Click here to switch to the map view.

The map label for this gene is ylqH [H]

Identifier: 157961216

GI number: 157961216

Start: 1685881

End: 1686189

Strand: Reverse

Name: ylqH [H]

Synonym: Spea_1388

Alternate gene names: 157961216

Gene position: 1686189-1685881 (Counterclockwise)

Preceding gene: 157961217

Following gene: 157961165

Centisome position: 32.59

GC content: 47.9

Gene sequence:

>309_bases
ATGACTGAAACAGAGAACCCCAAAAAGGCTGTTGCGCTCAGCTATCAGCCAGGGACCGCACCCAAAGTCTCGGCTAAGGG
TGAAGATAGACTGGCAGAGGAAATCATCGCCTTAGCGCAGCAAGCCGGGATCCCGATACATCAAGATGAGTACTTATGTG
ATTTTTTGCAGCGTTTAGAAGTCGGAGACGAGATCCCAAGTGAGCTCTACCTGCTCATCGCTGAACTCATTGCTTTTGTG
TATGTGCTAGACGGTAAGTTTCCTGAAAAGTGGAACAATATGCATCAGAAGATTATGGAAGAGGCGTAG

Upstream 100 bases:

>100_bases
TTAATACAAAAACGGAGAGCGTTCCTGCTAGCATCTTGCCAGGAGAGCACTACTTGGTGAAGATAGATGTATAGTGAAGA
GCGATTGAAAGGGAGAAAAG

Downstream 100 bases:

>100_bases
AGCTAGGAAGGACGCTGCGCTGCGAGGTAAAAGCGAAGAAAGGTCCTAGGTCCTAGGTGAAAGCTAAGATGGGAAAGCAG
GGACGAACAAGCTAAGACGA

Product: FlhB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MTETENPKKAVALSYQPGTAPKVSAKGEDRLAEEIIALAQQAGIPIHQDEYLCDFLQRLEVGDEIPSELYLLIAELIAFV
YVLDGKFPEKWNNMHQKIMEEA

Sequences:

>Translated_102_residues
MTETENPKKAVALSYQPGTAPKVSAKGEDRLAEEIIALAQQAGIPIHQDEYLCDFLQRLEVGDEIPSELYLLIAELIAFV
YVLDGKFPEKWNNMHQKIMEEA
>Mature_101_residues
TETENPKKAVALSYQPGTAPKVSAKGEDRLAEEIIALAQQAGIPIHQDEYLCDFLQRLEVGDEIPSELYLLIAELIAFVY
VLDGKFPEKWNNMHQKIMEEA

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 11504; Mature: 11373

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETENPKKAVALSYQPGTAPKVSAKGEDRLAEEIIALAQQAGIPIHQDEYLCDFLQRLE
CCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VGDEIPSELYLLIAELIAFVYVLDGKFPEKWNNMHQKIMEEA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TETENPKKAVALSYQPGTAPKVSAKGEDRLAEEIIALAQQAGIPIHQDEYLCDFLQRLE
CCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VGDEIPSELYLLIAELIAFVYVLDGKFPEKWNNMHQKIMEEA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]