| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is apt [H]
Identifier: 157961333
GI number: 157961333
Start: 1826790
End: 1827341
Strand: Direct
Name: apt [H]
Synonym: Spea_1507
Alternate gene names: 157961333
Gene position: 1826790-1827341 (Clockwise)
Preceding gene: 157961332
Following gene: 157961334
Centisome position: 35.3
GC content: 41.49
Gene sequence:
>552_bases ATGGTAATGAATACTGACAGCTTGGCACTAATAAAGAACAGCATTAAAACCATCCCTAATTATCCTAAAGAAGGGATCCT GTTTAGAGATGTGACTAGCTTATTAGAAGATCCACAAGCCTATAAACTCACCATTGGCCTTTTAGTTGAGCACTATAAAG ACCAAGGGTTTACTAAGGTTGTCGGTACTGAAGCGCGCGGCTTTTTGTTTGGCGCACCTTTAGCCCTTGAGCTAGGCATA GGCTTTGTACCTGTTCGTAAGCCTGGTAAATTACCAAGAGAAACGATTTCAGAAAGCTATGAGCTTGAATATGGTCATGA TGTATTAGAGATCCATGTTGATGCGATCAATGCTGACGACAAAGTACTGGTAATCGATGACTTACTTGCAACTGGCGGTA CAATCGAAGCGACTGTTAAGCTTATCCGTAAATTAGGCGGAAGCGTAAACGATGCCGCTTTTGTTATTTCATTACCTGAC TTAGGTGGTGAAGAGCGTCTAAAAGCGATGGATCTTAAGCTAATCAGTCTTTGTGAGTTTGAAGGCGAATAA
Upstream 100 bases:
>100_bases GCTTGATGCCGATTTTTACACTTCGATGACATCTATACCGGCATAATCAAATTTTGGGGCTGGGGATGTCAGCAAACTAA AGTAGATTAAGTAAAGAATT
Downstream 100 bases:
>100_bases GTCTATAGGCTGCTGCGATAAACAGTAGCAATAAGGAGTTGGCAAAACTGTCGATTCTTTATCTTAAAAGGTGAATTAAT CACCGCCAAATCGCTCCTAA
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT [H]
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MVMNTDSLALIKNSIKTIPNYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKDQGFTKVVGTEARGFLFGAPLALELGI GFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINADDKVLVIDDLLATGGTIEATVKLIRKLGGSVNDAAFVISLPD LGGEERLKAMDLKLISLCEFEGE
Sequences:
>Translated_183_residues MVMNTDSLALIKNSIKTIPNYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKDQGFTKVVGTEARGFLFGAPLALELGI GFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINADDKVLVIDDLLATGGTIEATVKLIRKLGGSVNDAAFVISLPD LGGEERLKAMDLKLISLCEFEGE >Mature_183_residues MVMNTDSLALIKNSIKTIPNYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKDQGFTKVVGTEARGFLFGAPLALELGI GFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINADDKVLVIDDLLATGGTIEATVKLIRKLGGSVNDAAFVISLPD LGGEERLKAMDLKLISLCEFEGE
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4502171, Length=182, Percent_Identity=40.6593406593407, Blast_Score=141, Evalue=3e-34, Organism=Homo sapiens, GI71773201, Length=133, Percent_Identity=45.1127819548872, Blast_Score=121, Evalue=3e-28, Organism=Escherichia coli, GI1786675, Length=183, Percent_Identity=72.1311475409836, Blast_Score=261, Evalue=3e-71, Organism=Caenorhabditis elegans, GI17509087, Length=173, Percent_Identity=42.7745664739884, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323619, Length=170, Percent_Identity=40.5882352941176, Blast_Score=116, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320649, Length=164, Percent_Identity=39.0243902439024, Blast_Score=100, Evalue=1e-22, Organism=Drosophila melanogaster, GI17136334, Length=177, Percent_Identity=45.1977401129944, Blast_Score=138, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 19986; Mature: 19986
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMNTDSLALIKNSIKTIPNYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKDQGFTKV CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCEEE VGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINADD ECCCCCCEEEECCEEEEECCCEEECCCCCCCCHHHHCCCCCCCCCCEEEEEEEEEECCCC KVLVIDDLLATGGTIEATVKLIRKLGGSVNDAAFVISLPDLGGEERLKAMDLKLISLCEF CEEEEEHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC EGE CCC >Mature Secondary Structure MVMNTDSLALIKNSIKTIPNYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKDQGFTKV CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCEEE VGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINADD ECCCCCCEEEECCEEEEECCCEEECCCCCCCCHHHHCCCCCCCCCCEEEEEEEEEECCCC KVLVIDDLLATGGTIEATVKLIRKLGGSVNDAAFVISLPDLGGEERLKAMDLKLISLCEF CEEEEEHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC EGE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA