HLDDDAKTVVEFLKLQSRKIDMVLQHIMAKEEYQGTHYIGKQFGGSGITLISPSPLVLGQ HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCEEECC EYQVTLHIKEELVALLCLAKVNGCSPIENADDPNTAQYAVELSFSVIQDSDVEQLVKASL CEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHH SLQQKQLKLRQLSR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA