| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960545
Identifier: 157960545
GI number: 157960545
Start: 885446
End: 886099
Strand: Direct
Name: 157960545
Synonym: Spea_0717
Alternate gene names: NA
Gene position: 885446-886099 (Clockwise)
Preceding gene: 157960544
Following gene: 157960546
Centisome position: 17.11
GC content: 48.47
Gene sequence:
>654_bases ATGAGCCAAGTAACCGAAACCGCTATCGTAGGCACCAGTGCCTTAATCGAACGTTTGTTAAAAGGCCAGTTTATCTGCCG TACTACCGATGAAGACGGCTGGCGCGCACTGAAAAGCCCATCGACTCGTGAGCATGTTGAGCAGTATCTAAATCAGATTA ACCGCACCATTGGCTCGGCTGGCGAAGGTGAAGTGTTTTTCTGTGGCTATCAGCAGCTAGGCGATGGTGAGCGTAAGGTG ATCTCGTCGCAGTTTAAAGATATCTGTAATGCGCTTATTCCGCTGGTTGAGTGGCTAGTGTTAGTGCAAGAGGGTAGTGG TCAAGATGCGCCATTATCTGAAGGCGTAGCCGTGCGTTTAACTGAGCTGCAAACTCGCATCGAAGACACGCCAGCTTTTC GTGAGCAGTTGGCCAAAATTAGCCATTATCGCCTGTTTGGCTCTACCAGTACTAACGTGGACGCGCAGATAAAACTAGTA TTCAAGCGTTTGGTGGAGCTCGGCTATCTGACACGACCTAACAGCGAGAAGCAGATCTATATCGCTACAGGTAAGCTAGA TTACCTTTATGAGGTGATTCGTTTTATCGATGAGACCGAAGGCTTAAGCCTTGAAGCCCAAGCTGAAACCGCCACTCAAA GGGACTTAATCTAA
Upstream 100 bases:
>100_bases ACATCATCAACAAACAAACTAAGAAACTGCAGGTGGTTAAGCCTCAAGTTAACCCGATCGCCGAGAAACTCAATCAGCGT CGCACTCAGGAGGCCGTGTA
Downstream 100 bases:
>100_bases TATGAGCAGTAACTTACACCAAGCTGGTGTTAAGCTGCTCAAACAGCTTGGACGCCATGCAGAGCTGGTGATGGACGTGT ACTTGTCGGGCTCAGTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSQVTETAIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSAGEGEVFFCGYQQLGDGERKV ISSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRLTELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLV FKRLVELGYLTRPNSEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI
Sequences:
>Translated_217_residues MSQVTETAIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSAGEGEVFFCGYQQLGDGERKV ISSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRLTELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLV FKRLVELGYLTRPNSEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI >Mature_216_residues SQVTETAIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSAGEGEVFFCGYQQLGDGERKVI SSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRLTELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLVF KRLVELGYLTRPNSEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24366; Mature: 24235
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVTETAIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSA CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC GEGEVFFCGYQQLGDGERKVISSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRL CCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH TELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLVFKRLVELGYLTRPNSEKQIY HHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE IATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI EEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC >Mature Secondary Structure SQVTETAIVGTSALIERLLKGQFICRTTDEDGWRALKSPSTREHVEQYLNQINRTIGSA CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC GEGEVFFCGYQQLGDGERKVISSQFKDICNALIPLVEWLVLVQEGSGQDAPLSEGVAVRL CCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH TELQTRIEDTPAFREQLAKISHYRLFGSTSTNVDAQIKLVFKRLVELGYLTRPNSEKQIY HHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE IATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLI EEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA