| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960542
Identifier: 157960542
GI number: 157960542
Start: 878528
End: 879232
Strand: Direct
Name: 157960542
Synonym: Spea_0714
Alternate gene names: NA
Gene position: 878528-879232 (Clockwise)
Preceding gene: 157960534
Following gene: 157960543
Centisome position: 16.98
GC content: 45.25
Gene sequence:
>705_bases ATGTTTTTAAGTTCTTATTTTCAAAAAGAAAATCAATCTGTATCTATCACTCCTCAGCAGGCGAGTGATTTTGCCAAAGT TGTCGCCCAAGACTTCAATCCGATCCATGATGTGGCGGCCAAGCGTTTTTGTGTGCCTGGAGATCTGCTTTTTGCCCTTG TTCTCAATGAATATGGCTTAAGCCAGAAGATGACTTTTAACTTCGCTGGCATGGTTGGCGATGGTGTGAAACTACAGTTT CCTGATGCAGTAGCAGAAGATTTTGATATTCGTGATGACAAAGATAAGTGTTATCTCGAGGTGCATCGCAGCGGCGATGT GCGCCACTGTGAGACCCAAATCGAGTCATTTATTCGCAAGTATGTGGCGTTCTCAGGTCTTAACTTCATGCATATCTTAG TGCCTATGATGAAGCAGCATCAGATGATGATTAATCCGGCTCGCCCTTTGGTGATCTACGAGAGCATGTCATTTGATTTA ACTACCTTGGACTTTAACGAGGTGAGTTTGTCTCTGGTTAAGCAAGAACTCGAGATCGAAGGTAAACGTGGTGATGTAAC CCTGACCTTCGAGCTACTCAGTGGCGATACGGTTGTGGGTACTGGGGTAAAAACCTTGGTCATGAGTGGTCTGCGTCCAT ATGAAGATGAGCCCGCGCAGCAGATGTGTGATGCCTATGAGAGCCGTAGAATCGCTTTCGGTTAA
Upstream 100 bases:
>100_bases CAACACGTTTTATACGGCGCAAGTCATCGGGTGAGTGAAAACTCAATCATGGTATAAACTGTCGGGTCATTTTTATGGCT AACAAGATGTTTGAGTGAAT
Downstream 100 bases:
>100_bases GCTAGCTTCTTTAATAAGCGTGCTTTATCAACGGCTATAAAAGTCAGTTAATAAAAACCACTTAAGCTATTTGGCTTGAG TGGTTTTTTGTTGTTTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MFLSSYFQKENQSVSITPQQASDFAKVVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGLSQKMTFNFAGMVGDGVKLQF PDAVAEDFDIRDDKDKCYLEVHRSGDVRHCETQIESFIRKYVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDL TTLDFNEVSLSLVKQELEIEGKRGDVTLTFELLSGDTVVGTGVKTLVMSGLRPYEDEPAQQMCDAYESRRIAFG
Sequences:
>Translated_234_residues MFLSSYFQKENQSVSITPQQASDFAKVVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGLSQKMTFNFAGMVGDGVKLQF PDAVAEDFDIRDDKDKCYLEVHRSGDVRHCETQIESFIRKYVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDL TTLDFNEVSLSLVKQELEIEGKRGDVTLTFELLSGDTVVGTGVKTLVMSGLRPYEDEPAQQMCDAYESRRIAFG >Mature_234_residues MFLSSYFQKENQSVSITPQQASDFAKVVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGLSQKMTFNFAGMVGDGVKLQF PDAVAEDFDIRDDKDKCYLEVHRSGDVRHCETQIESFIRKYVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDL TTLDFNEVSLSLVKQELEIEGKRGDVTLTFELLSGDTVVGTGVKTLVMSGLRPYEDEPAQQMCDAYESRRIAFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26439; Mature: 26439
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLSSYFQKENQSVSITPQQASDFAKVVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGL CCCHHHHHCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC SQKMTFNFAGMVGDGVKLQFPDAVAEDFDIRDDKDKCYLEVHRSGDVRHCETQIESFIRK CCEEEEEECCCCCCCEEEECCHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH YVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDLTTLDFNEVSLSLVKQELEIE HHHHCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHCC GKRGDVTLTFELLSGDTVVGTGVKTLVMSGLRPYEDEPAQQMCDAYESRRIAFG CCCCCEEEEEEEECCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFLSSYFQKENQSVSITPQQASDFAKVVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGL CCCHHHHHCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC SQKMTFNFAGMVGDGVKLQFPDAVAEDFDIRDDKDKCYLEVHRSGDVRHCETQIESFIRK CCEEEEEECCCCCCCEEEECCHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH YVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDLTTLDFNEVSLSLVKQELEIE HHHHCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHCC GKRGDVTLTFELLSGDTVVGTGVKTLVMSGLRPYEDEPAQQMCDAYESRRIAFG CCCCCEEEEEEEECCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA