| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960981
Identifier: 157960981
GI number: 157960981
Start: 1394863
End: 1395291
Strand: Reverse
Name: 157960981
Synonym: Spea_1153
Alternate gene names: NA
Gene position: 1395291-1394863 (Counterclockwise)
Preceding gene: 157960982
Following gene: 157960980
Centisome position: 26.96
GC content: 40.09
Gene sequence:
>429_bases ATGTGGTCAGTTCAAAGCCACTCAGGCTTTTCAATTCAAGGCGTATTGATGAAGAAATGGTTATTCCCTTTTAAATTAGT GCAACGTAGAAGTGGAATGCCTGAGAGGCTCACGCAGTGCGGGTTTCAAAGCCCTGTATACTGCGTAAGATGCTCTCGAT ATAGAATAACTATTAGCTTCAATCATCCGCCTTGCCTACAGGGCTTTGACTTCCCGCTGAATGATCACATATTTAATGTG ATTGGTATAATGAGCCATTTTAGGCTGGTAATCGTACTTGATGTCATAAAATTACAAGTTCGGGAAGATGGATCCAACTT TCGACCGAATTCTCGCCAAACCCTGCCGATTATTAGAGGAAGATCACACCTTTATTTCATTGCTGTTGGTACTTTAATTA CCAGAAAAGATAACAACTTTGAACATTAA
Upstream 100 bases:
>100_bases AATACTCATCTGAGTCCAACTATTGGGTTTCTGTAGGCCACATGGCATGGAAATCTTTGAATAAACTTGTTTTCAGCAAT TAATACCAATCGTACTAAAT
Downstream 100 bases:
>100_bases GCATAATAGGTGATTCTTATGGCTGCTAAATTTTTTATCCCATCTGTCAATATCTTAGGTCAAGATGCCGTAACTGAAGC CATTGGTGACATCAAGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISFNHPPCLQGFDFPLNDHIFNV IGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRGRSHLYFIAVGTLITRKDNNFEH
Sequences:
>Translated_142_residues MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISFNHPPCLQGFDFPLNDHIFNV IGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRGRSHLYFIAVGTLITRKDNNFEH >Mature_142_residues MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISFNHPPCLQGFDFPLNDHIFNV IGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRGRSHLYFIAVGTLITRKDNNFEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16583; Mature: 16583
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISF CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECEEEEEEEE NHPPCLQGFDFPLNDHIFNVIGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEC RSHLYFIAVGTLITRKDNNFEH CCEEEEEEEEEEEEECCCCCCC >Mature Secondary Structure MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISF CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECEEEEEEEE NHPPCLQGFDFPLNDHIFNVIGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEC RSHLYFIAVGTLITRKDNNFEH CCEEEEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA