The gene/protein map for NC_011961 is currently unavailable.
Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961308

Identifier: 157961308

GI number: 157961308

Start: 1805074

End: 1805370

Strand: Reverse

Name: 157961308

Synonym: Spea_1482

Alternate gene names: NA

Gene position: 1805370-1805074 (Counterclockwise)

Preceding gene: 157961309

Following gene: 157961306

Centisome position: 34.89

GC content: 44.11

Gene sequence:

>297_bases
ATGGAAAGCTATCGGGAAGAAAGACGCAACTCAGCACGAGTGGATATGGAAGGCGAATCAGTTGTTATTGCCGTGCAGAG
TGATGTAGATACCATCACCAAACCTGCTAAAGCCATCTGTATCGACCTATCTCGAAGAGGGGCACTATTAAAGTGCCAAC
AAAACATGCCATTAGGAACCTTAATGACAATTACCTTTAACGCCAATCAAGACAATGAAAATACCGTTAAAGGACAAGTC
TGCCGTTGCGCTCGCCTTAATGAGTCTAGCTTCCATGTTGCGCTTCAGCTCATATAA

Upstream 100 bases:

>100_bases
TGTCCTGTTAAGAGCTTTAAGCTATTTCAATCAACTAATACCAGTCAGTGTAAGAAGTTGAACGAAGTTATGGCGCTAAA
CCGAATAAGGGACTAACAGT

Downstream 100 bases:

>100_bases
ATATGATAAAAAATAAAGCCTGCAGATGCAGGCTTTATTTTTACTGTATTCAATAATTCCAATCAGTATAACTAGTGACT
GCAAATTCTATCTGCAGCCG

Product: type IV pilus assembly PilZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGTLMTITFNANQDNENTVKGQV
CRCARLNESSFHVALQLI

Sequences:

>Translated_98_residues
MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGTLMTITFNANQDNENTVKGQV
CRCARLNESSFHVALQLI
>Mature_98_residues
MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGTLMTITFNANQDNENTVKGQV
CRCARLNESSFHVALQLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10944; Mature: 10944

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGT
CCCHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCE
LMTITFNANQDNENTVKGQVCRCARLNESSFHVALQLI
EEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MESYREERRNSARVDMEGESVVIAVQSDVDTITKPAKAICIDLSRRGALLKCQQNMPLGT
CCCHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCE
LMTITFNANQDNENTVKGQVCRCARLNESSFHVALQLI
EEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA