Click here to switch to the map view.

The map label for this gene is ybeQ [C]

Identifier: 157961337

GI number: 157961337

Start: 1832071

End: 1832754

Strand: Direct

Name: ybeQ [C]

Synonym: Spea_1511

Alternate gene names: 157961337

Gene position: 1832071-1832754 (Clockwise)

Preceding gene: 157961335

Following gene: 157961338

Centisome position: 35.41

GC content: 42.25

Gene sequence:

>684_bases
GTGAAAGAAAAACTTAAAGGGCTGGGGTTCTCCTTAGTCATATTCATCGCCATTATTATCTTCAATACGCTGTTTGGTGC
GCCGCCAGTTGCCCTTAGCGGTATCGAGAAGTACAGCGCAAAAGTATCAGTTGAAGAGGCTAGAGAGTTAGGCTTTATCC
TCTTTAACAATAAGCACTACTCAGATGCGCGTGCATTTTTTACTCCCTCTGCTCAGCAAGGCGATGTAGGCAGCCAACTG
GTACTGGCTACACTCTATTTTTACGATCTGACAACAGTTAACAATTATCAGCAGGCATATCGCTGGTTTAGTAAGAATAG
CGATAATGCTTTTGCTCAATACTATTTAAGCTTGTTATATCACTTTGGCCATTACGTACCTCAAAGTCAGGTTAAATCCT
TATTTTGGATTGAAAAATCCGCCGTGCAATCTTTCCCTGCTGGCCAACATAATTTGGCTGTTCACTACTTTAACCTTGGT
GATTATAGCCAAGCGTACCTTTGGGGCTTGTACGCTAGAGCTAATGATTTTTCTCAGTCTCGAAGCTTAGTTAAACAAGC
CGCAGGACACTTGACGCCACAAGAGAAAGCCAACGCTGATCAAACCTTTAGAAACACTAATGCCAAGCATTCTTGGGATG
ATGACAACAATCAGATTAGCGCACTGTTAGAGCAGGTATTTTAA

Upstream 100 bases:

>100_bases
GCGTTTTCTATGTGGTTGCTGCTCTAGTTGCTTTATGTCAAACTTCAGCCGTTTTAAGCGCCCACTTCACGTATGCAGTT
AACTTAAATGGATCGATAGT

Downstream 100 bases:

>100_bases
CCATGAAGATAAGTTCGCTGTCATTGGAGTTAGCATCTGGTCAAACTCAAGAGTTTGGGGCGGTGACAAGCCGCACTAAC
TTAAAGCATCGTCTCAAGGA

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: Sel1 Domain Protein Repeat-Containing Protein; TPR Repeat-Containing SEL1 Subfamily Protein; Tyrosine -Like Repeat Protein

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKEKLKGLGFSLVIFIAIIIFNTLFGAPPVALSGIEKYSAKVSVEEARELGFILFNNKHYSDARAFFTPSAQQGDVGSQL
VLATLYFYDLTTVNNYQQAYRWFSKNSDNAFAQYYLSLLYHFGHYVPQSQVKSLFWIEKSAVQSFPAGQHNLAVHYFNLG
DYSQAYLWGLYARANDFSQSRSLVKQAAGHLTPQEKANADQTFRNTNAKHSWDDDNNQISALLEQVF

Sequences:

>Translated_227_residues
MKEKLKGLGFSLVIFIAIIIFNTLFGAPPVALSGIEKYSAKVSVEEARELGFILFNNKHYSDARAFFTPSAQQGDVGSQL
VLATLYFYDLTTVNNYQQAYRWFSKNSDNAFAQYYLSLLYHFGHYVPQSQVKSLFWIEKSAVQSFPAGQHNLAVHYFNLG
DYSQAYLWGLYARANDFSQSRSLVKQAAGHLTPQEKANADQTFRNTNAKHSWDDDNNQISALLEQVF
>Mature_227_residues
MKEKLKGLGFSLVIFIAIIIFNTLFGAPPVALSGIEKYSAKVSVEEARELGFILFNNKHYSDARAFFTPSAQQGDVGSQL
VLATLYFYDLTTVNNYQQAYRWFSKNSDNAFAQYYLSLLYHFGHYVPQSQVKSLFWIEKSAVQSFPAGQHNLAVHYFNLG
DYSQAYLWGLYARANDFSQSRSLVKQAAGHLTPQEKANADQTFRNTNAKHSWDDDNNQISALLEQVF

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25770; Mature: 25770

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKLKGLGFSLVIFIAIIIFNTLFGAPPVALSGIEKYSAKVSVEEARELGFILFNNKHY
CCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCEEEECCCCC
SDARAFFTPSAQQGDVGSQLVLATLYFYDLTTVNNYQQAYRWFSKNSDNAFAQYYLSLLY
CCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HFGHYVPQSQVKSLFWIEKSAVQSFPAGQHNLAVHYFNLGDYSQAYLWGLYARANDFSQS
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHHH
RSLVKQAAGHLTPQEKANADQTFRNTNAKHSWDDDNNQISALLEQVF
HHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MKEKLKGLGFSLVIFIAIIIFNTLFGAPPVALSGIEKYSAKVSVEEARELGFILFNNKHY
CCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCEEEECCCCC
SDARAFFTPSAQQGDVGSQLVLATLYFYDLTTVNNYQQAYRWFSKNSDNAFAQYYLSLLY
CCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HFGHYVPQSQVKSLFWIEKSAVQSFPAGQHNLAVHYFNLGDYSQAYLWGLYARANDFSQS
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHHH
RSLVKQAAGHLTPQEKANADQTFRNTNAKHSWDDDNNQISALLEQVF
HHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA