| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fepE [C]
Identifier: 157961224
GI number: 157961224
Start: 1698048
End: 1699025
Strand: Direct
Name: fepE [C]
Synonym: Spea_1397
Alternate gene names: 157961224
Gene position: 1698048-1699025 (Clockwise)
Preceding gene: 157961223
Following gene: 157961225
Centisome position: 32.82
GC content: 43.25
Gene sequence:
>978_bases ATGAATAAGCAAGTACAACAAAATCACACAGACGCACAGTTTCCGCATATGAACCCCGTTCATAATCCGGTCGAAGATGA AATCGATCTTCGCGAACTCTTTTCAGTCATCTGGCAGGGCAAATGGCTAATCATTGCCATCACAGCTATTTTCGCTATTG GCTCCGTTATCTTCGCCCTAATGCAGCCAAATACCTATAAATCTGAGGCCTTACTTGCACCAGCAAGTGAAGAGCAAGGT GGTGGACTAAGCGCATTAGCAGGTCAGTTTGGGGGGCTTGCAAGCATGGCAGGCATAAACCTTGGCGGTGGTGGTGGTGT TGATAAGACTCAAATGGCTATAGAGGTGATGAAATCACGCCAATTCGCAAGTCAATTCATCCAAAGCCACAATATCTTGC CGGAGCTTATGGCTGCAGATAAGTGGGATATGGCAACTGATGCGCTTGTTTATGACAGCGAGCTTTATAACCCGCAAACT AAAACTTGGTTGCGTGAAGTAAAAGCGCCATTCAAGCCAGAACCTTCAATGCAAGAAGCATTTAAAGAGTTCACTAAAGT TATAGCGGTTAATTCTGCAAAAGATACTGGCATGGTCACAATCTCAGTTGAACATCTATCACCTAGCGTTGCACAGCAGT GGGTGACTTGGTTAGTCGAAGATATTAACAAGGTGATGAAAGAGCGAGATGTTACAGAAGCTCATCGCAGTAGTGAGTTT TTGGAAACTCAAATCGCTAAAACCAACGTAGCTGACATTCGTACTATTCTCTATCAACTTATTGAAGAGCAAACCAAGAC TATTATGTTTGCTGAAGTACGCGACGAATATGTATTTAAAACGATTGATCCAGCTTTAGTTCCTGAAGAAAAAGCTGGCC CTAAGCGTGCGTTGATATGCGTCTTAGGTACCATGCTTGGTGGCATGCTAGCCGTAATGATTGTCCTAATAAGACATTTT GTAAGGAAAGAAGATTAG
Upstream 100 bases:
>100_bases AACTTCAGCTGATTACAATATCAAACCTAACATCTAATTTTAAATTACATGCGGAACCTGCACCTAGGAACTAGAACCTA GGACCTAGGACCTTTATATA
Downstream 100 bases:
>100_bases GGCTCTTTCTCTTATAGTTTCTAGCAGCGAAGCGCTCTAGCATTCTAGAGTCTTCTTTGAAACTTAAACCTAAGGCTTCA AGGGAAGGCGCGCATTTAAG
Product: lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: Chain Length Determinant Protein; Lipopolysaccharide Biosynthesis; Chain Length Determinant Family Protein; OtnB Protein; O-Antigen Length Determinant Protein
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MNKQVQQNHTDAQFPHMNPVHNPVEDEIDLRELFSVIWQGKWLIIAITAIFAIGSVIFALMQPNTYKSEALLAPASEEQG GGLSALAGQFGGLASMAGINLGGGGGVDKTQMAIEVMKSRQFASQFIQSHNILPELMAADKWDMATDALVYDSELYNPQT KTWLREVKAPFKPEPSMQEAFKEFTKVIAVNSAKDTGMVTISVEHLSPSVAQQWVTWLVEDINKVMKERDVTEAHRSSEF LETQIAKTNVADIRTILYQLIEEQTKTIMFAEVRDEYVFKTIDPALVPEEKAGPKRALICVLGTMLGGMLAVMIVLIRHF VRKED
Sequences:
>Translated_325_residues MNKQVQQNHTDAQFPHMNPVHNPVEDEIDLRELFSVIWQGKWLIIAITAIFAIGSVIFALMQPNTYKSEALLAPASEEQG GGLSALAGQFGGLASMAGINLGGGGGVDKTQMAIEVMKSRQFASQFIQSHNILPELMAADKWDMATDALVYDSELYNPQT KTWLREVKAPFKPEPSMQEAFKEFTKVIAVNSAKDTGMVTISVEHLSPSVAQQWVTWLVEDINKVMKERDVTEAHRSSEF LETQIAKTNVADIRTILYQLIEEQTKTIMFAEVRDEYVFKTIDPALVPEEKAGPKRALICVLGTMLGGMLAVMIVLIRHF VRKED >Mature_325_residues MNKQVQQNHTDAQFPHMNPVHNPVEDEIDLRELFSVIWQGKWLIIAITAIFAIGSVIFALMQPNTYKSEALLAPASEEQG GGLSALAGQFGGLASMAGINLGGGGGVDKTQMAIEVMKSRQFASQFIQSHNILPELMAADKWDMATDALVYDSELYNPQT KTWLREVKAPFKPEPSMQEAFKEFTKVIAVNSAKDTGMVTISVEHLSPSVAQQWVTWLVEDINKVMKERDVTEAHRSSEF LETQIAKTNVADIRTILYQLIEEQTKTIMFAEVRDEYVFKTIDPALVPEEKAGPKRALICVLGTMLGGMLAVMIVLIRHF VRKED
Specific function: Part Of The Ferric Enterobactin Transport System. [C]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36225; Mature: 36225
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQVQQNHTDAQFPHMNPVHNPVEDEIDLRELFSVIWQGKWLIIAITAIFAIGSVIFAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MQPNTYKSEALLAPASEEQGGGLSALAGQFGGLASMAGINLGGGGGVDKTQMAIEVMKSR HCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH QFASQFIQSHNILPELMAADKWDMATDALVYDSELYNPQTKTWLREVKAPFKPEPSMQEA HHHHHHHHHCCCCHHHHHCCCCCCHHHHHEECHHHCCCHHHHHHHHHCCCCCCCCCHHHH FKEFTKVIAVNSAKDTGMVTISVEHLSPSVAQQWVTWLVEDINKVMKERDVTEAHRSSEF HHHHHHHHHCCCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETQIAKTNVADIRTILYQLIEEQTKTIMFAEVRDEYVFKTIDPALVPEEKAGPKRALIC HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VLGTMLGGMLAVMIVLIRHFVRKED HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKQVQQNHTDAQFPHMNPVHNPVEDEIDLRELFSVIWQGKWLIIAITAIFAIGSVIFAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MQPNTYKSEALLAPASEEQGGGLSALAGQFGGLASMAGINLGGGGGVDKTQMAIEVMKSR HCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH QFASQFIQSHNILPELMAADKWDMATDALVYDSELYNPQTKTWLREVKAPFKPEPSMQEA HHHHHHHHHCCCCHHHHHCCCCCCHHHHHEECHHHCCCHHHHHHHHHCCCCCCCCCHHHH FKEFTKVIAVNSAKDTGMVTISVEHLSPSVAQQWVTWLVEDINKVMKERDVTEAHRSSEF HHHHHHHHHCCCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETQIAKTNVADIRTILYQLIEEQTKTIMFAEVRDEYVFKTIDPALVPEEKAGPKRALIC HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VLGTMLGGMLAVMIVLIRHFVRKED HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA