| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961308
Identifier: 157961308
GI number: 157961308
Start: 1805074
End: 1805370
Strand: Reverse
Name: 157961308
Synonym: Spea_1482
Alternate gene names: NA
Gene position: 1805370-1805074 (Counterclockwise)
Preceding gene: 157961309
Following gene: 157961306
Centisome position: 34.89
GC content: 44.11
Gene sequence:
>297_bases ATGGAAAGCTATCGGGAAGAAAGACGCAACTCAGCACGAGTGGATATGGAAGGCGAATCAGTTGTTATTGCCGTGCAGAG TGATGTAGATACCATCACCAAACCTGCTAAAGCCATCTGTATCGACCTATCTCGAAGAGGGGCACTATTAAAGTGCCAAC AAAACATGCCATTAGGAACCTTAATGACAATTACCTTTAACGCCAATCAAGACAATGAAAATACCGTTAAAGGACAAGTC TGCCGTTGCGCTCGCCTTAATGAGTCTAGCTTCCATGTTGCGCTTCAGCTCATATAA
Upstream 100 bases:
>100_bases TGTCCTGTTAAGAGCTTTAAGCTATTTCAATCAACTAATACCAGTCAGTGTAAGAAGTTGAACGAAGTTATGGCGCTAAA CCGAATAAGGGACTAACAGT
Downstream 100 bases:
>100_bases ATATGATAAAAAATAAAGCCTGCAGATGCAGGCTTTATTTTTACTGTATTCAATAATTCCAATCAGTATAACTAGTGACT GCAAATTCTATCTGCAGCCG
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGTLMTITFNANQDNENTVKGQV CRCARLNESSFHVALQLI
Sequences:
>Translated_98_residues MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGTLMTITFNANQDNENTVKGQV CRCARLNESSFHVALQLI >Mature_98_residues MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGTLMTITFNANQDNENTVKGQV CRCARLNESSFHVALQLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10944; Mature: 10944
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGT CCCHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCE LMTITFNANQDNENTVKGQVCRCARLNESSFHVALQLI EEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEC >Mature Secondary Structure MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGT CCCHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCE LMTITFNANQDNENTVKGQVCRCARLNESSFHVALQLI EEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA