| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yqjG [H]
Identifier: 157961001
GI number: 157961001
Start: 1422022
End: 1423005
Strand: Reverse
Name: yqjG [H]
Synonym: Spea_1173
Alternate gene names: 157961001
Gene position: 1423005-1422022 (Counterclockwise)
Preceding gene: 157961002
Following gene: 157961000
Centisome position: 27.5
GC content: 40.85
Gene sequence:
>984_bases ATGACATCTGTAAAAAATAGTTGGAACAGCAGTATCAAAAATGGCGAGTATCAGCGTAAAGAGTCACAATTTAGAAATTG GATAACCCCCGATGGCAGTGCAGGTATTAGCGGGCGAGAAGGGTTTAAAGCGGAAGCTGACCGTTATCATTTATACGTAT CGCTAGCTTGCCCATGGGCGCATCGCACCTTAGTTTTCCGTCAGCTAAAAGGTTTAGAGAATTTAATTACCGTGAGTGTT GTACACCCTGATATGCATGATAAAGGTTGGAGCTTTAAGCATGATGAAGCATCAGCACAGCTTTATGGCACAACGGGTGA TGATTTATACGGGGATAACTTTATTGGTGAAAAGTACCTGGCTCAAGATCCTGATTACAGCGGCGTGAACAGCGTACCTA TTTTATGGGACAAGAAAAATAACGTCATAGTTAACAATGAATCATCTGAAATTATTCGTATGTTCAATAGTGCTTTTAAT GACATTAGCGGCAATACACTCGATTTTTACCCAGAGCATTTACGGGGAAAAATTGATATCGAGAATGAGCTGGTTTACCA CAAGATTAATAATGGCGTGTACAAAACAGGCTTTGCGACGACCCAAGAAGCATACGATAAGAATGTCACTGCGTTATTTG CAGCACTCGAACAGCTTGACCAGAAGCTTTCGACACAACGTTATTTAACCGGAAATGAACTGACCGAAGCGGACTGGCGC TTGTGGGTTACCTTGGTGCGTTTCGATTCTGTTTACCATACGCACTTTAAATGTAACCTAAAACTAATTGAGCAATACAA CAATATTTATCACTTTATGTTAGAGCTGTACCAAATGCCTAATATTGCTAAAACAGTTAATCAAGCACATATAAAACGCC ATTACTATGCAAGCCATCTAGCAATCAACCCCTACGGTATTGTGCCAATATCCCACAAACAGGATTGGACGGTTGCTCAC ACTAGAGACGAGCAATTTAGCTAA
Upstream 100 bases:
>100_bases TATCTCTAGATAGTGCAATCGCGCAGCGTTTAGCTTAATCAATACAGAGTACCCCCCCAAAATAGCACATTGCTCATCCC CAGAATTAAAGGCACCGACC
Downstream 100 bases:
>100_bases CAACTGGCGAGCAAACGCTCATATTTAAATATTCGATGCTCATACAGCTCATTGATAGCAGACGTTAGCGGCTATTTATC AATGAGGCTTATATTTACAG
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTSVKNSWNSSIKNGEYQRKESQFRNWITPDGSAGISGREGFKAEADRYHLYVSLACPWAHRTLVFRQLKGLENLITVSV VHPDMHDKGWSFKHDEASAQLYGTTGDDLYGDNFIGEKYLAQDPDYSGVNSVPILWDKKNNVIVNNESSEIIRMFNSAFN DISGNTLDFYPEHLRGKIDIENELVYHKINNGVYKTGFATTQEAYDKNVTALFAALEQLDQKLSTQRYLTGNELTEADWR LWVTLVRFDSVYHTHFKCNLKLIEQYNNIYHFMLELYQMPNIAKTVNQAHIKRHYYASHLAINPYGIVPISHKQDWTVAH TRDEQFS
Sequences:
>Translated_327_residues MTSVKNSWNSSIKNGEYQRKESQFRNWITPDGSAGISGREGFKAEADRYHLYVSLACPWAHRTLVFRQLKGLENLITVSV VHPDMHDKGWSFKHDEASAQLYGTTGDDLYGDNFIGEKYLAQDPDYSGVNSVPILWDKKNNVIVNNESSEIIRMFNSAFN DISGNTLDFYPEHLRGKIDIENELVYHKINNGVYKTGFATTQEAYDKNVTALFAALEQLDQKLSTQRYLTGNELTEADWR LWVTLVRFDSVYHTHFKCNLKLIEQYNNIYHFMLELYQMPNIAKTVNQAHIKRHYYASHLAINPYGIVPISHKQDWTVAH TRDEQFS >Mature_326_residues TSVKNSWNSSIKNGEYQRKESQFRNWITPDGSAGISGREGFKAEADRYHLYVSLACPWAHRTLVFRQLKGLENLITVSVV HPDMHDKGWSFKHDEASAQLYGTTGDDLYGDNFIGEKYLAQDPDYSGVNSVPILWDKKNNVIVNNESSEIIRMFNSAFND ISGNTLDFYPEHLRGKIDIENELVYHKINNGVYKTGFATTQEAYDKNVTALFAALEQLDQKLSTQRYLTGNELTEADWRL WVTLVRFDSVYHTHFKCNLKLIEQYNNIYHFMLELYQMPNIAKTVNQAHIKRHYYASHLAINPYGIVPISHKQDWTVAHT RDEQFS
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=320, Percent_Identity=55, Blast_Score=347, Evalue=4e-97, Organism=Saccharomyces cerevisiae, GI6322929, Length=368, Percent_Identity=37.5, Blast_Score=205, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6323906, Length=365, Percent_Identity=36.4383561643836, Blast_Score=200, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6321593, Length=337, Percent_Identity=33.5311572700297, Blast_Score=154, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 37832; Mature: 37700
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVKNSWNSSIKNGEYQRKESQFRNWITPDGSAGISGREGFKAEADRYHLYVSLACPWA CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHH HRTLVFRQLKGLENLITVSVVHPDMHDKGWSFKHDEASAQLYGTTGDDLYGDNFIGEKYL HHHHHHHHHHCHHHEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHH AQDPDYSGVNSVPILWDKKNNVIVNNESSEIIRMFNSAFNDISGNTLDFYPEHLRGKIDI CCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCEEECCHHHCCCEEEE ENELVYHKINNGVYKTGFATTQEAYDKNVTALFAALEQLDQKLSTQRYLTGNELTEADWR CCCEEEEEECCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LWVTLVRFDSVYHTHFKCNLKLIEQYNNIYHFMLELYQMPNIAKTVNQAHIKRHYYASHL EEEEEEHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEE AINPYGIVPISHKQDWTVAHTRDEQFS EECCEEEEECCCCCCCEEEECCCCCCC >Mature Secondary Structure TSVKNSWNSSIKNGEYQRKESQFRNWITPDGSAGISGREGFKAEADRYHLYVSLACPWA CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHH HRTLVFRQLKGLENLITVSVVHPDMHDKGWSFKHDEASAQLYGTTGDDLYGDNFIGEKYL HHHHHHHHHHCHHHEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHH AQDPDYSGVNSVPILWDKKNNVIVNNESSEIIRMFNSAFNDISGNTLDFYPEHLRGKIDI CCCCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCEEECCHHHCCCEEEE ENELVYHKINNGVYKTGFATTQEAYDKNVTALFAALEQLDQKLSTQRYLTGNELTEADWR CCCEEEEEECCCEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LWVTLVRFDSVYHTHFKCNLKLIEQYNNIYHFMLELYQMPNIAKTVNQAHIKRHYYASHL EEEEEEHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEE AINPYGIVPISHKQDWTVAHTRDEQFS EECCEEEEECCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]