| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is kefC [H]
Identifier: 157961053
GI number: 157961053
Start: 1489454
End: 1491382
Strand: Reverse
Name: kefC [H]
Synonym: Spea_1225
Alternate gene names: 157961053
Gene position: 1491382-1489454 (Counterclockwise)
Preceding gene: 157961054
Following gene: 157961051
Centisome position: 28.82
GC content: 48.42
Gene sequence:
>1929_bases ATGACTGCTTATTTTATTCAAGCTTTTATCTATTTATGCGCCGCCGTCATCGCCGTGCCTATTGCTAAGCGGCTCGGCCT AGGCTCAGTGCTGGGCTATTTAATGGCAGGGGTAGTAATAGGGCCTATTATTGGTCTGGTCGGTGCCGAAACCAACACAC TGCAGCACTTTGCCGAATTTGGCGTGGTGATGATGCTATTCCTAGTAGGTCTCGAACTTGAGCCCAAGATGCTCTGGAAT ATGCGCAATAAACTTATTGGTTTAGGTGGACTTCAAGTAGGACTCTCTACCTTAGTGGTGATGGGTATCGCCCTGAGTTT CGGCTATGGCTGGAGTATCGCCCTCACGGTGGGAATGATTTTCTCGCTGTCATCGACCGCTATCGTACTGCAGACCTTCA ATGAGAAGAGTCTAACCAAAACCGAAGGCGGAAAGAATGCCTTTTCGGTGCTGTTATTTCAAGATATCGCCGTGATCCCT ATGCTGGCGTTTATCCCGCTCTTGGCCTTGCCTGAACTCGTCGAAAAAGCTCAGTCTGTCACCCAAAGTGCTGCAGAGCA CCATGAGGAGCTTTCGCTCGTCGCAGGTCTGCCGGGCTGGGCTTACGGAGTGGTCGTCTTGATGGCCATCGCTAGCGTCG TGATTGGCGGTCATTATTTGAGTCGTCCGCTATTTCGCTATGTCGCCAGCTCAGGACTTAGGGAGATCTTTACTGCCACC GCGCTTATGCTGGTTATTGGTATTGCTGCACTCATGAGCCTCGTAGGGCTATCTCCCGCACTAGGCACCTTCCTTGCGGG CGTTGTATTGGCAAACAGTGAGTTTAGACACGAGCTTGAGTCCAATATCGAGCCTTTCAAGGGGCTATTACTCGGGTTAT TTTTTATTACCGTGGGCGCAGGCATCAACTTCGATGTGCTGCTCAGTAATATCGGCCCAGTGATGGCAATGACCCTTGGG GTCATTCTGATTAAGGCCGCTGTATTACTGGTACTGGCCTTTATTTTTAAGATCAGGGGCAGTGACCGTTGGCTATTTGC CTTGAGCCTAGCGCAAGCGGGTGAGTTTGGTTTCGTGCTACTGAGTTACACAGTGCAAAACCATGTGATCCCTACCGAGC TTGCTCAGTTACTGTCACTAGTGGTTGCCATATCCATGTTCCTCACACCAGGCCTATTCATTCTGTTTGATAAAGTCATT TTACCCCGCTATGAAAAAACAGAAAATACACGAGAGCCTGATGATATCGACGAGACAGGCACTGTGATTATTGCCGGAGT CGGCCGCTTTGGGCAGATAGTTAATCGCCTGCTGGTGACCAATGGTGTTAAAACAGTCGTACTGGATCATGAAGTTCAGC AAATCGAAAACTTAAGGAAAATCAATACAAAAAGCTATTACGGCGATGCCACTCAGCCCGACTTACTCCATACTGCAGGT ATCGAGCAGGCTAAGATGCTTGTCATTGCCATAGATGATCCTGAACGAGCCGTAGGTTTAGTCGAATATATCAAGCATAC CCATCCCCATGTGATCGTGATGGCTCGCGCCTTTGATCGAAGGCACCTGTATCGTCTTCGTAATGCGGGGGCTGACTTTA TGGTAAGCGAGACCTTCCATTCGGCGCTCAATTTAGGTAAGCATGCACTGATAAAACTTGGCGTACACCCGTTTAAGGCC GAGCAACAGCGTGCAACTTTCTATGAGACCGAAACGACTCATAAAGACACTCTGTATGAGGCTTGGAAACAGTTCACCGA AGACGATAAATACCTAGTACATTATCGCGATATGTTTATCCAGCTTGAAGAAACTCTAAGCGAAGCGATGAAAGACGAGC GTTATCGCAGCTTTTCAAAAGTGGAGCGCAGCTGGACGCCACCTCCTAAGGAAAATCATACTGAATTTTCTAAAGCTGAA AGCGATTAA
Upstream 100 bases:
>100_bases CACTCAAGGCACTTAGTGAGGACAGATTCGATATCGAACAGGCTCAATCCCTTGAAAAACTCAATGGTCACCTCGACCAA TTGATCCGGGAGCACTAATT
Downstream 100 bases:
>100_bases CCAGGAACAATATCCAATAGAAAACGGTCAAAAAAAGCCCCCGTCACCGTTAGGTAGCGGGGGCTTATTATCTATTGTCT AATGACAAGAATCGATCTTG
Product: potassium efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 642; Mature: 641
Protein sequence:
>642_residues MTAYFIQAFIYLCAAVIAVPIAKRLGLGSVLGYLMAGVVIGPIIGLVGAETNTLQHFAEFGVVMMLFLVGLELEPKMLWN MRNKLIGLGGLQVGLSTLVVMGIALSFGYGWSIALTVGMIFSLSSTAIVLQTFNEKSLTKTEGGKNAFSVLLFQDIAVIP MLAFIPLLALPELVEKAQSVTQSAAEHHEELSLVAGLPGWAYGVVVLMAIASVVIGGHYLSRPLFRYVASSGLREIFTAT ALMLVIGIAALMSLVGLSPALGTFLAGVVLANSEFRHELESNIEPFKGLLLGLFFITVGAGINFDVLLSNIGPVMAMTLG VILIKAAVLLVLAFIFKIRGSDRWLFALSLAQAGEFGFVLLSYTVQNHVIPTELAQLLSLVVAISMFLTPGLFILFDKVI LPRYEKTENTREPDDIDETGTVIIAGVGRFGQIVNRLLVTNGVKTVVLDHEVQQIENLRKINTKSYYGDATQPDLLHTAG IEQAKMLVIAIDDPERAVGLVEYIKHTHPHVIVMARAFDRRHLYRLRNAGADFMVSETFHSALNLGKHALIKLGVHPFKA EQQRATFYETETTHKDTLYEAWKQFTEDDKYLVHYRDMFIQLEETLSEAMKDERYRSFSKVERSWTPPPKENHTEFSKAE SD
Sequences:
>Translated_642_residues MTAYFIQAFIYLCAAVIAVPIAKRLGLGSVLGYLMAGVVIGPIIGLVGAETNTLQHFAEFGVVMMLFLVGLELEPKMLWN MRNKLIGLGGLQVGLSTLVVMGIALSFGYGWSIALTVGMIFSLSSTAIVLQTFNEKSLTKTEGGKNAFSVLLFQDIAVIP MLAFIPLLALPELVEKAQSVTQSAAEHHEELSLVAGLPGWAYGVVVLMAIASVVIGGHYLSRPLFRYVASSGLREIFTAT ALMLVIGIAALMSLVGLSPALGTFLAGVVLANSEFRHELESNIEPFKGLLLGLFFITVGAGINFDVLLSNIGPVMAMTLG VILIKAAVLLVLAFIFKIRGSDRWLFALSLAQAGEFGFVLLSYTVQNHVIPTELAQLLSLVVAISMFLTPGLFILFDKVI LPRYEKTENTREPDDIDETGTVIIAGVGRFGQIVNRLLVTNGVKTVVLDHEVQQIENLRKINTKSYYGDATQPDLLHTAG IEQAKMLVIAIDDPERAVGLVEYIKHTHPHVIVMARAFDRRHLYRLRNAGADFMVSETFHSALNLGKHALIKLGVHPFKA EQQRATFYETETTHKDTLYEAWKQFTEDDKYLVHYRDMFIQLEETLSEAMKDERYRSFSKVERSWTPPPKENHTEFSKAE SD >Mature_641_residues TAYFIQAFIYLCAAVIAVPIAKRLGLGSVLGYLMAGVVIGPIIGLVGAETNTLQHFAEFGVVMMLFLVGLELEPKMLWNM RNKLIGLGGLQVGLSTLVVMGIALSFGYGWSIALTVGMIFSLSSTAIVLQTFNEKSLTKTEGGKNAFSVLLFQDIAVIPM LAFIPLLALPELVEKAQSVTQSAAEHHEELSLVAGLPGWAYGVVVLMAIASVVIGGHYLSRPLFRYVASSGLREIFTATA LMLVIGIAALMSLVGLSPALGTFLAGVVLANSEFRHELESNIEPFKGLLLGLFFITVGAGINFDVLLSNIGPVMAMTLGV ILIKAAVLLVLAFIFKIRGSDRWLFALSLAQAGEFGFVLLSYTVQNHVIPTELAQLLSLVVAISMFLTPGLFILFDKVIL PRYEKTENTREPDDIDETGTVIIAGVGRFGQIVNRLLVTNGVKTVVLDHEVQQIENLRKINTKSYYGDATQPDLLHTAGI EQAKMLVIAIDDPERAVGLVEYIKHTHPHVIVMARAFDRRHLYRLRNAGADFMVSETFHSALNLGKHALIKLGVHPFKAE QQRATFYETETTHKDTLYEAWKQFTEDDKYLVHYRDMFIQLEETLSEAMKDERYRSFSKVERSWTPPPKENHTEFSKAES D
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=423, Percent_Identity=27.8959810874704, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1786232, Length=632, Percent_Identity=43.5126582278481, Blast_Score=465, Evalue=1e-132, Organism=Escherichia coli, GI1789749, Length=615, Percent_Identity=40.4878048780488, Blast_Score=424, Evalue=1e-120, Organism=Escherichia coli, GI1786685, Length=529, Percent_Identity=27.4102079395085, Blast_Score=152, Evalue=7e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 70696; Mature: 70565
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYFIQAFIYLCAAVIAVPIAKRLGLGSVLGYLMAGVVIGPIIGLVGAETNTLQHFAEF CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GVVMMLFLVGLELEPKMLWNMRNKLIGLGGLQVGLSTLVVMGIALSFGYGWSIALTVGMI HHHHHHHHHCCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FSLSSTAIVLQTFNEKSLTKTEGGKNAFSVLLFQDIAVIPMLAFIPLLALPELVEKAQSV HHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQSAAEHHEELSLVAGLPGWAYGVVVLMAIASVVIGGHYLSRPLFRYVASSGLREIFTAT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ALMLVIGIAALMSLVGLSPALGTFLAGVVLANSEFRHELESNIEPFKGLLLGLFFITVGA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC GINFDVLLSNIGPVMAMTLGVILIKAAVLLVLAFIFKIRGSDRWLFALSLAQAGEFGFVL CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCEEE LSYTVQNHVIPTELAQLLSLVVAISMFLTPGLFILFDKVILPRYEKTENTREPDDIDETG EEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TVIIAGVGRFGQIVNRLLVTNGVKTVVLDHEVQQIENLRKINTKSYYGDATQPDLLHTAG CEEEEECCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC IEQAKMLVIAIDDPERAVGLVEYIKHTHPHVIVMARAFDRRHLYRLRNAGADFMVSETFH CCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHH SALNLGKHALIKLGVHPFKAEQQRATFYETETTHKDTLYEAWKQFTEDDKYLVHYRDMFI HHHHCCHHHHHHCCCCCCCCHHHHHHHEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH QLEETLSEAMKDERYRSFSKVERSWTPPPKENHTEFSKAESD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAYFIQAFIYLCAAVIAVPIAKRLGLGSVLGYLMAGVVIGPIIGLVGAETNTLQHFAEF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GVVMMLFLVGLELEPKMLWNMRNKLIGLGGLQVGLSTLVVMGIALSFGYGWSIALTVGMI HHHHHHHHHCCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FSLSSTAIVLQTFNEKSLTKTEGGKNAFSVLLFQDIAVIPMLAFIPLLALPELVEKAQSV HHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQSAAEHHEELSLVAGLPGWAYGVVVLMAIASVVIGGHYLSRPLFRYVASSGLREIFTAT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ALMLVIGIAALMSLVGLSPALGTFLAGVVLANSEFRHELESNIEPFKGLLLGLFFITVGA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC GINFDVLLSNIGPVMAMTLGVILIKAAVLLVLAFIFKIRGSDRWLFALSLAQAGEFGFVL CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCEEE LSYTVQNHVIPTELAQLLSLVVAISMFLTPGLFILFDKVILPRYEKTENTREPDDIDETG EEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TVIIAGVGRFGQIVNRLLVTNGVKTVVLDHEVQQIENLRKINTKSYYGDATQPDLLHTAG CEEEEECCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC IEQAKMLVIAIDDPERAVGLVEYIKHTHPHVIVMARAFDRRHLYRLRNAGADFMVSETFH CCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHH SALNLGKHALIKLGVHPFKAEQQRATFYETETTHKDTLYEAWKQFTEDDKYLVHYRDMFI HHHHCCHHHHHHCCCCCCCCHHHHHHHEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH QLEETLSEAMKDERYRSFSKVERSWTPPPKENHTEFSKAESD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA