| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is phoB [H]
Identifier: 157961258
GI number: 157961258
Start: 1740608
End: 1741831
Strand: Reverse
Name: phoB [H]
Synonym: Spea_1432
Alternate gene names: 157961258
Gene position: 1741831-1740608 (Counterclockwise)
Preceding gene: 157961264
Following gene: 157961257
Centisome position: 33.66
GC content: 44.85
Gene sequence:
>1224_bases ATGCCTTTAACATTGAAGCTCATCAGCCAGCATAAAATCATCGTCGTAGAAGACTGCTATAGCGAGCGTTGTTTGCTACT GACTTTACTCGAGTCAATGGGGTTTACGGCTCAAGGTTTTTCTAATGCCCAAGAGGCCATAGAACTGCTTCAGCGTGAGC ATGTCGACATGGTGATCACCGATTGGATGATGCCTAAGATCAGCGGTATTGAGCTATGTAAAACTATAAAATCAATGCCT TGCTCGCCATATACCATATTACTCACGGGTAATAGCCAGAATGCTCATCTAATAGAAGGGATCGAATCTGGCGCCGATGA CTTTATTGCAAAGCCCTTTCATAGCGGCGTCCTGAAAGTAAGAATTCTTGCAGGCTTACGGATCATCGCGATGCAACAGA AATTAGAAAGTCACAATCAAGCGCTCAATAATATGCTGCTAAAAGAGCAAGGTTACCTTAATAATCTTAAACATGACCTG TCTCTCGCCGCTCAGCTGCAACGCGCTCTACTTCCCAAGAACTCAGATTTAAGCCAAGGCTGGCGAGTCACAACGGAATT TAAACCAGCCCAAGATCTCGCAGGCGATCTGTTCCAATGCTTCAATATCGACAAGCAGCATATCGGCTTTTACCTATTGG ATGTCAGCGGTCATGGTACGGCGGCATCGATGCTAAGCTTTACCCTAGCGCACCACTTATCTAGCAGCCAGCAAATTTGG CAGTCACTTGATTTGGCACAGATAACTAACAAACTCAATCGAGAGTTTGACGACCCAGAGCAGTGTGGACGCTTTGCAAC ACTACTTATTGGCATCGCAGACACTAACAGCGGAGAGGTTGAGATTATCAACGCTGGGCACCCCTCTCCTATCATAGTGG GCCCACAAGGCGCTAGATTTGTCGATGATAACCACCTTGGATCACAGCTACCAATTGGCATCAACAAACAGCACAGTTAC CACAGCCAACATTTCACCTTAGAGAAAGAAGAGCAGCTACTGCTCTATTCTGATGGCATTTATGAATGTCGCAACAGTAA ATTTGGTAGTTTTGGCTTAGCAAAACTACTGAAAAATATCAGTGATGCCAGAGAGCTACCTGCAGAAAAGTTATTGCACT ATCTCAGCTATAGCACTGAGCTTTGGCAAGAAAAACAAGCTCAGGACGATATCTCTCTGATGCTAATCTCAACCACAACT CACTTAGCCCATTGTGATTCTTAA
Upstream 100 bases:
>100_bases GAACCTAAAACAGAAATAAATATTTTCATTTGTCTGGCACAGAGTTTGCTTTATTACAAAGTACCCCTGAAACGACCGAT AACAAGAGGAGGCTATGACA
Downstream 100 bases:
>100_bases ATGTAAGGAAACACTATGAATAGCCTACAGTTTAACCTCGATAGAAATATTATGGCAAAACACTCCATAAGCAGAGAAAT AGAGCAATTTATGCTGCAAA
Product: response regulator receiver modulated serine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MPLTLKLISQHKIIVVEDCYSERCLLLTLLESMGFTAQGFSNAQEAIELLQREHVDMVITDWMMPKISGIELCKTIKSMP CSPYTILLTGNSQNAHLIEGIESGADDFIAKPFHSGVLKVRILAGLRIIAMQQKLESHNQALNNMLLKEQGYLNNLKHDL SLAAQLQRALLPKNSDLSQGWRVTTEFKPAQDLAGDLFQCFNIDKQHIGFYLLDVSGHGTAASMLSFTLAHHLSSSQQIW QSLDLAQITNKLNREFDDPEQCGRFATLLIGIADTNSGEVEIINAGHPSPIIVGPQGARFVDDNHLGSQLPIGINKQHSY HSQHFTLEKEEQLLLYSDGIYECRNSKFGSFGLAKLLKNISDARELPAEKLLHYLSYSTELWQEKQAQDDISLMLISTTT HLAHCDS
Sequences:
>Translated_407_residues MPLTLKLISQHKIIVVEDCYSERCLLLTLLESMGFTAQGFSNAQEAIELLQREHVDMVITDWMMPKISGIELCKTIKSMP CSPYTILLTGNSQNAHLIEGIESGADDFIAKPFHSGVLKVRILAGLRIIAMQQKLESHNQALNNMLLKEQGYLNNLKHDL SLAAQLQRALLPKNSDLSQGWRVTTEFKPAQDLAGDLFQCFNIDKQHIGFYLLDVSGHGTAASMLSFTLAHHLSSSQQIW QSLDLAQITNKLNREFDDPEQCGRFATLLIGIADTNSGEVEIINAGHPSPIIVGPQGARFVDDNHLGSQLPIGINKQHSY HSQHFTLEKEEQLLLYSDGIYECRNSKFGSFGLAKLLKNISDARELPAEKLLHYLSYSTELWQEKQAQDDISLMLISTTT HLAHCDS >Mature_406_residues PLTLKLISQHKIIVVEDCYSERCLLLTLLESMGFTAQGFSNAQEAIELLQREHVDMVITDWMMPKISGIELCKTIKSMPC SPYTILLTGNSQNAHLIEGIESGADDFIAKPFHSGVLKVRILAGLRIIAMQQKLESHNQALNNMLLKEQGYLNNLKHDLS LAAQLQRALLPKNSDLSQGWRVTTEFKPAQDLAGDLFQCFNIDKQHIGFYLLDVSGHGTAASMLSFTLAHHLSSSQQIWQ SLDLAQITNKLNREFDDPEQCGRFATLLIGIADTNSGEVEIINAGHPSPIIVGPQGARFVDDNHLGSQLPIGINKQHSYH SQHFTLEKEEQLLLYSDGIYECRNSKFGSFGLAKLLKNISDARELPAEKLLHYLSYSTELWQEKQAQDDISLMLISTTTH LAHCDS
Specific function: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by phoB and phoR when phosphate is limited [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=35.8974358974359, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786599, Length=138, Percent_Identity=32.6086956521739, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788550, Length=134, Percent_Identity=27.6119402985075, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790860, Length=123, Percent_Identity=29.2682926829268, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788191, Length=115, Percent_Identity=29.5652173913043, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR011879 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 45466; Mature: 45334
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTLKLISQHKIIVVEDCYSERCLLLTLLESMGFTAQGFSNAQEAIELLQREHVDMVIT CCEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEE DWMMPKISGIELCKTIKSMPCSPYTILLTGNSQNAHLIEGIESGADDFIAKPFHSGVLKV HHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHCHHHCCCEEE RILAGLRIIAMQQKLESHNQALNNMLLKEQGYLNNLKHDLSLAAQLQRALLPKNSDLSQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WRVTTEFKPAQDLAGDLFQCFNIDKQHIGFYLLDVSGHGTAASMLSFTLAHHLSSSQQIW CEEEECCCCHHHHHHHHHHHHCCCCHHCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHH QSLDLAQITNKLNREFDDPEQCGRFATLLIGIADTNSGEVEIINAGHPSPIIVGPQGARF HHCCHHHHHHHHCCCCCCHHHHHHHEEHEEEEECCCCCCEEEEECCCCCCEEECCCCCEE VDDNHLGSQLPIGINKQHSYHSQHFTLEKEEQLLLYSDGIYECRNSKFGSFGLAKLLKNI CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHH SDARELPAEKLLHYLSYSTELWQEKQAQDDISLMLISTTTHLAHCDS HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCC >Mature Secondary Structure PLTLKLISQHKIIVVEDCYSERCLLLTLLESMGFTAQGFSNAQEAIELLQREHVDMVIT CEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEE DWMMPKISGIELCKTIKSMPCSPYTILLTGNSQNAHLIEGIESGADDFIAKPFHSGVLKV HHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHCHHHCCCEEE RILAGLRIIAMQQKLESHNQALNNMLLKEQGYLNNLKHDLSLAAQLQRALLPKNSDLSQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WRVTTEFKPAQDLAGDLFQCFNIDKQHIGFYLLDVSGHGTAASMLSFTLAHHLSSSQQIW CEEEECCCCHHHHHHHHHHHHCCCCHHCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHH QSLDLAQITNKLNREFDDPEQCGRFATLLIGIADTNSGEVEIINAGHPSPIIVGPQGARF HHCCHHHHHHHHCCCCCCHHHHHHHEEHEEEEECCCCCCEEEEECCCCCCEEECCCCCEE VDDNHLGSQLPIGINKQHSYHSQHFTLEKEEQLLLYSDGIYECRNSKFGSFGLAKLLKNI CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHH SDARELPAEKLLHYLSYSTELWQEKQAQDDISLMLISTTTHLAHCDS HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]