| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961309
Identifier: 157961309
GI number: 157961309
Start: 1805587
End: 1805994
Strand: Reverse
Name: 157961309
Synonym: Spea_1483
Alternate gene names: NA
Gene position: 1805994-1805587 (Counterclockwise)
Preceding gene: 157961310
Following gene: 157961308
Centisome position: 34.9
GC content: 41.91
Gene sequence:
>408_bases ATGGATAAAATGTATCGAAAATATGGCATTACAAGTATCAAAGCCATCGAACATCTAGTATTGATTATTATTGCAATTGC CACTGTTGTAGCAATTGGCCAAGAGATTAAACACATTTTTGATGTCGGTGCTGTTACGCTAGCCGATCTCTTATTATTGT TTATTTACCTCGAAGTACTGGCAATGGTGTCGCATTACGCTGAATCTGGCAAACTGCCAATCCGTATGCCACTTTATATT GCCATCGTCGCACTGGCCCGATATTTAATCTTAGATATGAAGGCAATGGATGATTGGCGAATTATTGCGATATCGCTATC GACTCTCACACTTGCCGCGACGGTGATAGTGATCCGTTGGGGGCAGCTGAAATTGCCTTATCCGCGCCCTAAAGAAGACG ATCTATAA
Upstream 100 bases:
>100_bases AGAAATTATCAAACGTAATTGTGAATAACGTCACACAGCGAACATCACAATTCTTCAATTTACTGGTACCCTTTATCAAA CGACTGCATTAGGGAACATC
Downstream 100 bases:
>100_bases CGACTACGCCCGAAGTGTTCACTTCGGGCGTTTTTACTACCTGCTGCTCCGCCACTTCTACTCAAATAACCAAAATTGTC TTTTTAATCCTTCCTCTGAG
Product: phosphate-starvation-inducible E
Products: NA
Alternate protein names: Protein PsiE
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MDKMYRKYGITSIKAIEHLVLIIIAIATVVAIGQEIKHIFDVGAVTLADLLLLFIYLEVLAMVSHYAESGKLPIRMPLYI AIVALARYLILDMKAMDDWRIIAISLSTLTLAATVIVIRWGQLKLPYPRPKEDDL
Sequences:
>Translated_135_residues MDKMYRKYGITSIKAIEHLVLIIIAIATVVAIGQEIKHIFDVGAVTLADLLLLFIYLEVLAMVSHYAESGKLPIRMPLYI AIVALARYLILDMKAMDDWRIIAISLSTLTLAATVIVIRWGQLKLPYPRPKEDDL >Mature_135_residues MDKMYRKYGITSIKAIEHLVLIIIAIATVVAIGQEIKHIFDVGAVTLADLLLLFIYLEVLAMVSHYAESGKLPIRMPLYI AIVALARYLILDMKAMDDWRIIAISLSTLTLAATVIVIRWGQLKLPYPRPKEDDL
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15208; Mature: 15208
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKMYRKYGITSIKAIEHLVLIIIAIATVVAIGQEIKHIFDVGAVTLADLLLLFIYLEVL CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVSHYAESGKLPIRMPLYIAIVALARYLILDMKAMDDWRIIAISLSTLTLAATVIVIRW HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHC GQLKLPYPRPKEDDL CCEECCCCCCCCCCC >Mature Secondary Structure MDKMYRKYGITSIKAIEHLVLIIIAIATVVAIGQEIKHIFDVGAVTLADLLLLFIYLEVL CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVSHYAESGKLPIRMPLYIAIVALARYLILDMKAMDDWRIIAISLSTLTLAATVIVIRW HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHC GQLKLPYPRPKEDDL CCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA