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The map label for this gene is kpsD [H]

Identifier: 157961222

GI number: 157961222

Start: 1694703

End: 1697498

Strand: Direct

Name: kpsD [H]

Synonym: Spea_1395

Alternate gene names: 157961222

Gene position: 1694703-1697498 (Clockwise)

Preceding gene: 157961221

Following gene: 157961223

Centisome position: 32.75

GC content: 44.13

Gene sequence:

>2796_bases
GTGCTTAACAAGACTAAAAAATTCATCATTGCTGGTATGTCAGCGCTGATATTGCTATCAGGGCAGGCGAGTGCTATCAC
GCCTTCTCCACAAATGATGGAACAATTTAAAAATCTTCCAGCATCTGAGCAGCAACGCTTAGCTAAACAGTATGGTATCG
ATCCTTCAATGCTTGGCGGTGGCAGTAGCTCACAGCCACAGCTTGAAAATCCAAACTTAGTTAATCAACGCGCCCAGTAC
GACGAGAATGGTCAGTTAATTCAAACAGATCAGTTTGGTAATCCAGTTGATGCATTTGGCAAACCGCTAAAGGATAAGTC
CGATGAGCAACTTAAGTTCGAAGAAGATGCAGCTAAAAAAGAGTTAAAGCGTTTTGGCTATGACTTGTTTGCAGGCGAAC
CAACCACTTTTGCGCCAGTATCAGATGTCCCAGTACCGAGCGAATATTTAGTCGGCCCTGGCGACAACATAAAAGTACAG
CTTTTTGGCAAAGACAATAAAGAGTACGACCTTGTTATTAATCGTGAAGGTGTAATCCAATTTCCAGAGCTTGGTCCAAT
CACTGTTGCAGGGTTAACCTTTAGCGAACTGCGCGAAACCTTATCAGAGCGTATCAATCAGCAGATGATTGGTATTCAGT
CAAATATCACCATGGGTGAATTACGCTCAATCCGTATTTTTGTTGCGGGTGATGCCTACAAACCTGGTTCTTACACAGTA
TCTAGCCTTTCTACTATCACCCAAGCTTTGTTTGTAGCTGGTGGTGTAAACGAAATCGGTTCGCTACGAAATATTCAAGT
CAAACGTAACGGCAAGCTAGTCGGTAGTATGGACTTATATGATCTGCTACTTCGTGGTGATGCTTCTGGCGATATCAATT
TACGTTCTGGCGATGTGGTATTTATCCCTGCTGTAGGCGGCTTAGTCAGCGTAACTGGTGAAGTACGTCGCCCAGCCATC
TATGAGCTTAAAAAGCATGAAACAATGGCGCAAGTCATTGAGATGGCAGCAGGCATAAAGCCTGGTGCTTATCCAAGACG
CAGCAGCGTTGAACGTTTTAATGCAAATAGCCTTAAGACGATTCTAAATGTTGATTTAACTACTCAAGCTGGTAAAGCGA
CTAAAGCTGTTGCTGGCGATGTTATCCGTGTTAAAAGCGCGACAACGCAATATGAAGATGCAATCACTGTAGTGGGCGCC
GTTGTAAGACCAGGTAAATACCAGTGGTATCAAGGGCAGAAAGTCAGTGATTTGGTGCCTTCAATTTGGGGCGACTTATC
AGTGTCGGCCGACCTTGAATACGCAATCATCGTACGTGAAATCAATAAGCAAGGTGACATTCAGGTTTATCAATTCTCTC
CAGCAAAAGCTATTAACGGTAAGGTCGCTTCACAAGACTTAACTTTGCAGGCTCGAGATAAAGTTATCTTCTTTAACTTT
AGCGACCTAACTCAAAACCGTTATGAGCTAAATAAGCTAGTAAAAGATCGAGTTCAGAAGGTTCAGTCATTAGCGGGCAA
TTCATTAATTGGTAACGATCTGTTTGAAGCTGGGTTTTCACAATTAAACCAGAAAAAGTTTGCCGATCGCTCAGAACTAG
GTGGCGTGGCCATTAACAGTCAAGGCGTAGAGCAAGACCCAACAGCCAAAGCGATAAAAGGCGAAGTCAACAAGATGTTG
GTTAACCTGTTTGAAGACAGTGACCTAATCAAGCTAAGTGGTGAGATGAATCGTGGTGAATTACTTTACCCCATCATTAT
GAAGCTCAATAGCCAAGGGCGTGCAGGTAACGGTGTTGCCGCTGTTGCAGTTAACGGCCGAGTGAATAATCCAGGCATCT
ACCCACTAACAGTTAATGCACGTATTAAAGACCTGATCACTGCTGCTGGCGGACTGGAAGAAGGTGCCTATACGCCGCGT
GCAGAATTAACCAGTACCTATACAACGGTTGATGGTTCAGCGATTAAGCATACCAATATTGCTTTAGAAGCTGCACTGCA
AGGTGACGAAACCCAGAATATTGCAATCAAAGGTCGTGATATTTTAACCGTGATGACAACACCAGACTGGCAAGAGAATA
AGTCGGTTGAAATTCGCGGTGAAGTTAAGTTCCCTGGTACCTACAACATTCGCCGTGGTGAAACCCTAGCCGATGTATTA
AAGCGTGCTGGTGGTTTTACCGAATATGCCTATTTACCTTCTTCTGTATTTGTGCGCGAATCTGTGCGTCAACAAGAGCA
GTTAGAGATTAAAAAGTTGGCAGACCAACTACGCCGTGATATCGCCACTCGTGGTGTATCAAAAGACGGTAATGTTGTTA
ATTATACCGACGCTCAATTGATGTTAACCGACTTGGAAACAATCCAAGCGGTAGGGCGTTTGGTAGTTGATTTATCAGCT
ATATCTGTTGGTATTAAGCAGGCAGACCTCCAGCTAGAAGATCAAGACGTACTCTATATTCCATCAACTAAGCAGACTAT
TGCGGTTATGGGCGAAGTACAGCACGCAGCAACCCATAGATTTAAAGAAGGTCAAACTCTCGACCAATACTTAGCCATGT
CAGGTGGTGCAAGAGAACGCGCCGATGATGACAGAACCTATGTGATAAAGGCAGACGGTTCAGTAATGCTACCAAACCGT
TCTATCTGGTTCAGTAATGAGTCAAGCCTACAGCCAGGCGACACCATCATTGTGCCACTCGATACCGAGTACAAAGACAA
CCTAACACTTTGGACGCAAGTCACCAGTATCATCTACAACACAGCAGTAGCATTCGCCACAGTCGCAAATCTTTAA

Upstream 100 bases:

>100_bases
TAGGACCTCGAACCTAGGATCTTTTATTTAAACCTAGGACCTAGGACCTGTCTTTCACCTAGGACCTTTTCTGATTTTAA
CCCTCTCTCGGAGATTACTG

Downstream 100 bases:

>100_bases
AAATAAGGTTTGAGGAACAGCAGGTCCTAGGTCCTAAAACCTGGGCTTTAAAAGCAGCAGCCTAAACCTAATAGCCAAGG
ATGGTGTTCGGTGAAATTAT

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 931; Mature: 931

Protein sequence:

>931_residues
MLNKTKKFIIAGMSALILLSGQASAITPSPQMMEQFKNLPASEQQRLAKQYGIDPSMLGGGSSSQPQLENPNLVNQRAQY
DENGQLIQTDQFGNPVDAFGKPLKDKSDEQLKFEEDAAKKELKRFGYDLFAGEPTTFAPVSDVPVPSEYLVGPGDNIKVQ
LFGKDNKEYDLVINREGVIQFPELGPITVAGLTFSELRETLSERINQQMIGIQSNITMGELRSIRIFVAGDAYKPGSYTV
SSLSTITQALFVAGGVNEIGSLRNIQVKRNGKLVGSMDLYDLLLRGDASGDINLRSGDVVFIPAVGGLVSVTGEVRRPAI
YELKKHETMAQVIEMAAGIKPGAYPRRSSVERFNANSLKTILNVDLTTQAGKATKAVAGDVIRVKSATTQYEDAITVVGA
VVRPGKYQWYQGQKVSDLVPSIWGDLSVSADLEYAIIVREINKQGDIQVYQFSPAKAINGKVASQDLTLQARDKVIFFNF
SDLTQNRYELNKLVKDRVQKVQSLAGNSLIGNDLFEAGFSQLNQKKFADRSELGGVAINSQGVEQDPTAKAIKGEVNKML
VNLFEDSDLIKLSGEMNRGELLYPIIMKLNSQGRAGNGVAAVAVNGRVNNPGIYPLTVNARIKDLITAAGGLEEGAYTPR
AELTSTYTTVDGSAIKHTNIALEAALQGDETQNIAIKGRDILTVMTTPDWQENKSVEIRGEVKFPGTYNIRRGETLADVL
KRAGGFTEYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDIATRGVSKDGNVVNYTDAQLMLTDLETIQAVGRLVVDLSA
ISVGIKQADLQLEDQDVLYIPSTKQTIAVMGEVQHAATHRFKEGQTLDQYLAMSGGARERADDDRTYVIKADGSVMLPNR
SIWFSNESSLQPGDTIIVPLDTEYKDNLTLWTQVTSIIYNTAVAFATVANL

Sequences:

>Translated_931_residues
MLNKTKKFIIAGMSALILLSGQASAITPSPQMMEQFKNLPASEQQRLAKQYGIDPSMLGGGSSSQPQLENPNLVNQRAQY
DENGQLIQTDQFGNPVDAFGKPLKDKSDEQLKFEEDAAKKELKRFGYDLFAGEPTTFAPVSDVPVPSEYLVGPGDNIKVQ
LFGKDNKEYDLVINREGVIQFPELGPITVAGLTFSELRETLSERINQQMIGIQSNITMGELRSIRIFVAGDAYKPGSYTV
SSLSTITQALFVAGGVNEIGSLRNIQVKRNGKLVGSMDLYDLLLRGDASGDINLRSGDVVFIPAVGGLVSVTGEVRRPAI
YELKKHETMAQVIEMAAGIKPGAYPRRSSVERFNANSLKTILNVDLTTQAGKATKAVAGDVIRVKSATTQYEDAITVVGA
VVRPGKYQWYQGQKVSDLVPSIWGDLSVSADLEYAIIVREINKQGDIQVYQFSPAKAINGKVASQDLTLQARDKVIFFNF
SDLTQNRYELNKLVKDRVQKVQSLAGNSLIGNDLFEAGFSQLNQKKFADRSELGGVAINSQGVEQDPTAKAIKGEVNKML
VNLFEDSDLIKLSGEMNRGELLYPIIMKLNSQGRAGNGVAAVAVNGRVNNPGIYPLTVNARIKDLITAAGGLEEGAYTPR
AELTSTYTTVDGSAIKHTNIALEAALQGDETQNIAIKGRDILTVMTTPDWQENKSVEIRGEVKFPGTYNIRRGETLADVL
KRAGGFTEYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDIATRGVSKDGNVVNYTDAQLMLTDLETIQAVGRLVVDLSA
ISVGIKQADLQLEDQDVLYIPSTKQTIAVMGEVQHAATHRFKEGQTLDQYLAMSGGARERADDDRTYVIKADGSVMLPNR
SIWFSNESSLQPGDTIIVPLDTEYKDNLTLWTQVTSIIYNTAVAFATVANL
>Mature_931_residues
MLNKTKKFIIAGMSALILLSGQASAITPSPQMMEQFKNLPASEQQRLAKQYGIDPSMLGGGSSSQPQLENPNLVNQRAQY
DENGQLIQTDQFGNPVDAFGKPLKDKSDEQLKFEEDAAKKELKRFGYDLFAGEPTTFAPVSDVPVPSEYLVGPGDNIKVQ
LFGKDNKEYDLVINREGVIQFPELGPITVAGLTFSELRETLSERINQQMIGIQSNITMGELRSIRIFVAGDAYKPGSYTV
SSLSTITQALFVAGGVNEIGSLRNIQVKRNGKLVGSMDLYDLLLRGDASGDINLRSGDVVFIPAVGGLVSVTGEVRRPAI
YELKKHETMAQVIEMAAGIKPGAYPRRSSVERFNANSLKTILNVDLTTQAGKATKAVAGDVIRVKSATTQYEDAITVVGA
VVRPGKYQWYQGQKVSDLVPSIWGDLSVSADLEYAIIVREINKQGDIQVYQFSPAKAINGKVASQDLTLQARDKVIFFNF
SDLTQNRYELNKLVKDRVQKVQSLAGNSLIGNDLFEAGFSQLNQKKFADRSELGGVAINSQGVEQDPTAKAIKGEVNKML
VNLFEDSDLIKLSGEMNRGELLYPIIMKLNSQGRAGNGVAAVAVNGRVNNPGIYPLTVNARIKDLITAAGGLEEGAYTPR
AELTSTYTTVDGSAIKHTNIALEAALQGDETQNIAIKGRDILTVMTTPDWQENKSVEIRGEVKFPGTYNIRRGETLADVL
KRAGGFTEYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDIATRGVSKDGNVVNYTDAQLMLTDLETIQAVGRLVVDLSA
ISVGIKQADLQLEDQDVLYIPSTKQTIAVMGEVQHAATHRFKEGQTLDQYLAMSGGARERADDDRTYVIKADGSVMLPNR
SIWFSNESSLQPGDTIIVPLDTEYKDNLTLWTQVTSIIYNTAVAFATVANL

Specific function: Involved in the translocation of the polysialic acid capsule across the outer membrane to the cell surface. May function as the periplasmic binding element of the PSA transport system, in which it transiently interacts with the membrane component of the t

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli K5 kpsD [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=206, Percent_Identity=28.1553398058252, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1788376, Length=206, Percent_Identity=24.2718446601942, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 101771; Mature: 101771

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKTKKFIIAGMSALILLSGQASAITPSPQMMEQFKNLPASEQQRLAKQYGIDPSMLGG
CCCCHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCC
GSSSQPQLENPNLVNQRAQYDENGQLIQTDQFGNPVDAFGKPLKDKSDEQLKFEEDAAKK
CCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCEEEHHHHHHH
ELKRFGYDLFAGEPTTFAPVSDVPVPSEYLVGPGDNIKVQLFGKDNKEYDLVINREGVIQ
HHHHCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEEECCCCCEE
FPELGPITVAGLTFSELRETLSERINQQMIGIQSNITMGELRSIRIFVAGDAYKPGSYTV
CCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEEEEEECCCCCCCCEEH
SSLSTITQALFVAGGVNEIGSLRNIQVKRNGKLVGSMDLYDLLLRGDASGDINLRSGDVV
HHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCEEECCHHHHHHHCCCCCCCEEEECCCEE
FIPAVGGLVSVTGEVRRPAIYELKKHETMAQVIEMAAGIKPGAYPRRSSVERFNANSLKT
EEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEE
ILNVDLTTQAGKATKAVAGDVIRVKSATTQYEDAITVVGAVVRPGKYQWYQGQKVSDLVP
EEEEEEECCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
SIWGDLSVSADLEYAIIVREINKQGDIQVYQFSPAKAINGKVASQDLTLQARDKVIFFNF
HHHCCCEECCCCEEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCEEEEECCEEEEEEC
SDLTQNRYELNKLVKDRVQKVQSLAGNSLIGNDLFEAGFSQLNQKKFADRSELGGVAINS
HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCEEECC
QGVEQDPTAKAIKGEVNKMLVNLFEDSDLIKLSGEMNRGELLYPIIMKLNSQGRAGNGVA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEHEEECCCCCCCCCEE
AVAVNGRVNNPGIYPLTVNARIKDLITAAGGLEEGAYTPRAELTSTYTTVDGSAIKHTNI
EEEECCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCHHHCEEEEECCCCCEEECCE
ALEAALQGDETQNIAIKGRDILTVMTTPDWQENKSVEIRGEVKFPGTYNIRRGETLADVL
EEEEEECCCCCCEEEEECCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHH
KRAGGFTEYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDIATRGVSKDGNVVNYTDAQL
HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEE
MLTDLETIQAVGRLVVDLSAISVGIKQADLQLEDQDVLYIPSTKQTIAVMGEVQHAATHR
EEHHHHHHHHHHHHHHHHHHHHHCEECCCCEECCCCEEEECCCCCEEHHHHHHHHHHHHH
FKEGQTLDQYLAMSGGARERADDDRTYVIKADGSVMLPNRSIWFSNESSLQPGDTIIVPL
CCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEECCCCEEEECCCCCCCCCCEEEEEC
DTEYKDNLTLWTQVTSIIYNTAVAFATVANL
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNKTKKFIIAGMSALILLSGQASAITPSPQMMEQFKNLPASEQQRLAKQYGIDPSMLGG
CCCCHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCC
GSSSQPQLENPNLVNQRAQYDENGQLIQTDQFGNPVDAFGKPLKDKSDEQLKFEEDAAKK
CCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCEEEHHHHHHH
ELKRFGYDLFAGEPTTFAPVSDVPVPSEYLVGPGDNIKVQLFGKDNKEYDLVINREGVIQ
HHHHCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEEECCCCCEE
FPELGPITVAGLTFSELRETLSERINQQMIGIQSNITMGELRSIRIFVAGDAYKPGSYTV
CCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEEEEEECCCCCCCCEEH
SSLSTITQALFVAGGVNEIGSLRNIQVKRNGKLVGSMDLYDLLLRGDASGDINLRSGDVV
HHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCEEECCHHHHHHHCCCCCCCEEEECCCEE
FIPAVGGLVSVTGEVRRPAIYELKKHETMAQVIEMAAGIKPGAYPRRSSVERFNANSLKT
EEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEE
ILNVDLTTQAGKATKAVAGDVIRVKSATTQYEDAITVVGAVVRPGKYQWYQGQKVSDLVP
EEEEEEECCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
SIWGDLSVSADLEYAIIVREINKQGDIQVYQFSPAKAINGKVASQDLTLQARDKVIFFNF
HHHCCCEECCCCEEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCEEEEECCEEEEEEC
SDLTQNRYELNKLVKDRVQKVQSLAGNSLIGNDLFEAGFSQLNQKKFADRSELGGVAINS
HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCEEECC
QGVEQDPTAKAIKGEVNKMLVNLFEDSDLIKLSGEMNRGELLYPIIMKLNSQGRAGNGVA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEHEEECCCCCCCCCEE
AVAVNGRVNNPGIYPLTVNARIKDLITAAGGLEEGAYTPRAELTSTYTTVDGSAIKHTNI
EEEECCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCHHHCEEEEECCCCCEEECCE
ALEAALQGDETQNIAIKGRDILTVMTTPDWQENKSVEIRGEVKFPGTYNIRRGETLADVL
EEEEEECCCCCCEEEEECCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHH
KRAGGFTEYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDIATRGVSKDGNVVNYTDAQL
HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEE
MLTDLETIQAVGRLVVDLSAISVGIKQADLQLEDQDVLYIPSTKQTIAVMGEVQHAATHR
EEHHHHHHHHHHHHHHHHHHHHHCEECCCCEECCCCEEEECCCCCEEHHHHHHHHHHHHH
FKEGQTLDQYLAMSGGARERADDDRTYVIKADGSVMLPNRSIWFSNESSLQPGDTIIVPL
CCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEECCCCEEEECCCCCCCCCCEEEEEC
DTEYKDNLTLWTQVTSIIYNTAVAFATVANL
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8021185 [H]