| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is gsk [H]
Identifier: 157961356
GI number: 157961356
Start: 1859148
End: 1860476
Strand: Direct
Name: gsk [H]
Synonym: Spea_1530
Alternate gene names: 157961356
Gene position: 1859148-1860476 (Clockwise)
Preceding gene: 157961355
Following gene: 157961357
Centisome position: 35.93
GC content: 45.45
Gene sequence:
>1329_bases ATGCCGAATGAAAGAGAGCTCAATATGAAGTTTCCAGGTCAGCGTAAGTCTAAACATTATTTTCCAGTTAAAAACCGCGA TCCACTGCTTGCACAGTTGATCCAACAGCCTCTACCGATTTCAACCTACATCTCTGGTATCGATCAGACGCTTGTAGACA TTGAGGCGAAAGTGGAAGATGAGTTATTGAGCCGCTACGAGCTGCCTAAAGGCAACTCAACCTTGATCGATGATGACAAG GCCCATGCACTTTATACTGAGCTTAAAAGCAATGAATTGATCAGCGACGAGTTTGCTGGTGGCACTATCGGTAACACAGT ACATAACTACTCAATTCTAGCCGATGACCGCTCTGTGTTATTTGGCGTAATGAGCAAAAACATTGAGGTGGGGAGCTATG CATATCGCTACCTTTGTAATACTTCTTCTAAAGTTGATCTAAACTATTTGCAACCTGTAGCGGGTCCAATTGGTCGCTGT TTCACTCTTATTTCAGAATGCGGTGAGCGTACTTTTGCCATCAGTAAAGGCTCAATGGATCAGCTTACACCTGAATATAT CGATAAAGAGGTGGTTCAAGGTGGATCGGCGCTCATTCTAACCGCCTACTTAATGCGCGCCAGTGGTGATGATCAGATAA CTGAAGCTGCGATGACGGCAATCAGTTACGCTAAAGAAGCAGAGGTGCCTGTTGTTCTGACACTAGGTACGCGTTTCTTA ATCGAAGAAGATCCAAAATGGTGGCAGGAGTTCATCAAAGAGCACGTGACTATTTTGGCGATGAATGAAGATGAAGGTGA AGCATTAACAGGCTTTAGTGATCCACTGCAAGCCAGTGAAGCTGCGCTTGAGTGGTGTGACATGGTATTGACTACAGCGG GTCCTTTAGGTCTTTACACTGCAGGTTACACAGAAGACTCAGAAAAGCGTGAAACTAGCCATACCTTGCTGCCAGGTTCA ATTCCTGAGTTTAACCGCTACGAGTTCTCTCGTCCTAAATTAAAGGCTGATTGCGATTCACCTTTAAAGGTGTACGCGCA TATCTCTCCTTATATGGGGGGGCCAGAGATTATTCGTAACACTAACGGTGCAGGCGATGGTGCATTAGCAGCTTTGCTGC ACGACTTAGCGTCAAATACTTTCCATAAGACCAATGTTCCGGGTTCGAGCAAGCATAAGCGTGATGGTTTGTGTTACTCA TCGTTCTCGCAAATTTGTAAGTATGCTAACCGCGTGGCTTATGAAGTGCTGGCTCAACATAGCCCACGACTCTCTCGAGG CCTACCAGAGCGTGAAGACAGCTTAGAAGAGTCATACTGGGAAAGATAA
Upstream 100 bases:
>100_bases GTTTTTATTATGGCCAGTTGCTAGAAGTGCAGAGTTTGCTTGTTCGTATTGAATAAACAGCTTGAGATAACTTACCCGTT TTAATTTATATTTTGCATGG
Downstream 100 bases:
>100_bases CCCTAAGTAGCGCCTATAGGCGGCTATAAGCAATATAAAGGCATAACTTGGTGATCAGGTTATGCCTTTTTTGAATCTAC TCTAACATAACAATAAAAAA
Product: inosine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MPNERELNMKFPGQRKSKHYFPVKNRDPLLAQLIQQPLPISTYISGIDQTLVDIEAKVEDELLSRYELPKGNSTLIDDDK AHALYTELKSNELISDEFAGGTIGNTVHNYSILADDRSVLFGVMSKNIEVGSYAYRYLCNTSSKVDLNYLQPVAGPIGRC FTLISECGERTFAISKGSMDQLTPEYIDKEVVQGGSALILTAYLMRASGDDQITEAAMTAISYAKEAEVPVVLTLGTRFL IEEDPKWWQEFIKEHVTILAMNEDEGEALTGFSDPLQASEAALEWCDMVLTTAGPLGLYTAGYTEDSEKRETSHTLLPGS IPEFNRYEFSRPKLKADCDSPLKVYAHISPYMGGPEIIRNTNGAGDGALAALLHDLASNTFHKTNVPGSSKHKRDGLCYS SFSQICKYANRVAYEVLAQHSPRLSRGLPEREDSLEESYWER
Sequences:
>Translated_442_residues MPNERELNMKFPGQRKSKHYFPVKNRDPLLAQLIQQPLPISTYISGIDQTLVDIEAKVEDELLSRYELPKGNSTLIDDDK AHALYTELKSNELISDEFAGGTIGNTVHNYSILADDRSVLFGVMSKNIEVGSYAYRYLCNTSSKVDLNYLQPVAGPIGRC FTLISECGERTFAISKGSMDQLTPEYIDKEVVQGGSALILTAYLMRASGDDQITEAAMTAISYAKEAEVPVVLTLGTRFL IEEDPKWWQEFIKEHVTILAMNEDEGEALTGFSDPLQASEAALEWCDMVLTTAGPLGLYTAGYTEDSEKRETSHTLLPGS IPEFNRYEFSRPKLKADCDSPLKVYAHISPYMGGPEIIRNTNGAGDGALAALLHDLASNTFHKTNVPGSSKHKRDGLCYS SFSQICKYANRVAYEVLAQHSPRLSRGLPEREDSLEESYWER >Mature_441_residues PNERELNMKFPGQRKSKHYFPVKNRDPLLAQLIQQPLPISTYISGIDQTLVDIEAKVEDELLSRYELPKGNSTLIDDDKA HALYTELKSNELISDEFAGGTIGNTVHNYSILADDRSVLFGVMSKNIEVGSYAYRYLCNTSSKVDLNYLQPVAGPIGRCF TLISECGERTFAISKGSMDQLTPEYIDKEVVQGGSALILTAYLMRASGDDQITEAAMTAISYAKEAEVPVVLTLGTRFLI EEDPKWWQEFIKEHVTILAMNEDEGEALTGFSDPLQASEAALEWCDMVLTTAGPLGLYTAGYTEDSEKRETSHTLLPGSI PEFNRYEFSRPKLKADCDSPLKVYAHISPYMGGPEIIRNTNGAGDGALAALLHDLASNTFHKTNVPGSSKHKRDGLCYSS FSQICKYANRVAYEVLAQHSPRLSRGLPEREDSLEESYWER
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1786684, Length=434, Percent_Identity=67.9723502304147, Blast_Score=630, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.73 [H]
Molecular weight: Translated: 49183; Mature: 49052
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNERELNMKFPGQRKSKHYFPVKNRDPLLAQLIQQPLPISTYISGIDQTLVDIEAKVED CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ELLSRYELPKGNSTLIDDDKAHALYTELKSNELISDEFAGGTIGNTVHNYSILADDRSVL HHHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHCEEEEECCHHHH FGVMSKNIEVGSYAYRYLCNTSSKVDLNYLQPVAGPIGRCFTLISECGERTFAISKGSMD HHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHH QLTPEYIDKEVVQGGSALILTAYLMRASGDDQITEAAMTAISYAKEAEVPVVLTLGTRFL HCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEE IEEDPKWWQEFIKEHVTILAMNEDEGEALTGFSDPLQASEAALEWCDMVLTTAGPLGLYT EECCHHHHHHHHHCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE AGYTEDSEKRETSHTLLPGSIPEFNRYEFSRPKLKADCDSPLKVYAHISPYMGGPEIIRN CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCC TNGAGDGALAALLHDLASNTFHKTNVPGSSKHKRDGLCYSSFSQICKYANRVAYEVLAQH CCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC SPRLSRGLPEREDSLEESYWER CCHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure PNERELNMKFPGQRKSKHYFPVKNRDPLLAQLIQQPLPISTYISGIDQTLVDIEAKVED CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ELLSRYELPKGNSTLIDDDKAHALYTELKSNELISDEFAGGTIGNTVHNYSILADDRSVL HHHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHCEEEEECCHHHH FGVMSKNIEVGSYAYRYLCNTSSKVDLNYLQPVAGPIGRCFTLISECGERTFAISKGSMD HHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHH QLTPEYIDKEVVQGGSALILTAYLMRASGDDQITEAAMTAISYAKEAEVPVVLTLGTRFL HCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEE IEEDPKWWQEFIKEHVTILAMNEDEGEALTGFSDPLQASEAALEWCDMVLTTAGPLGLYT EECCHHHHHHHHHCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE AGYTEDSEKRETSHTLLPGSIPEFNRYEFSRPKLKADCDSPLKVYAHISPYMGGPEIIRN CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCC TNGAGDGALAALLHDLASNTFHKTNVPGSSKHKRDGLCYSSFSQICKYANRVAYEVLAQH CCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC SPRLSRGLPEREDSLEESYWER CCHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]