| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961162
Identifier: 157961162
GI number: 157961162
Start: 1629722
End: 1630168
Strand: Direct
Name: 157961162
Synonym: Spea_1334
Alternate gene names: NA
Gene position: 1629722-1630168 (Clockwise)
Preceding gene: 157961161
Following gene: 157961166
Centisome position: 31.49
GC content: 49.44
Gene sequence:
>447_bases ATGAAGGCCGTTATCTTATTTGCTGCGTTAGCACTTAGCGCATGCTCTGCGCAAGACAGGTATGTGCAATACGAAACCGA GGCTCCTAGCTCTTTCCCTAAATTGACTGCCATAGGTTATGCACCACTGGATACTCAGCCAGCAACAGAGCAATCCCAGC GGGTATTAATGGCAATGCAGGCATCAAAGATTGCCGCTTACCGTGAACTTGCTGAGCAGGTCTATGGTCAGCAACTTAGC GCTACTAGCCAGGTTCGAGATTGGATGTTGGCGGCGGATGAAATTCAGGCATCAGTGTCAGGTGTGATCCGCGGTGCTAA GGTCGTGAAGAGTTATCCCGCAGGCGAGCACTATGTGACAGAGCTTGAGCTGGATTTCGAACAGGTGTGGGCGCTGTATC AGCAGCAAAATCGCTCACAAAGAGTCAAAGAGATTACGTATTTTTAA
Upstream 100 bases:
>100_bases CTACATCAGCCATTCTGAAAAAGTCGTTTCACAAAATGGCTTACTCTATAGGGATGCACAAGCTGGTCAGCACACAGTTC AATTAGTAGGGGATAAATAG
Downstream 100 bases:
>100_bases GGCTGAGAAGGGCGCTTCGCTTCTAGGAGCTAGGGCGTTCGCAGGCTCACTTTTTGATTCTAGGACGTTCGCTGGCTCAC TTCGAGGACCTAGGGCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKAVILFAALALSACSAQDRYVQYETEAPSSFPKLTAIGYAPLDTQPATEQSQRVLMAMQASKIAAYRELAEQVYGQQLS ATSQVRDWMLAADEIQASVSGVIRGAKVVKSYPAGEHYVTELELDFEQVWALYQQQNRSQRVKEITYF
Sequences:
>Translated_148_residues MKAVILFAALALSACSAQDRYVQYETEAPSSFPKLTAIGYAPLDTQPATEQSQRVLMAMQASKIAAYRELAEQVYGQQLS ATSQVRDWMLAADEIQASVSGVIRGAKVVKSYPAGEHYVTELELDFEQVWALYQQQNRSQRVKEITYF >Mature_148_residues MKAVILFAALALSACSAQDRYVQYETEAPSSFPKLTAIGYAPLDTQPATEQSQRVLMAMQASKIAAYRELAEQVYGQQLS ATSQVRDWMLAADEIQASVSGVIRGAKVVKSYPAGEHYVTELELDFEQVWALYQQQNRSQRVKEITYF
Specific function: Unknown
COG id: COG3018
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16549; Mature: 16549
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVILFAALALSACSAQDRYVQYETEAPSSFPKLTAIGYAPLDTQPATEQSQRVLMAMQ CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH ASKIAAYRELAEQVYGQQLSATSQVRDWMLAADEIQASVSGVIRGAKVVKSYPAGEHYVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE ELELDFEQVWALYQQQNRSQRVKEITYF EEECCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKAVILFAALALSACSAQDRYVQYETEAPSSFPKLTAIGYAPLDTQPATEQSQRVLMAMQ CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH ASKIAAYRELAEQVYGQQLSATSQVRDWMLAADEIQASVSGVIRGAKVVKSYPAGEHYVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE ELELDFEQVWALYQQQNRSQRVKEITYF EEECCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA