| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961050
Identifier: 157961050
GI number: 157961050
Start: 1486448
End: 1488091
Strand: Reverse
Name: 157961050
Synonym: Spea_1222
Alternate gene names: NA
Gene position: 1488091-1486448 (Counterclockwise)
Preceding gene: 157961051
Following gene: 157961049
Centisome position: 28.76
GC content: 46.65
Gene sequence:
>1644_bases ATGAAAGAGACTTTTTTTCGCAGCATGACTTGGTTGCACACTTGGGTTGGCTTACTCGTATGTTGGATATTATTGCTGGT ATTTTTTGCTGGCACACTCAGTTACTACCGTTATGAGATGACGTTGTGGAGCAAGCCAGAGCTGCATAAAAACGTGTTCC AGCAGTATGACGCTACGAAGGTAACCAATGAACTTGAGCGTGCTCAGCGCTATTTAGAAGAACATGCTCCCGATGCGCGA GACTGGCGAGTTAACTTCCCTACCGACCGTAAGCCCTATATGAGCTACAGCTGGCAAACACAGCCTGAAGAGGGTCAGCG TCGGGGTAAGTTTATTGAGCATATTGCCAGAACTGATTCCGAAGAGTTGGTCACGGAGGTACGCGAATCGAAAGGTGGAC ATTTTTTCTATCGTTTGCACTTTGACCTGCACTACATTCCCGCTAAAGTCGCTCGTTGGATAGTCGGCTTTTGTACCATG TTTATGCTCTTAGCACTGATTAGCGGCATAGTGATCCATAAGCGTATTTTTAAGGATTTTTTCAGCTTTAGACGTAACAA AGGCAGTCGCTCATGGTTAGACGCCCATAATGTCAGCTCAGTGATTGCCCTGCCTTATCACCTGATGATCACTTACACAG GTCTTGTAACGCTGATGGTGATGTATATGCCATGGGGTGTTATTACGGCCTATGATGGCGACTTTAAAGCCTTTAGTAAG GAGTTAAGGCCAAGCAGAGTACAGGTTAGCCCTATAGGCATTGAGGCACAAACGGTATCCTTGAGTACGCTATTACCCGA GGTCAGAGATATCTGGGGTCAAGCCCCGCTCAAACAGGTCGTTGTTAATAACCCAAGCGATCAAAATAGCCGGGTTAATT TCTATAAAGAGACCGGAGAAGCGGTTACTGACAGAAGAACGGCGATTACCTTTAACGGTACCAATGCTGAGTTGCTCAGC CCAGGCATAGAGCCTGAGTCGGGCGCGCATAATACTCATGATACCTTAATTGCCTTGCATACCGGACGCTTCGCAGAGCC TGTGCTGCGCGCACTATTCTTCATTAGTGGCATCTTAGGCTGCGCCATGATTACAACGGGAACATTACTCTGGGCAGTGA AAGTTCGCCAGAAACAACAAAAGCAGATTAAACAAGGTGTGAAAGCCAGTTTGGGCTTACGCCTAGTAGAAGGACTAAAC CTGACTTTCATCACAGGTTTGCCTTTAGCCACTGCGGCCTTCTTCTACGCCAACCGTCTGTTACCTGTCGATCTGGTTAA TCGCGCGCAGTGGGAAGTTAATAGCTTCTTTATCGCACTTGCTTGTGTCGCGTTATTAGCCTGTATCAACCGTACGCTCA CCGCCTGGCGCCTTGTTATGACAGTGACGGCAATAGCCTTAATCGCCATTCCAGTCTTAAACGCATTGACCTCAAATAGT GATTTATTAACTAACATTGCGCAGAAACAGTGGGCTTTAGTGGGCTTTGATTTAATGTGCGTATTTTTCGGGCTCTCGCT TATTTTTGCGCGAACGAAACTTGGTAGCAAACAAGGTGTCATACCAAAAAGAACCGTGAATACACGCAGTGAAAACAATC GGATGAGAGTCAACACCTCATCTGCGACGAAAGAAGGAGTATAG
Upstream 100 bases:
>100_bases TATATGGGCCTTTAGTGTACAGAGCCATTGGCGTGCATTAAGCGATCTTGTGTTACTTAGTGGGCTTTTCTACCTGCTTA CTCTGGCAATAGGTTAAACA
Downstream 100 bases:
>100_bases AGCGTGATCTTAAGTCTATTAGGATTTAGCTACCTCGCATTTGGCTTATTAGCGTTAGCTATGTTCTCTCACTATCGAGA CACTTTTGGCAAGGCTCCGA
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; Iron Uptake Protein; Aspartate Kinase; PepSY-Associated Membrane Protein; Transmembrane Protein; PepSY-Associated TM Helix Family Protein; Iron-Regulated Membrane Protein DUF; Transmembrane PepSY Domain-Containing Protein; PepSY Domain Protein; Pepsy-Associated Tm Helix DomaiN-Containing Protein; Iron Regulated Protein; Pepsy-Associated Tm Helix Domain Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKETFFRSMTWLHTWVGLLVCWILLLVFFAGTLSYYRYEMTLWSKPELHKNVFQQYDATKVTNELERAQRYLEEHAPDAR DWRVNFPTDRKPYMSYSWQTQPEEGQRRGKFIEHIARTDSEELVTEVRESKGGHFFYRLHFDLHYIPAKVARWIVGFCTM FMLLALISGIVIHKRIFKDFFSFRRNKGSRSWLDAHNVSSVIALPYHLMITYTGLVTLMVMYMPWGVITAYDGDFKAFSK ELRPSRVQVSPIGIEAQTVSLSTLLPEVRDIWGQAPLKQVVVNNPSDQNSRVNFYKETGEAVTDRRTAITFNGTNAELLS PGIEPESGAHNTHDTLIALHTGRFAEPVLRALFFISGILGCAMITTGTLLWAVKVRQKQQKQIKQGVKASLGLRLVEGLN LTFITGLPLATAAFFYANRLLPVDLVNRAQWEVNSFFIALACVALLACINRTLTAWRLVMTVTAIALIAIPVLNALTSNS DLLTNIAQKQWALVGFDLMCVFFGLSLIFARTKLGSKQGVIPKRTVNTRSENNRMRVNTSSATKEGV
Sequences:
>Translated_547_residues MKETFFRSMTWLHTWVGLLVCWILLLVFFAGTLSYYRYEMTLWSKPELHKNVFQQYDATKVTNELERAQRYLEEHAPDAR DWRVNFPTDRKPYMSYSWQTQPEEGQRRGKFIEHIARTDSEELVTEVRESKGGHFFYRLHFDLHYIPAKVARWIVGFCTM FMLLALISGIVIHKRIFKDFFSFRRNKGSRSWLDAHNVSSVIALPYHLMITYTGLVTLMVMYMPWGVITAYDGDFKAFSK ELRPSRVQVSPIGIEAQTVSLSTLLPEVRDIWGQAPLKQVVVNNPSDQNSRVNFYKETGEAVTDRRTAITFNGTNAELLS PGIEPESGAHNTHDTLIALHTGRFAEPVLRALFFISGILGCAMITTGTLLWAVKVRQKQQKQIKQGVKASLGLRLVEGLN LTFITGLPLATAAFFYANRLLPVDLVNRAQWEVNSFFIALACVALLACINRTLTAWRLVMTVTAIALIAIPVLNALTSNS DLLTNIAQKQWALVGFDLMCVFFGLSLIFARTKLGSKQGVIPKRTVNTRSENNRMRVNTSSATKEGV >Mature_547_residues MKETFFRSMTWLHTWVGLLVCWILLLVFFAGTLSYYRYEMTLWSKPELHKNVFQQYDATKVTNELERAQRYLEEHAPDAR DWRVNFPTDRKPYMSYSWQTQPEEGQRRGKFIEHIARTDSEELVTEVRESKGGHFFYRLHFDLHYIPAKVARWIVGFCTM FMLLALISGIVIHKRIFKDFFSFRRNKGSRSWLDAHNVSSVIALPYHLMITYTGLVTLMVMYMPWGVITAYDGDFKAFSK ELRPSRVQVSPIGIEAQTVSLSTLLPEVRDIWGQAPLKQVVVNNPSDQNSRVNFYKETGEAVTDRRTAITFNGTNAELLS PGIEPESGAHNTHDTLIALHTGRFAEPVLRALFFISGILGCAMITTGTLLWAVKVRQKQQKQIKQGVKASLGLRLVEGLN LTFITGLPLATAAFFYANRLLPVDLVNRAQWEVNSFFIALACVALLACINRTLTAWRLVMTVTAIALIAIPVLNALTSNS DLLTNIAQKQWALVGFDLMCVFFGLSLIFARTKLGSKQGVIPKRTVNTRSENNRMRVNTSSATKEGV
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62167; Mature: 62167
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETFFRSMTWLHTWVGLLVCWILLLVFFAGTLSYYRYEMTLWSKPELHKNVFQQYDATK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHH VTNELERAQRYLEEHAPDARDWRVNFPTDRKPYMSYSWQTQPEEGQRRGKFIEHIARTDS HHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH EELVTEVRESKGGHFFYRLHFDLHYIPAKVARWIVGFCTMFMLLALISGIVIHKRIFKDF HHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSFRRNKGSRSWLDAHNVSSVIALPYHLMITYTGLVTLMVMYMPWGVITAYDGDFKAFSK HHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH ELRPSRVQVSPIGIEAQTVSLSTLLPEVRDIWGQAPLKQVVVNNPSDQNSRVNFYKETGE HCCCCEEEEEECCCEEHEEHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHCC AVTDRRTAITFNGTNAELLSPGIEPESGAHNTHDTLIALHTGRFAEPVLRALFFISGILG HHHCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH CAMITTGTLLWAVKVRQKQQKQIKQGVKASLGLRLVEGLNLTFITGLPLATAAFFYANRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCC LPVDLVNRAQWEVNSFFIALACVALLACINRTLTAWRLVMTVTAIALIAIPVLNALTSNS CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DLLTNIAQKQWALVGFDLMCVFFGLSLIFARTKLGSKQGVIPKRTVNTRSENNRMRVNTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECC SATKEGV CCCCCCC >Mature Secondary Structure MKETFFRSMTWLHTWVGLLVCWILLLVFFAGTLSYYRYEMTLWSKPELHKNVFQQYDATK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHH VTNELERAQRYLEEHAPDARDWRVNFPTDRKPYMSYSWQTQPEEGQRRGKFIEHIARTDS HHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH EELVTEVRESKGGHFFYRLHFDLHYIPAKVARWIVGFCTMFMLLALISGIVIHKRIFKDF HHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSFRRNKGSRSWLDAHNVSSVIALPYHLMITYTGLVTLMVMYMPWGVITAYDGDFKAFSK HHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH ELRPSRVQVSPIGIEAQTVSLSTLLPEVRDIWGQAPLKQVVVNNPSDQNSRVNFYKETGE HCCCCEEEEEECCCEEHEEHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHCC AVTDRRTAITFNGTNAELLSPGIEPESGAHNTHDTLIALHTGRFAEPVLRALFFISGILG HHHCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH CAMITTGTLLWAVKVRQKQQKQIKQGVKASLGLRLVEGLNLTFITGLPLATAAFFYANRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCC LPVDLVNRAQWEVNSFFIALACVALLACINRTLTAWRLVMTVTAIALIAIPVLNALTSNS CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DLLTNIAQKQWALVGFDLMCVFFGLSLIFARTKLGSKQGVIPKRTVNTRSENNRMRVNTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECC SATKEGV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA