| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is phhB
Identifier: 157961275
GI number: 157961275
Start: 1763267
End: 1763605
Strand: Direct
Name: phhB
Synonym: Spea_1449
Alternate gene names: NA
Gene position: 1763267-1763605 (Clockwise)
Preceding gene: 157961274
Following gene: 157961276
Centisome position: 34.08
GC content: 46.02
Gene sequence:
>339_bases ATGACTGAATTAGCGCAAATGAAATGTGAAGCATGCCAGGCGGATGCGCCAAAAGTGACCGATGAGGAGCTGGCACAGTT GATCGCCAAAATTCCTGACTGGGGTGTTGAGGTTCGCGGCGGCGTTATGCAGTTGGAGCGCGTCTATAAGTTTAAAAACT TTAAGTTAGCGATGGAGTTTACTAACAAGCTTGCCGACTTAGCCGAAGCCGATTTCCATCATCCCGGCATTTTAACTGAA TGGGGTAAGGTGACGGTAACTTGGTGGTCGCATTCAATAAAGGGTCTACATAAGAACGATTTTATCATGGCAGCCAAGAC TGACACGTTATTTCAATAA
Upstream 100 bases:
>100_bases CCAGCTAAAGCGGGTTAGCTAAATCGGAGAGCGAAAGCCGGTTTAGTATTAAAAATAGAGTAACTAATAGCGTATTAGTA GCAATAATTAAGGAAGAGAG
Downstream 100 bases:
>100_bases GCTTGTAGATCTTTAAAGGCTAAAAGTACTGTTATATTATGGAGTAATTACACTAAACCTCCAGCATTGCAGGCGTGTTA GTACAGCTGGCACGCTTTTA
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTELAQMKCEACQADAPKVTDEELAQLIAKIPDWGVEVRGGVMQLERVYKFKNFKLAMEFTNKLADLAEADFHHPGILTE WGKVTVTWWSHSIKGLHKNDFIMAAKTDTLFQ
Sequences:
>Translated_112_residues MTELAQMKCEACQADAPKVTDEELAQLIAKIPDWGVEVRGGVMQLERVYKFKNFKLAMEFTNKLADLAEADFHHPGILTE WGKVTVTWWSHSIKGLHKNDFIMAAKTDTLFQ >Mature_111_residues TELAQMKCEACQADAPKVTDEELAQLIAKIPDWGVEVRGGVMQLERVYKFKNFKLAMEFTNKLADLAEADFHHPGILTEW GKVTVTWWSHSIKGLHKNDFIMAAKTDTLFQ
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 12754; Mature: 12623
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELAQMKCEACQADAPKVTDEELAQLIAKIPDWGVEVRGGVMQLERVYKFKNFKLAMEF CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH TNKLADLAEADFHHPGILTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDTLFQ HHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure TELAQMKCEACQADAPKVTDEELAQLIAKIPDWGVEVRGGVMQLERVYKFKNFKLAMEF CHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH TNKLADLAEADFHHPGILTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDTLFQ HHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA