| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960500
Identifier: 157960500
GI number: 157960500
Start: 832557
End: 834212
Strand: Direct
Name: 157960500
Synonym: Spea_0672
Alternate gene names: NA
Gene position: 832557-834212 (Clockwise)
Preceding gene: 157960499
Following gene: 157960501
Centisome position: 16.09
GC content: 50.97
Gene sequence:
>1656_bases ATGGAACAGCTGATGACAACTGAACGAAATAAAAAAAACAGCTCGCTTAAGGGGATCGCCTTGCATGGGGTCTTGCTGGG TGTAGTGAGTTTAACTGCTTGTGGCGGCTCAGGTGATGAGGAAACGCCAAAGCCTGAAGAGAAAATTTACCCAGCCTATA CCGACATCAAGGCCTCTGGTGGTGACACCACTACCTTCGATGCATCTGAGTCTGGTCACGGTTTTTCAACCCCAGCTCCT AACTTAAGCGATGAGGAGTTGGCGCTGCACCTTGAAGGTGACTTAAGCTTTGAGACCGCCTTTACCACGGCGCCTAACAG CGCTCACCCAGAGCTAGATGGCCTAGGGCCAGTATTTAATAATGCCGATTGTAACTCTTGCCATCAGCGTGATGGTCGAA ATTCGACCCCCATAGTTGCGAGCGGTGAAACGCGGATTAAGCTAGGGTCAGATGCGGGCATATTCTTAAGAATTAGTCTG GCGCCTAATGAGCCGTGTGTAACAGGTACGGCCGCAAATGATTATTGCGCCCCTATTGCCGTGCCCGATTTTGGTGGGCA GTTGTTTCACCGCGGCGTATTGCAGGCCCGCGATGATTGGCAGCAAAATCAGTTTATTGGTCAGGCTGATGTCTATCTAT CTTATGAAACTAAGCAAGTTAGCTATAGCGATGGCAGCAGTGTTACTTTGAAAAAGCCTAAGTTTGAGGTGGAAAACCCA TACGATGCGCCAGGTGAGACTATGGCGAGCAGTAATCTGACCTCTAATTTGCTGCAAGACGATGTACTCATGGGCTGGCG TAATGGCATGCCAGTGTTTGGCTTAGGCTTGCTAGAGGCTATCTCAGAGGCGGATATTCTAGCCAATGTCGATGCGGTGG ATAGTAATAACGACGGTATATCGGGCCGAGCTAACTATGTCTTCGATGCGATTAAAGCCAAAGCGGGTGATACTAACCCG GTATCGCTCGGCCGTTTTGGCTGGAAGGCCAACACCCCAAGTGTGCGAGTGCAATCACTCGGGGCGTTACGCGGCGATAT GGGGATCACTAACCCCTTATTTCCAGATGAAAGCATTGCCGGTACCGCGCTGCATGACTCCTACTTAGTGCGCACAGGCT TTGTAGATACGGGAGCGGGGATCGATGGTGAACCAGAAGCCAGCGCCGAGTTCAGTGATTCAGTGGTGTTCTACGCCGAG ACTTTAGCCGTCCCTGCTAGACGAAATGTCGATGATCTTGATGTGCGTGAAGGGGCAAGACTGTTCGAGCAGCTTAACTG TACGGGTTGTCATACTCCAAGCTTTGTCACAAAGGCGTCGGGTGATGTTGGCGGCGTGGAGATGAGTGACAGTCATAAGA GTCAAACCATCTATCCTTTCAGTGACATGCTGCTGCATGATATGGGAGAGGGGTTGGCAGATGGTCGTCCAGATTTCTTA GCCGATGGAAACGAGTGGCGCACTCGTCCCTTATGGGGAATAGGCTTGACACAGACCGTTAATCCGCAAGCCGGATTCCT GCACGATGGCCGCGCGGCGACCCTCGAAGAAGCTATCTTATGGCACGGTGGTGAAGCTGAAAAAAGTCAGCAAGATTTTA TGGCGTTAACGGCAGAGGAACGCGCGCAAGTTATTGATTTCTTGATGTCCCTATAA
Upstream 100 bases:
>100_bases TGAGGAGGCCTTAAGGCCTCCTTTTTATTTGGATAATTCCCTTGTTTTTTAGGTGGTTACTTCTAATGCTTTGCAAATAA ACCGCTTAACAATACTGTGT
Downstream 100 bases:
>100_bases TCACAAAATGCATAACTGAAACGCACTCAGTAAACGCAAAAACAGCGGGGCTACCTCTTTTGAGGAGTTTCGCTGTTGAT TTTGTGAGGTAGGTAAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASGGDTTTFDASESGHGFSTPAP NLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFNNADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISL APNEPCVTGTAANDYCAPIAVPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGISGRANYVFDAIKAKAGDTNP VSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIAGTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAE TLAVPARRNVDDLDVREGARLFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEERAQVIDFLMSL
Sequences:
>Translated_551_residues MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASGGDTTTFDASESGHGFSTPAP NLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFNNADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISL APNEPCVTGTAANDYCAPIAVPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGISGRANYVFDAIKAKAGDTNP VSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIAGTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAE TLAVPARRNVDDLDVREGARLFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEERAQVIDFLMSL >Mature_551_residues MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASGGDTTTFDASESGHGFSTPAP NLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFNNADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISL APNEPCVTGTAANDYCAPIAVPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGISGRANYVFDAIKAKAGDTNP VSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIAGTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAE TLAVPARRNVDDLDVREGARLFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEERAQVIDFLMSL
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58962; Mature: 58962
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASG CCCHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEECCC GDTTTFDASESGHGFSTPAPNLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFN CCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCC NADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISLAPNEPCVTGTAANDYCAPIA CCCCCHHHHCCCCCCCCEEECCCCEEEECCCCCEEEEEEECCCCCCEECCCCCCCCCEEE VPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEECCCCCEEEEECCCCCCCCC YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGI CCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHEEECCCCCCCCCCC SGRANYVFDAIKAKAGDTNPVSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIA CCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCC GTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAETLAVPARRNVDDLDVREGAR CCEECCCEEEEECCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH LFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL HHHHCCCCCCCCCCCEEECCCCCCCEEECCCCCCCEECCHHHHHHHHHCCCCCCCCCCCC ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEE CCCCCCCCCCEECCCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH RAQVIDFLMSL HHHHHHHHHCC >Mature Secondary Structure MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASG CCCHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEECCC GDTTTFDASESGHGFSTPAPNLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFN CCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCC NADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISLAPNEPCVTGTAANDYCAPIA CCCCCHHHHCCCCCCCCEEECCCCEEEECCCCCEEEEEEECCCCCCEECCCCCCCCCEEE VPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEECCCCCEEEEECCCCCCCCC YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGI CCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHEEECCCCCCCCCCC SGRANYVFDAIKAKAGDTNPVSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIA CCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCC GTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAETLAVPARRNVDDLDVREGAR CCEECCCEEEEECCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH LFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL HHHHCCCCCCCCCCCEEECCCCCCCEEECCCCCCCEECCHHHHHHHHHCCCCCCCCCCCC ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEE CCCCCCCCCCEECCCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH RAQVIDFLMSL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA