| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is flgA
Identifier: 157961165
GI number: 157961165
Start: 1631493
End: 1632266
Strand: Reverse
Name: flgA
Synonym: Spea_1337
Alternate gene names: NA
Gene position: 1632266-1631493 (Counterclockwise)
Preceding gene: 157961216
Following gene: 157961164
Centisome position: 31.54
GC content: 43.8
Gene sequence:
>774_bases ATGACTGCGGTCCAACACATCCCCAAATATACGCGCATTCTAGCGAATCAAGCTACTGCATTCATTATAAAAGCTTTTAT TGGCTCGTTTTTCATCATACTTGTGATGCCAACTCTAGCACTTGCAGCTGAACCTGCCAGTATTCCTTCTATATCGACCA TATCTCGATTAGCTATAGCCGCAGTAGAACAAAAAATAGAGGCTCCTGAAAAAGCTCGGATAAATATCACTCCGCAAAGT CTAGATACCCGAGTCAATTTACCTAATTGTTACCTGCCAATTAAAGCAGAGATAGCCAGTGACCGCGCTATCCGCCGTAA CAATACCGTTAGAATTAGCTGTAACAGCCCTGATTTAAGCTACCCATGGCAGATTTTTCTCTCGGTTCGAGTCGATATCC TCTATCCCATCGTTGTGGCAAAGTCGACCATGGGCCCCGGAGACTTGCTCGCTCGCGGTGATATTGAGATCGAATATATC GAGCAGAGCAATCTTCGCGGTCAGCAATTTGAGGAGATATCTCAAGTTGTAGGTGCAAGACTAAAAAGACGTGTCGCACC GGGACAGCCTATTTTTGCTAATCAACTCTGTATCGTTTGCAAGGGCGACAGTGTATCGATATATGCACGTTCTGAAAATT TTGAGATTAAAACCGTCGGTGAAGCACTGCATGATGGTAACGTTGGCGATAAAATTCGGATTAAAAATAGTCATTCACAT AAAAAACTCGATGCACGTGTCACTGGCGTTGGCCAAGTCGAAGTAAGAATGTAA
Upstream 100 bases:
>100_bases TTCCTTTTTAGGCATACTACTTGCTTAACTAAGGCATATCTGAGTTAAACAAAGCAATTTCAGTCAAACTAATGACGCCC ACCGATGCAAAAGGATAGAG
Downstream 100 bases:
>100_bases AATGTAAGAGTGTATGAATGAAAAAATCCTAAAGTATTGAGTCATGCTGCCGATAGCATGTGTAATAAACTCTCTTTATT AACTGTTGGATCTCAAAATG
Product: flagellar basal body P-ring biosynthesis protein FlgA
Products: NA
Alternate protein names: Flagella Basal Body P-Ring Formation Protein FlgA; Flagellar Basal-Body P-Ring Formation Protein FlgA; Flagellar Basal Body P-Ring Biosynthesis Protein; Flageller Protein FlgA; Flagellar Biosynthesis; SAF Domain-Containing Protein; Flagellar Protein; Flagellar Basal Body P-Ring Biosynthesis Protein-Like
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTAVQHIPKYTRILANQATAFIIKAFIGSFFIILVMPTLALAAEPASIPSISTISRLAIAAVEQKIEAPEKARINITPQS LDTRVNLPNCYLPIKAEIASDRAIRRNNTVRISCNSPDLSYPWQIFLSVRVDILYPIVVAKSTMGPGDLLARGDIEIEYI EQSNLRGQQFEEISQVVGARLKRRVAPGQPIFANQLCIVCKGDSVSIYARSENFEIKTVGEALHDGNVGDKIRIKNSHSH KKLDARVTGVGQVEVRM
Sequences:
>Translated_257_residues MTAVQHIPKYTRILANQATAFIIKAFIGSFFIILVMPTLALAAEPASIPSISTISRLAIAAVEQKIEAPEKARINITPQS LDTRVNLPNCYLPIKAEIASDRAIRRNNTVRISCNSPDLSYPWQIFLSVRVDILYPIVVAKSTMGPGDLLARGDIEIEYI EQSNLRGQQFEEISQVVGARLKRRVAPGQPIFANQLCIVCKGDSVSIYARSENFEIKTVGEALHDGNVGDKIRIKNSHSH KKLDARVTGVGQVEVRM >Mature_256_residues TAVQHIPKYTRILANQATAFIIKAFIGSFFIILVMPTLALAAEPASIPSISTISRLAIAAVEQKIEAPEKARINITPQSL DTRVNLPNCYLPIKAEIASDRAIRRNNTVRISCNSPDLSYPWQIFLSVRVDILYPIVVAKSTMGPGDLLARGDIEIEYIE QSNLRGQQFEEISQVVGARLKRRVAPGQPIFANQLCIVCKGDSVSIYARSENFEIKTVGEALHDGNVGDKIRIKNSHSHK KLDARVTGVGQVEVRM
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28362; Mature: 28231
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVQHIPKYTRILANQATAFIIKAFIGSFFIILVMPTLALAAEPASIPSISTISRLAIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AVEQKIEAPEKARINITPQSLDTRVNLPNCYLPIKAEIASDRAIRRNNTVRISCNSPDLS HHHHHHCCCCCCEEEECHHCCCCEECCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCC YPWQIFLSVRVDILYPIVVAKSTMGPGDLLARGDIEIEYIEQSNLRGQQFEEISQVVGAR CCEEEEEEEHHHHHEEEEEEECCCCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHH LKRRVAPGQPIFANQLCIVCKGDSVSIYARSENFEIKTVGEALHDGNVGDKIRIKNSHSH HHHHCCCCCCEECCCEEEEEECCCEEEEEECCCCEEEEHHHHHHCCCCCCEEEEECCCCC KKLDARVTGVGQVEVRM CEEEEEEECCEEEEEEC >Mature Secondary Structure TAVQHIPKYTRILANQATAFIIKAFIGSFFIILVMPTLALAAEPASIPSISTISRLAIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AVEQKIEAPEKARINITPQSLDTRVNLPNCYLPIKAEIASDRAIRRNNTVRISCNSPDLS HHHHHHCCCCCCEEEECHHCCCCEECCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCC YPWQIFLSVRVDILYPIVVAKSTMGPGDLLARGDIEIEYIEQSNLRGQQFEEISQVVGAR CCEEEEEEEHHHHHEEEEEEECCCCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHH LKRRVAPGQPIFANQLCIVCKGDSVSIYARSENFEIKTVGEALHDGNVGDKIRIKNSHSH HHHHCCCCCCEECCCEEEEEECCCEEEEEECCCCEEEEHHHHHHCCCCCCEEEEECCCCC KKLDARVTGVGQVEVRM CEEEEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA