| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961359
Identifier: 157961359
GI number: 157961359
Start: 1862800
End: 1865223
Strand: Direct
Name: 157961359
Synonym: Spea_1533
Alternate gene names: NA
Gene position: 1862800-1865223 (Clockwise)
Preceding gene: 157961357
Following gene: 157961361
Centisome position: 36.0
GC content: 43.4
Gene sequence:
>2424_bases ATGAAGTCAGCTTATAGCATTTTTATTGCTTTTATATGGTCATTTATTCTCGTTGGTTGTAGTGGCGGAGGGAGTATTTC TGAAGACGATGATGGTGGAACGACTCCAGATCCAACAACTATTTCAATAGCGTTAAGTACGACAAATTCACTTATTTCGG TTGCAGAAAATGCACAGATTACAGCTAAGGTGACCGATTCAAATGGAGCAGCAGTTAGCACGTTAGTCTCATTTTCATTA AATAATGCAACCTACGGCTCTTTTGATCCTGCAACTGGTGAAGTCTCTACTGATAATGAAGGCAATGCAGTCGTTACCTT AAACACAGCTTCTATTAATACAGGAGCCACGGTTACAGCAACAACTTCTACTGGAGAAGCCGCCAGTATTAATGTCACTA TGGTCGGTGATGGTGGTGATGCGGGTAATGGTGCATCGGTAGCCATCAGCTTAGTTGATGAAAATGATCAGCCTACATCA GGGATCAGTAGTCTATCTCCAGGTTTCTTGGTGGCGACAGTGACTGGGCTTTCTAAAGAGACGATTGTTACCTTTTCTAC AAGCCGCGGTGAGATCCCTATTAATACCGCAGTAACCGAAAATGGGGTCGCTCGAGCACAAATACTCGCCGGAGCTGAAC CTGGGGCAGCCAATGCTACAGTAACGATTTTAACTGGTGAAACAGCCAGTCTCCCCTTTACTATTGGAGCAACAAACGTC CTTATGGGAAGTGGTACGCCATTTGAGTCAGGTGTAGCTTCAATTAATCCAGTCAGTGTATCTGCTGGTGGTACCGCAAG TATTTCGGTTACCTTGCAAGACGATCAAGGCAAGTTGTTCACTGAACCCGCAGAAGTAATCTTTTCTTCTATCTGTTCAG CTAAAGCATCACCTGAAGCTGAAATTAGTTCACCTGTTATTGCCGTTAACGGTGTTGCGACCAGTACCTATCTTGCAAAA GGGTGTGTTGGAGAGGATAGTGTTAATGTTAGTGCCAATGTAGGTGGTAAAGCATTAACGGCTTCTGCTAAGTTGACAGT GCTGCCAGCCAGTATTGGTAGTATCTATTTCGTCGAGGCTCTGCCCGAGAATATTCGTTTAAAAGGCACTGGTGGTGCTG AAGCATCGACAGTTAAATTTAAAGTACTAGATAGTAACGGTAATCCAGTTAAAAACCAGCAAGTGAACTTTTCTCTAAAT ACAGAAGCTGGAGATATTGAAATTGATCCCGCTAATGCAACAACGGATGCAAATGGTATTGCACAGACAGTAGTGAATTC AGGTACGGTTGCAACATCTGTGAGAGTGACTGCCATTGTTGATGGTAAAACGCCTGAAATATCTAGTCAGTCAAACTTAC TGGTGATTTCAACTGGTTTGCCAGATCAAGATAGTTTCTCTTTATCAGTTGATAATGCGAGTCCCGAAGGCTGGGATTAC GATGGCACAGAAGTTAACGTTACTGCTAGGCTTGCCGATGCCTTTAATAACCCAGTACCAGATGGAACGGCAGTTTCGTT CACTACCGAAGGTGGTTCTATTGATCCTTCTTGTGTAACGTTAAATGGCACTTGTTCTGTAAAGTGGACCAGTCAAAACC CAAGACCAACTGGTGCGGTTCTCGATAGTGCTCCTTCGGAAACACCAAAGCTTGGGCAACCATATGGCGGGCGTGTCACT ATTCTCGCAACCGCTATCGGTGAAGAATCCTTCCCTGATACGAACGGTAATGGTCGCTTTGATGCCTCCGAAGTTACTGA TTTTAATAGCAAGCATGATGTATCAGGTAATAGCTATGATCTAACAGAAGCATTTGTCGATCATAACGAAGACACAGTCT ATAACCCTGAAACAACTGGTGAAGACGGCGGTGATTTAGAAACATTCGCGGACTTTAACAATAATAGTGTTTTCGATGGT GCAGATGGTCTATATAACGGTAGTTTATGTGCACTTGATGTAAACGGTACAGCTCATTCTGGCTGTTCAACGACAAATAA ATCATTAAACGTTAGAGCGAGTGCCGTGATCGTGATGGCAGGCAGTCACGCTTATTCATCGACTCCGGTTATCTCAGATA GCTGTATTGATAAACCTGGTGAAGTCGATGCTTGTGATGGCCTTAACGATAATAATACGCTAGATATTTTGGGTAAATCG ACAGGTGGCGTATCGATTATAGTAAGTGATCTACACAACCAACCGTTACCTTCTGGTACCATTTTGACCTTCAAGCCATC AGTTGGCAGTTTGGCAAGTAATGGCACATTTACTATTCCTTCGACTAATAAAAATGGCGCCTTGCCGTACAGTGTTGTGA TCAAAGGTGCTGATGACCCTGAGTCAGGTACGCTAGTTATTGAAGCTGTTACGCCAAATGGTGATTTAACACTGATTGCG ACAATATCAATGACCATTCATTGA
Upstream 100 bases:
>100_bases TGTTTATTGTGGAAAAGTTATGGGAAAATTGTGTAATGTAAGTTGCTAGGTGGCAGAAGTGTTGCCGAAAATAATAATCT GAGTAACAGGGAGTCTGACA
Downstream 100 bases:
>100_bases TGCATAATAACTGCTACGTGTGAGTAATAAGCTTCACCTAAAAAGCCCTGCGATAGCAGGGCTTTTTTTCAGCTCAAACC ATCTGTTTCAGTGGCAGCTA
Product: Ig domain-containing protein
Products: NA
Alternate protein names: Ig Domain Domain Protein; Intimin/Invasin Family Protein; Invasin Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MKSAYSIFIAFIWSFILVGCSGGGSISEDDDGGTTPDPTTISIALSTTNSLISVAENAQITAKVTDSNGAAVSTLVSFSL NNATYGSFDPATGEVSTDNEGNAVVTLNTASINTGATVTATTSTGEAASINVTMVGDGGDAGNGASVAISLVDENDQPTS GISSLSPGFLVATVTGLSKETIVTFSTSRGEIPINTAVTENGVARAQILAGAEPGAANATVTILTGETASLPFTIGATNV LMGSGTPFESGVASINPVSVSAGGTASISVTLQDDQGKLFTEPAEVIFSSICSAKASPEAEISSPVIAVNGVATSTYLAK GCVGEDSVNVSANVGGKALTASAKLTVLPASIGSIYFVEALPENIRLKGTGGAEASTVKFKVLDSNGNPVKNQQVNFSLN TEAGDIEIDPANATTDANGIAQTVVNSGTVATSVRVTAIVDGKTPEISSQSNLLVISTGLPDQDSFSLSVDNASPEGWDY DGTEVNVTARLADAFNNPVPDGTAVSFTTEGGSIDPSCVTLNGTCSVKWTSQNPRPTGAVLDSAPSETPKLGQPYGGRVT ILATAIGEESFPDTNGNGRFDASEVTDFNSKHDVSGNSYDLTEAFVDHNEDTVYNPETTGEDGGDLETFADFNNNSVFDG ADGLYNGSLCALDVNGTAHSGCSTTNKSLNVRASAVIVMAGSHAYSSTPVISDSCIDKPGEVDACDGLNDNNTLDILGKS TGGVSIIVSDLHNQPLPSGTILTFKPSVGSLASNGTFTIPSTNKNGALPYSVVIKGADDPESGTLVIEAVTPNGDLTLIA TISMTIH
Sequences:
>Translated_807_residues MKSAYSIFIAFIWSFILVGCSGGGSISEDDDGGTTPDPTTISIALSTTNSLISVAENAQITAKVTDSNGAAVSTLVSFSL NNATYGSFDPATGEVSTDNEGNAVVTLNTASINTGATVTATTSTGEAASINVTMVGDGGDAGNGASVAISLVDENDQPTS GISSLSPGFLVATVTGLSKETIVTFSTSRGEIPINTAVTENGVARAQILAGAEPGAANATVTILTGETASLPFTIGATNV LMGSGTPFESGVASINPVSVSAGGTASISVTLQDDQGKLFTEPAEVIFSSICSAKASPEAEISSPVIAVNGVATSTYLAK GCVGEDSVNVSANVGGKALTASAKLTVLPASIGSIYFVEALPENIRLKGTGGAEASTVKFKVLDSNGNPVKNQQVNFSLN TEAGDIEIDPANATTDANGIAQTVVNSGTVATSVRVTAIVDGKTPEISSQSNLLVISTGLPDQDSFSLSVDNASPEGWDY DGTEVNVTARLADAFNNPVPDGTAVSFTTEGGSIDPSCVTLNGTCSVKWTSQNPRPTGAVLDSAPSETPKLGQPYGGRVT ILATAIGEESFPDTNGNGRFDASEVTDFNSKHDVSGNSYDLTEAFVDHNEDTVYNPETTGEDGGDLETFADFNNNSVFDG ADGLYNGSLCALDVNGTAHSGCSTTNKSLNVRASAVIVMAGSHAYSSTPVISDSCIDKPGEVDACDGLNDNNTLDILGKS TGGVSIIVSDLHNQPLPSGTILTFKPSVGSLASNGTFTIPSTNKNGALPYSVVIKGADDPESGTLVIEAVTPNGDLTLIA TISMTIH >Mature_807_residues MKSAYSIFIAFIWSFILVGCSGGGSISEDDDGGTTPDPTTISIALSTTNSLISVAENAQITAKVTDSNGAAVSTLVSFSL NNATYGSFDPATGEVSTDNEGNAVVTLNTASINTGATVTATTSTGEAASINVTMVGDGGDAGNGASVAISLVDENDQPTS GISSLSPGFLVATVTGLSKETIVTFSTSRGEIPINTAVTENGVARAQILAGAEPGAANATVTILTGETASLPFTIGATNV LMGSGTPFESGVASINPVSVSAGGTASISVTLQDDQGKLFTEPAEVIFSSICSAKASPEAEISSPVIAVNGVATSTYLAK GCVGEDSVNVSANVGGKALTASAKLTVLPASIGSIYFVEALPENIRLKGTGGAEASTVKFKVLDSNGNPVKNQQVNFSLN TEAGDIEIDPANATTDANGIAQTVVNSGTVATSVRVTAIVDGKTPEISSQSNLLVISTGLPDQDSFSLSVDNASPEGWDY DGTEVNVTARLADAFNNPVPDGTAVSFTTEGGSIDPSCVTLNGTCSVKWTSQNPRPTGAVLDSAPSETPKLGQPYGGRVT ILATAIGEESFPDTNGNGRFDASEVTDFNSKHDVSGNSYDLTEAFVDHNEDTVYNPETTGEDGGDLETFADFNNNSVFDG ADGLYNGSLCALDVNGTAHSGCSTTNKSLNVRASAVIVMAGSHAYSSTPVISDSCIDKPGEVDACDGLNDNNTLDILGKS TGGVSIIVSDLHNQPLPSGTILTFKPSVGSLASNGTFTIPSTNKNGALPYSVVIKGADDPESGTLVIEAVTPNGDLTLIA TISMTIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81653; Mature: 81653
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1 L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAYSIFIAFIWSFILVGCSGGGSISEDDDGGTTPDPTTISIALSTTNSLISVAENAQI CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCEE TAKVTDSNGAAVSTLVSFSLNNATYGSFDPATGEVSTDNEGNAVVTLNTASINTGATVTA EEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEE TTSTGEAASINVTMVGDGGDAGNGASVAISLVDENDQPTSGISSLSPGFLVATVTGLSKE ECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCEEEEEEECCCCE TIVTFSTSRGEIPINTAVTENGVARAQILAGAEPGAANATVTILTGETASLPFTIGATNV EEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCEE LMGSGTPFESGVASINPVSVSAGGTASISVTLQDDQGKLFTEPAEVIFSSICSAKASPEA EEECCCCHHCCCCCCCEEEEECCCCEEEEEEEECCCCCEECCHHHHHHHHHHCCCCCCCC EISSPVIAVNGVATSTYLAKGCVGEDSVNVSANVGGKALTASAKLTVLPASIGSIYFVEA CCCCCEEEEECCEEHHHHHHCCCCCCCEEEEECCCCEEEEECEEEEEEECCCCCEEEEEE LPENIRLKGTGGAEASTVKFKVLDSNGNPVKNQQVNFSLNTEAGDIEIDPANATTDANGI CCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCHH AQTVVNSGTVATSVRVTAIVDGKTPEISSQSNLLVISTGLPDQDSFSLSVDNASPEGWDY HHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCC DGTEVNVTARLADAFNNPVPDGTAVSFTTEGGSIDPSCVTLNGTCSVKWTSQNPRPTGAV CCCEEEEEEEEEHHHCCCCCCCCEEEEEECCCCCCCCEEEECCEEEEEECCCCCCCCCCE LDSAPSETPKLGQPYGGRVTILATAIGEESFPDTNGNGRFDASEVTDFNSKHDVSGNSYD ECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCEE LTEAFVDHNEDTVYNPETTGEDGGDLETFADFNNNSVFDGADGLYNGSLCALDVNGTAHS HHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCEEEEECCCCCCC GCSTTNKSLNVRASAVIVMAGSHAYSSTPVISDSCIDKPGEVDACDGLNDNNTLDILGKS CCCCCCCCEEEEEEEEEEEECCCCCCCCCEECHHHCCCCCCCCCCCCCCCCCEEEEEECC TGGVSIIVSDLHNQPLPSGTILTFKPSVGSLASNGTFTIPSTNKNGALPYSVVIKGADDP CCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCC ESGTLVIEAVTPNGDLTLIATISMTIH CCCEEEEEEECCCCCEEEEEEEEEEEC >Mature Secondary Structure MKSAYSIFIAFIWSFILVGCSGGGSISEDDDGGTTPDPTTISIALSTTNSLISVAENAQI CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCEE TAKVTDSNGAAVSTLVSFSLNNATYGSFDPATGEVSTDNEGNAVVTLNTASINTGATVTA EEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEE TTSTGEAASINVTMVGDGGDAGNGASVAISLVDENDQPTSGISSLSPGFLVATVTGLSKE ECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCEEEEEEECCCCE TIVTFSTSRGEIPINTAVTENGVARAQILAGAEPGAANATVTILTGETASLPFTIGATNV EEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCEE LMGSGTPFESGVASINPVSVSAGGTASISVTLQDDQGKLFTEPAEVIFSSICSAKASPEA EEECCCCHHCCCCCCCEEEEECCCCEEEEEEEECCCCCEECCHHHHHHHHHHCCCCCCCC EISSPVIAVNGVATSTYLAKGCVGEDSVNVSANVGGKALTASAKLTVLPASIGSIYFVEA CCCCCEEEEECCEEHHHHHHCCCCCCCEEEEECCCCEEEEECEEEEEEECCCCCEEEEEE LPENIRLKGTGGAEASTVKFKVLDSNGNPVKNQQVNFSLNTEAGDIEIDPANATTDANGI CCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCHH AQTVVNSGTVATSVRVTAIVDGKTPEISSQSNLLVISTGLPDQDSFSLSVDNASPEGWDY HHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCC DGTEVNVTARLADAFNNPVPDGTAVSFTTEGGSIDPSCVTLNGTCSVKWTSQNPRPTGAV CCCEEEEEEEEEHHHCCCCCCCCEEEEEECCCCCCCCEEEECCEEEEEECCCCCCCCCCE LDSAPSETPKLGQPYGGRVTILATAIGEESFPDTNGNGRFDASEVTDFNSKHDVSGNSYD ECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCEE LTEAFVDHNEDTVYNPETTGEDGGDLETFADFNNNSVFDGADGLYNGSLCALDVNGTAHS HHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCEEEEECCCCCCC GCSTTNKSLNVRASAVIVMAGSHAYSSTPVISDSCIDKPGEVDACDGLNDNNTLDILGKS CCCCCCCCEEEEEEEEEEEECCCCCCCCCEECHHHCCCCCCCCCCCCCCCCCEEEEEECC TGGVSIIVSDLHNQPLPSGTILTFKPSVGSLASNGTFTIPSTNKNGALPYSVVIKGADDP CCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCC ESGTLVIEAVTPNGDLTLIATISMTIH CCCEEEEEEECCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA