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The map label for this gene is yciH [H]

Identifier: 157960961

GI number: 157960961

Start: 1369917

End: 1370246

Strand: Reverse

Name: yciH [H]

Synonym: Spea_1133

Alternate gene names: 157960961

Gene position: 1370246-1369917 (Counterclockwise)

Preceding gene: 157960962

Following gene: 157960960

Centisome position: 26.48

GC content: 44.24

Gene sequence:

>330_bases
ATGAAATCCGATCCAAACGTATCATTAGTCTATAGCACCGATGGCGGCAGAATTGCTCCTGAAAAACAGACCCAATCGGC
ACCGGAAGGTGATGGCATTGTCAGAATTCATAACGATAGCAAAGGCCGTAAAGGCAAAGGCGTTTCAGTGATTAAAGGCC
TTGGCTTACAAGAAAAAGAGCTAAAAGCCTTAGCCCAAAAACTCAAAAAACAGTGCGGCTGCGGCGGTACAGTAAAAGAG
TTCAATATCGAAGTGCAAACCGACAATAGAGAGCAAATTAAGACCCTGCTCGAAAAACTCAATTACACTGTCAAATTGGC
TGGCGGCTAA

Upstream 100 bases:

>100_bases
CATTAACCTGACAAACGAGTAAGTTTCTCTTAACCAGCCTCTCCCGTAACGCTAGCTTCTTTGCTAAACTGGCCACATTA
GTTCACCAGCGACCACTCAA

Downstream 100 bases:

>100_bases
ACTCCCACTTATATGGAAAAGTCTATGGACAGTTTACAAAATCACTTCTTAATCGCTATGCCTTCCTTGCAGGATACCTA
TTTTGAACGTTCATTGATCT

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKSDPNVSLVYSTDGGRIAPEKQTQSAPEGDGIVRIHNDSKGRKGKGVSVIKGLGLQEKELKALAQKLKKQCGCGGTVKE
FNIEVQTDNREQIKTLLEKLNYTVKLAGG

Sequences:

>Translated_109_residues
MKSDPNVSLVYSTDGGRIAPEKQTQSAPEGDGIVRIHNDSKGRKGKGVSVIKGLGLQEKELKALAQKLKKQCGCGGTVKE
FNIEVQTDNREQIKTLLEKLNYTVKLAGG
>Mature_109_residues
MKSDPNVSLVYSTDGGRIAPEKQTQSAPEGDGIVRIHNDSKGRKGKGVSVIKGLGLQEKELKALAQKLKKQCGCGGTVKE
FNIEVQTDNREQIKTLLEKLNYTVKLAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=107, Percent_Identity=54.2056074766355, Blast_Score=110, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11768; Mature: 11768

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDPNVSLVYSTDGGRIAPEKQTQSAPEGDGIVRIHNDSKGRKGKGVSVIKGLGLQEKE
CCCCCCEEEEEECCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCHHH
LKALAQKLKKQCGCGGTVKEFNIEVQTDNREQIKTLLEKLNYTVKLAGG
HHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MKSDPNVSLVYSTDGGRIAPEKQTQSAPEGDGIVRIHNDSKGRKGKGVSVIKGLGLQEKE
CCCCCCEEEEEECCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCHHH
LKALAQKLKKQCGCGGTVKEFNIEVQTDNREQIKTLLEKLNYTVKLAGG
HHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]