| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ybaN [H]
Identifier: 157961332
GI number: 157961332
Start: 1826164
End: 1826532
Strand: Direct
Name: ybaN [H]
Synonym: Spea_1506
Alternate gene names: 157961332
Gene position: 1826164-1826532 (Clockwise)
Preceding gene: 157961331
Following gene: 157961333
Centisome position: 35.29
GC content: 40.65
Gene sequence:
>369_bases ATGGCGTTAAAGCGTGGCTTTTTTCTTATTATCGGACTTTGCAGTCTAGTCTTAGGCTTGTTAGGAATATTGCTACCTAT ATTGCCAACTGTGCCGTTTATTTTATTGGCCGCATATTGTTTTGCTCGCTCTAGTGATAGGCTTTACCAGTGGTTGATGA GTCACCCTTGGTTTGCCGATGCACTGAAAAATTGGCAGTCGCAGGGTGCTATTCGCAGAAGTTTAAAGAAGAAGGCCTAT ATAGTAAGTAGCCTGAGTTTTTTAACCAGTATTGTGATTGTTCCGCTAATTTGGGTAAAAGTGATGCTGGCATGTCTTGG AACAGGCTTAATTATTTATCTGAGAAGCATTCCTGAAATTGACGGTTAA
Upstream 100 bases:
>100_bases TGGTTAAAGATAGTGGGATTAATTTAATCCGCCTTTAAGCCAAGCTCGGGTATACTAGCCACTCAATACAGAGTGGCTTT TTGTTTTTTAGGATTGATTG
Downstream 100 bases:
>100_bases CTTCCCACTGTATTGATTCATCATATTGAAAATTAAGCCCTATTGTGGCTTTTCTTCAAAAGCCTCCCCACATAAAAACA ATTGAAACACAAAATAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MALKRGFFLIIGLCSLVLGLLGILLPILPTVPFILLAAYCFARSSDRLYQWLMSHPWFADALKNWQSQGAIRRSLKKKAY IVSSLSFLTSIVIVPLIWVKVMLACLGTGLIIYLRSIPEIDG
Sequences:
>Translated_122_residues MALKRGFFLIIGLCSLVLGLLGILLPILPTVPFILLAAYCFARSSDRLYQWLMSHPWFADALKNWQSQGAIRRSLKKKAY IVSSLSFLTSIVIVPLIWVKVMLACLGTGLIIYLRSIPEIDG >Mature_121_residues ALKRGFFLIIGLCSLVLGLLGILLPILPTVPFILLAAYCFARSSDRLYQWLMSHPWFADALKNWQSQGAIRRSLKKKAYI VSSLSFLTSIVIVPLIWVKVMLACLGTGLIIYLRSIPEIDG
Specific function: Unknown
COG id: COG2832
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786674, Length=119, Percent_Identity=44.5378151260504, Blast_Score=105, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007401 [H]
Pfam domain/function: PF04304 DUF454 [H]
EC number: NA
Molecular weight: Translated: 13639; Mature: 13508
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKRGFFLIIGLCSLVLGLLGILLPILPTVPFILLAAYCFARSSDRLYQWLMSHPWFAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH ALKNWQSQGAIRRSLKKKAYIVSSLSFLTSIVIVPLIWVKVMLACLGTGLIIYLRSIPEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DG CC >Mature Secondary Structure ALKRGFFLIIGLCSLVLGLLGILLPILPTVPFILLAAYCFARSSDRLYQWLMSHPWFAD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH ALKNWQSQGAIRRSLKKKAYIVSSLSFLTSIVIVPLIWVKVMLACLGTGLIIYLRSIPEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]